assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001750805.1_ASM175080v1	NZ_CP017385	Klebsiella pneumoniae strain KP36 chromosome, complete genome	1	1021447-1021575	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Unclear	GTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA,NA	NA|194aa|up_9|NZ_CP017385.1_1012801_1013383_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_8|NZ_CP017385.1_1013457_1014225_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_7|NZ_CP017385.1_1014195_1014936_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|448aa|up_6|NZ_CP017385.1_1015347_1016691_+	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|413aa|up_5|NZ_CP017385.1_1016694_1017933_+	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|265aa|up_4|NZ_CP017385.1_1017925_1018720_+	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|213aa|up_3|NZ_CP017385.1_1018712_1019351_+	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|199aa|up_2|NZ_CP017385.1_1019357_1019954_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|408aa|up_1|NZ_CP017385.1_1019966_1021190_+	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|72aa|up_0|NZ_CP017385.1_1021192_1021408_+	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|287aa|down_0|NZ_CP017385.1_1021630_1022491_-	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|352aa|down_1|NZ_CP017385.1_1022650_1023706_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|151aa|down_2|NZ_CP017385.1_1023708_1024161_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|486aa|down_3|NZ_CP017385.1_1024203_1025661_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_4|NZ_CP017385.1_1025918_1026377_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|415aa|down_5|NZ_CP017385.1_1026482_1027727_+	PRK05077, frsA, esterase FrsA	NA|133aa|down_6|NZ_CP017385.1_1027784_1028183_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|231aa|down_7|NZ_CP017385.1_1028268_1028961_-	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|467aa|down_8|NZ_CP017385.1_1029006_1030407_-	PRK10197, PRK10197, GABA permease	NA|428aa|down_9|NZ_CP017385.1_1030542_1031826_-	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase
GCF_001750805.1_ASM175080v1	NZ_CP017385	Klebsiella pneumoniae strain KP36 chromosome, complete genome	2	1451022-1451180	1	PILER-CR	no		DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Orphan	GTAGGCCGGGCAAGCGCAGCGCCGCCCGGCAAAGAGTGCAGG	42	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA,NA	NA|312aa|up_9|NZ_CP017385.1_1436899_1437835_+	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|208aa|up_8|NZ_CP017385.1_1437886_1438510_-	PRK10251, PRK10251, enterobactin synthase subunit EntD	NA|743aa|up_7|NZ_CP017385.1_1438576_1440805_-	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor	NA|403aa|up_6|NZ_CP017385.1_1441064_1442273_+	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|68aa|up_5|NZ_CP017385.1_1442300_1442504_+	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1294aa|up_4|NZ_CP017385.1_1442514_1446396_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|265aa|up_3|NZ_CP017385.1_1446460_1447255_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|331aa|up_2|NZ_CP017385.1_1447251_1448244_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|336aa|up_1|NZ_CP017385.1_1448240_1449248_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|414aa|up_0|NZ_CP017385.1_1449360_1450602_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_0|NZ_CP017385.1_1451211_1452171_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|392aa|down_1|NZ_CP017385.1_1452359_1453535_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|536aa|down_2|NZ_CP017385.1_1453544_1455152_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|284aa|down_3|NZ_CP017385.1_1455165_1456017_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|249aa|down_4|NZ_CP017385.1_1456025_1456772_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|down_5|NZ_CP017385.1_1456772_1457186_+	PRK10254, PRK10254, proofreading thioesterase EntH	NA|702aa|down_6|NZ_CP017385.1_1457542_1459648_+	PRK15015, PRK15015, carbon starvation protein CstA	NA|66aa|down_7|NZ_CP017385.1_1459752_1459950_+	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|101aa|down_8|NZ_CP017385.1_1460325_1460628_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|248aa|down_9|NZ_CP017385.1_1460811_1461555_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
