assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001729265.1_ASM172926v1	NZ_CP016044	Edwardsiella piscicida strain S11-285 chromosome, complete genome	1	1745682-1746198	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Orphan	AGAAACACCCCCACAGGCGTGGGGAAAAC,GAAACACCCCCACAGGCGTGGGGAA,GAAACACCCCCACAGGCGTGGGGAA	29,25,25	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	8,8,7	8	Orphan	cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA|77aa|up_9|NZ_CP016044.1_1739399_1739630_+,NA|87aa|up_8|NZ_CP016044.1_1739661_1739922_+,NA|116aa|up_5|NZ_CP016044.1_1742470_1742818_+,NA|327aa|down_1|NZ_CP016044.1_1747580_1748561_-,NA|174aa|down_2|NZ_CP016044.1_1748557_1749079_-,NA|133aa|down_4|NZ_CP016044.1_1750453_1750852_+	NA|77aa|up_9|NZ_CP016044.1_1739399_1739630_+	NA	NA|87aa|up_8|NZ_CP016044.1_1739661_1739922_+	NA	NA|313aa|up_7|NZ_CP016044.1_1740123_1741062_+	pfam13730, HTH_36, Helix-turn-helix domain	NA|461aa|up_6|NZ_CP016044.1_1741058_1742441_+	TIGR00665, DnaB, replicative DNA helicase	NA|116aa|up_5|NZ_CP016044.1_1742470_1742818_+	NA	NA|215aa|up_4|NZ_CP016044.1_1742927_1743572_+	pfam07105, DUF1367, Protein of unknown function (DUF1367)	NA|101aa|up_3|NZ_CP016044.1_1743574_1743877_+	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|82aa|up_2|NZ_CP016044.1_1744168_1744414_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|103aa|up_1|NZ_CP016044.1_1744550_1744859_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|110aa|up_0|NZ_CP016044.1_1744848_1745178_-	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|254aa|down_0|NZ_CP016044.1_1746585_1747347_+	COG3561, COG3561, Phage anti-repressor protein [Transcription]	NA|327aa|down_1|NZ_CP016044.1_1747580_1748561_-	NA	NA|174aa|down_2|NZ_CP016044.1_1748557_1749079_-	NA	NA|273aa|down_3|NZ_CP016044.1_1749401_1750220_+	TIGR02642, hypothetical_protein_YPTB1803, uncharacterized phage protein	NA|133aa|down_4|NZ_CP016044.1_1750453_1750852_+	NA	NA|77aa|down_5|NZ_CP016044.1_1750969_1751200_+	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system	NA|110aa|down_6|NZ_CP016044.1_1751174_1751504_+	pfam15781, ParE-like_toxin, ParE-like toxin of type II bacterial toxin-antitoxin system	NA|113aa|down_7|NZ_CP016044.1_1751589_1751928_+	pfam05106, Phage_holin_3_1, Phage holin family (Lysis protein S)	NA|184aa|down_8|NZ_CP016044.1_1751930_1752482_+	COG3926, zliS, Lysozyme family protein [General function prediction only]	NA|261aa|down_9|NZ_CP016044.1_1752662_1753445_+	pfam08346, AntA, AntA/AntB antirepressor
GCF_001729265.1_ASM172926v1	NZ_CP016044	Edwardsiella piscicida strain S11-285 chromosome, complete genome	2	2166729-2166829	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Orphan	ATGCCCCCACCCCGCGCAGGCGCGCCCA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA|243aa|up_6|NZ_CP016044.1_2158374_2159103_+,NA|165aa|down_3|NZ_CP016044.1_2169935_2170430_-	NA|320aa|up_9|NZ_CP016044.1_2153946_2154906_-	PRK01209, cobD, cobalamin biosynthesis protein	NA|460aa|up_8|NZ_CP016044.1_2154902_2156282_-	PRK01077, PRK01077, cobyrinate a,c-diamide synthase	NA|289aa|up_7|NZ_CP016044.1_2156849_2157716_+	COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|243aa|up_6|NZ_CP016044.1_2158374_2159103_+	NA	NA|609aa|up_5|NZ_CP016044.1_2159366_2161193_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|462aa|up_4|NZ_CP016044.1_2161189_2162575_+	PRK11361, PRK11361, acetoacetate metabolism transcriptional regulator AtoC	NA|221aa|up_3|NZ_CP016044.1_2162803_2163466_+	PRK09920, PRK09920, acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Provisional	NA|217aa|up_2|NZ_CP016044.1_2163465_2164116_+	