assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001742205.1_ASM174220v1	NZ_CP017151	Limosilactobacillus fermentum strain NCC2970 chromosome, complete genome	1	36210-36392	1	CRISPRCasFinder	no	cas2,cas1	cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	Unclear	ATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATC	39	0	0	NA	NA	NA	2	2	Unclear	cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	NA,NA|156aa|down_0|NZ_CP017151.1_36556_37024_-	NA|119aa|up_9|NZ_CP017151.1_26024_26381_-	pfam14066, DUF4256, Protein of unknown function (DUF4256)	NA|210aa|up_8|NZ_CP017151.1_27422_28052_-	pfam13204, DUF4038, Protein of unknown function (DUF4038)	NA|406aa|up_7|NZ_CP017151.1_28193_29411_-	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|317aa|up_6|NZ_CP017151.1_29510_30461_-	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|236aa|up_5|NZ_CP017151.1_30563_31271_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|372aa|up_4|NZ_CP017151.1_31285_32401_-	COG0213, DeoA, Thymidine phosphorylase [Nucleotide transport and metabolism]	NA|400aa|up_3|NZ_CP017151.1_32405_33605_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|223aa|up_2|NZ_CP017151.1_33617_34286_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	cas2|102aa|up_1|NZ_CP017151.1_34794_35100_-	TIGR01573, cas2, CRISPR-associated endonuclease Cas2	cas1|303aa|up_0|NZ_CP017151.1_35101_36010_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	NA|156aa|down_0|NZ_CP017151.1_36556_37024_-	NA	NA|205aa|down_1|NZ_CP017151.1_37384_37999_+	pfam13518, HTH_28, Helix-turn-helix domain	NA|302aa|down_2|NZ_CP017151.1_37935_38841_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|317aa|down_3|NZ_CP017151.1_38865_39816_-	pfam00665, rve, Integrase core domain	NA|231aa|down_4|NZ_CP017151.1_39740_40433_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|111aa|down_5|NZ_CP017151.1_40758_41091_-	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|122aa|down_6|NZ_CP017151.1_41087_41453_-	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|131aa|down_7|NZ_CP017151.1_41576_41969_+	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins	NA|186aa|down_8|NZ_CP017151.1_42043_42601_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|572aa|down_9|NZ_CP017151.1_42875_44591_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]
GCF_001742205.1_ASM174220v1	NZ_CP017151	Limosilactobacillus fermentum strain NCC2970 chromosome, complete genome	2	1678118-1678238	2	CRISPRCasFinder	no		cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	Orphan	TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATC	45	1	4	1678163-1678193|1678163-1678193|1678163-1678193|1678163-1678193	NZ_CP017151.1_485788-485818|NZ_CP017151.1_490030-490000|NZ_CP017151.1_1031982-1032012|NZ_CP017151.1_1607792-1607822	NA	1	1	Orphan	cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	NA|106aa|up_6|NZ_CP017151.1_1669213_1669531_+,NA|122aa|down_2|NZ_CP017151.1_1680273_1680639_-	NA|446aa|up_9|NZ_CP017151.1_1663586_1664924_-	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|565aa|up_8|NZ_CP017151.1_1664932_1666627_-	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|329aa|up_7|NZ_CP017151.1_1666784_1667771_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|106aa|up_6|NZ_CP017151.1_1669213_1669531_+	NA	NA|391aa|up_5|NZ_CP017151.1_1669683_1670856_+	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|321aa|up_4|NZ_CP017151.1_1672509_1673472_+	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism]	NA|118aa|up_3|NZ_CP017151.1_1673817_1674171_-	pfam06993, DUF1304, Protein of unknown function (DUF1304)	NA|204aa|up_2|NZ_CP017151.1_1674183_1674795_-	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|443aa|up_1|NZ_CP017151.1_1674969_1676298_-	PRK02991, PRK02991, D-serine dehydratase; Provisional	NA|467aa|up_0|NZ_CP017151.1_1676587_1677988_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|96aa|down_0|NZ_CP017151.1_1678243_1678531_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|293aa|down_1|NZ_CP017151.1_1678554_1679433_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|122aa|down_2|NZ_CP017151.1_1680273_1680639_-	NA	NA|349aa|down_3|NZ_CP017151.1_1680764_1681811_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|196aa|down_4|NZ_CP017151.1_1681821_1682409_+	PRK14162, PRK14162, heat shock protein GrpE; Provisional	NA|619aa|down_5|NZ_CP017151.1_1682446_1684303_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|387aa|down_6|NZ_CP017151.1_1684414_1685575_+	PRK14276, PRK14276, chaperone protein DnaJ; Provisional	NA|183aa|down_7|NZ_CP017151.1_1685980_1686529_+	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|56aa|down_8|NZ_CP017151.1_1686556_1686724_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|189aa|down_9|NZ_CP017151.1_1686742_1687309_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional
GCF_001742205.1_ASM174220v1	NZ_CP017151	Limosilactobacillus fermentum strain NCC2970 chromosome, complete genome	3	1748648-1750003	1,3,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	Type II-B,Type II-A,Type II-C	GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC,GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC,GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC,GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	36,36,36,36	0	0	NA	NA	NA:NA:NA:NA	18,20,20,18	20	TypeII-B,TypeII-A,TypeII-C	cas2,cas1,cas14j,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	NA,NA|189aa|down_3|NZ_CP017151.1_1751795_1752362_+,NA|98aa|down_5|NZ_CP017151.1_1754092_1754386_+,NA|114aa|down_8|NZ_CP017151.1_1756212_1756554_+	NA|148aa|up_9|NZ_CP017151.1_1736029_1736473_+	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional	NA|271aa|up_8|NZ_CP017151.1_1736487_1737300_+	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1	NA|214aa|up_7|NZ_CP017151.1_1737361_1738003_-	PRK00043, thiE, thiamine phosphate synthase	NA|266aa|up_6|NZ_CP017151.1_1738167_1738965_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|255aa|up_5|NZ_CP017151.1_1738987_1739752_-	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|656aa|up_4|NZ_CP017151.1_1740197_1742165_+	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein	cas9|1379aa|up_3|NZ_CP017151.1_1742420_1746557_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|302aa|up_2|NZ_CP017151.1_1746762_1747668_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|up_1|NZ_CP017151.1_1747645_1747951_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_0|NZ_CP017151.1_1747947_1748619_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|144aa|down_0|NZ_CP017151.1_1750271_1750703_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|131aa|down_1|NZ_CP017151.1_1750718_1751111_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|77aa|down_2|NZ_CP017151.1_1751235_1751466_-	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|189aa|down_3|NZ_CP017151.1_1751795_1752362_+	NA	NA|318aa|down_4|NZ_CP017151.1_1752546_1753500_-	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|98aa|down_5|NZ_CP017151.1_1754092_1754386_+	NA	NA|321aa|down_6|NZ_CP017151.1_1754441_1755404_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|250aa|down_7|NZ_CP017151.1_1755403_1756153_+	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|114aa|down_8|NZ_CP017151.1_1756212_1756554_+	NA	NA|745aa|down_9|NZ_CP017151.1_1756569_1758804_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]