GCF_001750805.1_ASM175080v1	NZ_CP017385	Klebsiella pneumoniae strain KP36 chromosome, complete genome	3	3045569-3046276	2,1,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Type I-E	AGAAACACCCCCACGTGCGTGGGGAAGAC,AGAAACACCCCCACGTGCGTGGGGAAGACN,GAAACACCCCCACGTGCGTGGGGAAGAC	29,30,28	2	2	3045667-3045698|3045667-3045699	NZ_CP017386.1_76511-76542|NZ_CP017386.1_76511-76543	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	11,11,10	11	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA,NA	NA|77aa|up_9|NZ_CP017385.1_3036319_3036550_-	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]	NA|246aa|up_8|NZ_CP017385.1_3036546_3037284_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|220aa|up_7|NZ_CP017385.1_3037333_3037993_-	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|208aa|up_6|NZ_CP017385.1_3037989_3038613_-	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|447aa|up_5|NZ_CP017385.1_3038696_3040037_-	pfam00034, Cytochrom_C, Cytochrome c	NA|595aa|up_4|NZ_CP017385.1_3040047_3041832_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|252aa|up_3|NZ_CP017385.1_3041834_3042590_-	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|124aa|up_2|NZ_CP017385.1_3043091_3043463_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|228aa|up_1|NZ_CP017385.1_3043523_3044207_-	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|372aa|up_0|NZ_CP017385.1_3044217_3045333_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|down_0|NZ_CP017385.1_3046323_3046611_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|down_1|NZ_CP017385.1_3046588_3047464_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|239aa|down_2|NZ_CP017385.1_3047463_3048180_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|down_3|NZ_CP017385.1_3048192_3049227_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|down_4|NZ_CP017385.1_3049256_3049904_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|down_5|NZ_CP017385.1_3049896_3050463_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|down_6|NZ_CP017385.1_3050474_3051998_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|down_7|NZ_CP017385.1_3052001_3054617_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|357aa|down_8|NZ_CP017385.1_3055859_3056930_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|590aa|down_9|NZ_CP017385.1_3056922_3058692_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]
GCF_001750805.1_ASM175080v1	NZ_CP017385	Klebsiella pneumoniae strain KP36 chromosome, complete genome	4	3055029-3055607	3,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Type I-E	AGAAACACCCCCACGCGTGTGGGGAAGAC,GAAACACCCCCACGCGTGTGGGGAAGAC,GAAACACCCCCACGCGTGTGGGGAAGAC	29,28,28	2	2	3055119-3055150|3055119-3055151	NZ_CP017386.1_106421-106390|NZ_CP017386.1_106421-106389	I-E,II-B:I-E,II-B:I-E,II-B	9,9,6	9	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA,NA	NA|228aa|up_9|NZ_CP017385.1_3043523_3044207_-	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|372aa|up_8|NZ_CP017385.1_3044217_3045333_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|up_7|NZ_CP017385.1_3046323_3046611_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|up_6|NZ_CP017385.1_3046588_3047464_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|239aa|up_5|NZ_CP017385.1_3047463_3048180_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|up_4|NZ_CP017385.1_3048192_3049227_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|up_3|NZ_CP017385.1_3049256_3049904_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|up_2|NZ_CP017385.1_3049896_3050463_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|up_1|NZ_CP017385.1_3050474_3051998_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|up_0|NZ_CP017385.1_3052001_3054617_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|357aa|down_0|NZ_CP017385.1_3055859_3056930_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|590aa|down_1|NZ_CP017385.1_3056922_3058692_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|363aa|down_2|NZ_CP017385.1_3058765_3059854_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|360aa|down_3|NZ_CP017385.1_3060156_3061236_+	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|717aa|down_4|NZ_CP017385.1_3061482_3063633_+	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|54aa|down_5|NZ_CP017385.1_3063675_3063837_-	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|400aa|down_6|NZ_CP017385.1_3065128_3066328_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|145aa|down_7|NZ_CP017385.1_3066443_3066878_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|411aa|down_8|NZ_CP017385.1_3067443_3068676_+	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|131aa|down_9|NZ_CP017385.1_3068712_3069105_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