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|441aa|up_1|NZ_CP016044.1_2164112_2165435_+	pfam02667, SCFA_trans, Short chain fatty acid transporter	NA|395aa|up_0|NZ_CP016044.1_2165468_2166653_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|186aa|down_0|NZ_CP016044.1_2167030_2167588_+	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|337aa|down_1|NZ_CP016044.1_2167780_2168791_-	pfam11168, DUF2955, Protein of unknown function (DUF2955)	NA|372aa|down_2|NZ_CP016044.1_2168780_2169896_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|165aa|down_3|NZ_CP016044.1_2169935_2170430_-	NA	NA|272aa|down_4|NZ_CP016044.1_2171414_2172230_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|1901aa|down_5|NZ_CP016044.1_2172254_2177957_+	PRK12316, PRK12316, peptide synthase; Provisional	NA|432aa|down_6|NZ_CP016044.1_2178352_2179648_-	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|240aa|down_7|NZ_CP016044.1_2180005_2180725_-	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|641aa|down_8|NZ_CP016044.1_2181143_2183066_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|319aa|down_9|NZ_CP016044.1_2183787_2184744_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter
GCF_001729265.1_ASM172926v1	NZ_CP016044	Edwardsiella piscicida strain S11-285 chromosome, complete genome	3	2755636-2756091	2,3,2	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	Type I-E	GGAAACACCCCCACGGACGTGGGGAAGAC,GAAACACCCCCACGGACGTGGGGAAGAC,GAAACACCCCCACGGACGTGGGGAAGAC	29,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	7,7,6	7	TypeI-E	cas3,DEDDh,csa3,DinG,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e	NA|108aa|up_7|NZ_CP016044.1_2748795_2749119_+,NA|116aa|up_5|NZ_CP016044.1_2750686_2751034_+,NA|91aa|up_4|NZ_CP016044.1_2751635_2751908_+,NA	NA|69aa|up_9|NZ_CP016044.1_2747694_2747901_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|223aa|up_8|NZ_CP016044.1_2747988_2748657_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|108aa|up_7|NZ_CP016044.1_2748795_2749119_+	NA	NA|313aa|up_6|NZ_CP016044.1_2749751_2750690_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|116aa|up_5|NZ_CP016044.1_2750686_2751034_+	NA	NA|91aa|up_4|NZ_CP016044.1_2751635_2751908_+	NA	NA|222aa|up_3|NZ_CP016044.1_2751904_2752570_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|202aa|up_2|NZ_CP016044.1_2753448_2754054_+	pfam16473, DUF5051, 3' exoribonuclease, RNase T-like	NA|267aa|up_1|NZ_CP016044.1_2754053_2754854_+	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|67aa|up_0|NZ_CP016044.1_2754939_2755140_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	cas2|96aa|down_0|NZ_CP016044.1_2756142_2756430_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|293aa|down_1|NZ_CP016044.1_2756410_2757289_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|238aa|down_2|NZ_CP016044.1_2757292_2758006_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|348aa|down_3|NZ_CP016044.1_2758009_2759053_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|212aa|down_4|NZ_CP016044.1_2759065_2759701_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cse2gr11|175aa|down_5|NZ_CP016044.1_2759697_2760222_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|495aa|down_6|NZ_CP016044.1_2760218_2761703_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|882aa|down_7|NZ_CP016044.1_2761706_2764352_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|226aa|down_8|NZ_CP016044.1_2765768_2766446_+	pfam07077, DUF1345, Protein of unknown function (DUF1345)	NA|236aa|down_9|NZ_CP016044.1_2766596_2767304_+	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR
