assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001746735.1_ASM174673v1	NZ_CP013679	Xanthomonas oryzae pv. oryzae strain PXO602, complete genome	1	867936-873010	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3,WYL	Type I-C,Type I-U, Type I-U?	GTTTCAATCCACGCGCCCGTGAGGACGCGAC,GTTTCAATCCACGCGCCCGTGAGGACGCGAC,GTTTCAATCCACGCGCCCGTGAGGACGCGAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	77,77,75	77	TypeI-C,TypeI-U,TypeI-U?	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3,WYL	NA,NA	NA|374aa|up_9|NZ_CP013679.1_853848_854970_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|218aa|up_8|NZ_CP013679.1_854953_855607_+	pfam10741, T2SSM_b, Type II secretion system (T2SS), protein M subtype b	NA|270aa|up_7|NZ_CP013679.1_855596_856406_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|770aa|up_6|NZ_CP013679.1_856402_858712_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|280aa|up_5|NZ_CP013679.1_858708_859548_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|243aa|up_4|NZ_CP013679.1_859971_860700_-	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR	NA|192aa|up_3|NZ_CP013679.1_860805_861381_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|721aa|up_2|NZ_CP013679.1_861756_863919_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|386aa|up_1|NZ_CP013679.1_863954_865112_-	cd05153, HomoserineK_II, Type II Homoserine Kinase	NA|280aa|up_0|NZ_CP013679.1_865722_866562_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	cas2|97aa|down_0|NZ_CP013679.1_873197_873488_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|down_1|NZ_CP013679.1_873502_874537_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|211aa|down_2|NZ_CP013679.1_874539_875172_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|289aa|down_3|NZ_CP013679.1_875191_876058_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|615aa|down_4|NZ_CP013679.1_876054_877899_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|225aa|down_5|NZ_CP013679.1_877895_878570_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|764aa|down_6|NZ_CP013679.1_878697_880989_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|322aa|down_7|NZ_CP013679.1_881100_882066_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|192aa|down_8|NZ_CP013679.1_882456_883032_-	PRK00884, PRK00884, Maf-like protein; Reviewed	NA|170aa|down_9|NZ_CP013679.1_883144_883654_+	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]
GCF_001746735.1_ASM174673v1	NZ_CP013679	Xanthomonas oryzae pv. oryzae strain PXO602, complete genome	2	4130342-4130514	2	CRISPRCasFinder	no		cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3,WYL	Orphan	CGGCGGTCGTCACGGCGGTCGTC	23	0	0	NA	NA	NA	3	3	Orphan	cas3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3,WYL	NA|172aa|up_3|NZ_CP013679.1_4125115_4125631_-,NA|90aa|up_0|NZ_CP013679.1_4129715_4129985_+,NA|115aa|down_1|NZ_CP013679.1_4132729_4133074_+	NA|380aa|up_9|NZ_CP013679.1_4120025_4121165_-	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|201aa|up_8|NZ_CP013679.1_4121161_4121764_-	PRK09289, PRK09289, riboflavin synthase	NA|208aa|up_7|NZ_CP013679.1_4122324_4122948_+	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|370aa|up_6|NZ_CP013679.1_4123003_4124113_-	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|162aa|up_5|NZ_CP013679.1_4124109_4124595_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|175aa|up_4|NZ_CP013679.1_4124591_4125116_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|172aa|up_3|NZ_CP013679.1_4125115_4125631_-	NA	NA|418aa|up_2|NZ_CP013679.1_4125644_4126898_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|785aa|up_1|NZ_CP013679.1_4127083_4129438_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|90aa|up_0|NZ_CP013679.1_4129715_4129985_+	NA	NA|554aa|down_0|NZ_CP013679.1_4130893_4132555_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|115aa|down_1|NZ_CP013679.1_4132729_4133074_+	NA	NA|111aa|down_2|NZ_CP013679.1_4133070_4133403_-	pfam14329, DUF4386, Domain of unknown function (DUF4386)	NA|76aa|down_3|NZ_CP013679.1_4133560_4133788_-	pfam14329, DUF4386, Domain of unknown function (DUF4386)	NA|277aa|down_4|NZ_CP013679.1_4133917_4134748_-	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|370aa|down_5|NZ_CP013679.1_4135449_4136559_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|92aa|down_6|NZ_CP013679.1_4136623_4136899_-	cd10153, RcnR-FrmR-like_DUF156, Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156	NA|367aa|down_7|NZ_CP013679.1_4137783_4138884_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|240aa|down_8|NZ_CP013679.1_4139022_4139742_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|500aa|down_9|NZ_CP013679.1_4139738_4141238_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
