assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	1	926466-926557	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP014583.1_915716_915926_-,NA	NA|70aa|up_9|NZ_CP014583.1_915716_915926_-	NA	NA|1321aa|up_8|NZ_CP014583.1_915980_919943_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP014583.1_919982_920621_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP014583.1_920908_922000_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP014583.1_921999_922692_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP014583.1_922703_923090_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP014583.1_923097_923898_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP014583.1_923907_924498_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP014583.1_924508_925003_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP014583.1_925023_926352_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP014583.1_926980_927577_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP014583.1_927597_927825_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP014583.1_927862_929104_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|420aa|down_3|NZ_CP014583.1_929394_930654_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP014583.1_930914_931835_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP014583.1_931834_932140_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP014583.1_932232_932832_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP014583.1_932828_935375_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP014583.1_935374_936547_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP014583.1_936676_937369_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	2	1115608-1115756	2,1	CRISPRCasFinder,PILER-CR	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	ATTTCTAAGCTGCCTGTACGGCAGTGAAC,ATTTCTAAGCTGCCTGTACGGCAGTGAAC	29,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|431aa|up_9|NZ_CP014583.1_1100654_1101947_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP014583.1_1102037_1103381_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP014583.1_1103391_1104003_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1356aa|up_6|NZ_CP014583.1_1104157_1108225_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP014583.1_1108359_1108854_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP014583.1_1109398_1110364_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP014583.1_1110486_1112253_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP014583.1_1112253_1113975_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP014583.1_1114016_1114721_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP014583.1_1115005_1115224_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP014583.1_1115968_1118245_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP014583.1_1118275_1118596_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP014583.1_1118918_1119143_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP014583.1_1119215_1121162_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP014583.1_1121158_1122274_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP014583.1_1122424_1123381_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP014583.1_1123377_1125036_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP014583.1_1125461_1126157_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP014583.1_1126651_1127551_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP014583.1_1127694_1129347_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	3	1254831-1254975	3	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|97aa|up_6|NZ_CP014583.1_1249067_1249358_+,NA|100aa|up_4|NZ_CP014583.1_1250423_1250723_+,NA	NA|74aa|up_9|NZ_CP014583.1_1246766_1246988_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|234aa|up_8|NZ_CP014583.1_1246984_1247686_+	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|390aa|up_7|NZ_CP014583.1_1247852_1249021_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|97aa|up_6|NZ_CP014583.1_1249067_1249358_+	NA	NA|233aa|up_5|NZ_CP014583.1_1249488_1250187_+	PHA02067, PHA02067, hypothetical protein	NA|100aa|up_4|NZ_CP014583.1_1250423_1250723_+	NA	NA|386aa|up_3|NZ_CP014583.1_1250861_1252018_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|81aa|up_2|NZ_CP014583.1_1252056_1252299_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP014583.1_1252276_1253347_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP014583.1_1253481_1254765_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP014583.1_1254998_1257260_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP014583.1_1257442_1258876_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP014583.1_1258951_1260004_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP014583.1_1260187_1261141_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP014583.1_1261181_1262177_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP014583.1_1262331_1263150_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP014583.1_1263150_1264209_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP014583.1_1264211_1264901_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP014583.1_1264900_1265674_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP014583.1_1265838_1265988_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	4	1906876-1907007	4	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	AATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGA	36	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|309aa|up_9|NZ_CP014583.1_1893145_1894072_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|221aa|up_8|NZ_CP014583.1_1894180_1894843_+	PRK10437, PRK10437, carbonic anhydrase; Provisional	NA|179aa|up_7|NZ_CP014583.1_1894883_1895420_-	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional	NA|797aa|up_6|NZ_CP014583.1_1895625_1898016_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|517aa|up_5|NZ_CP014583.1_1898062_1899613_-	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|116aa|up_4|NZ_CP014583.1_1899778_1900126_+	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|289aa|up_3|NZ_CP014583.1_1900231_1901098_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|265aa|up_2|NZ_CP014583.1_1901113_1901908_+	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|121aa|up_1|NZ_CP014583.1_1901944_1902307_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_0|NZ_CP014583.1_1902481_1905079_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|475aa|down_0|NZ_CP014583.1_1907357_1908782_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|631aa|down_1|NZ_CP014583.1_1909106_1910999_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|888aa|down_2|NZ_CP014583.1_1911013_1913677_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|255aa|down_3|NZ_CP014583.1_1913837_1914602_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|458aa|down_4|NZ_CP014583.1_1915142_1916516_+	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|184aa|down_5|NZ_CP014583.1_1917408_1917960_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|298aa|down_6|NZ_CP014583.1_1918047_1918941_+	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase	NA|147aa|down_7|NZ_CP014583.1_1919143_1919584_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|462aa|down_8|NZ_CP014583.1_1919593_1920979_+	PRK10436, PRK10436, hypothetical protein; Provisional	NA|401aa|down_9|NZ_CP014583.1_1920968_1922171_+	PRK10573, PRK10573, protein transport protein HofC
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	5	1969728-1969843	5	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	AACGCCTGATGCGACGCTGACGCGTCTTATC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|393aa|up_9|NZ_CP014583.1_1957787_1958966_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|NZ_CP014583.1_1959067_1959199_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|NZ_CP014583.1_1959287_1960943_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|NZ_CP014583.1_1961106_1962090_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP014583.1_1962065_1963676_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP014583.1_1963659_1964358_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP014583.1_1964427_1965192_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP014583.1_1965277_1966156_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP014583.1_1966494_1968195_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP014583.1_1968205_1969708_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP014583.1_1969907_1970603_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP014583.1_1970677_1973029_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP014583.1_1973192_1976099_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP014583.1_1976110_1976770_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|272aa|down_4|NZ_CP014583.1_1976886_1977702_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_5|NZ_CP014583.1_1977956_1980311_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_6|NZ_CP014583.1_1980363_1981650_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_7|NZ_CP014583.1_1981649_1982639_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_8|NZ_CP014583.1_1982635_1983457_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_9|NZ_CP014583.1_1983459_1983837_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	6	3546002-3546122	6	CRISPRCasFinder	no		cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|55aa|down_0|NZ_CP014583.1_3546192_3546357_-	NA|115aa|up_9|NZ_CP014583.1_3533722_3534067_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP014583.1_3534255_3535194_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP014583.1_3535292_3536282_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP014583.1_3536303_3537635_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP014583.1_3537660_3538869_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP014583.1_3538902_3541197_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP014583.1_3541210_3541600_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP014583.1_3541671_3543036_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP014583.1_3543311_3544643_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP014583.1_3544670_3545981_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP014583.1_3546192_3546357_-	NA	NA|234aa|down_1|NZ_CP014583.1_3546379_3547081_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP014583.1_3547185_3548082_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP014583.1_3548132_3548489_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP014583.1_3548730_3549096_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP014583.1_3549388_3550375_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|131aa|down_6|NZ_CP014583.1_3550444_3550837_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP014583.1_3551022_3551322_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP014583.1_3551311_3551716_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP014583.1_3551718_3552024_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	7	4039124-4039212	7	CRISPRCasFinder	no	cas3	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Unclear	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP014583.1_4037833_4037974_-,NA	NA|434aa|up_9|NZ_CP014583.1_4028530_4029832_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP014583.1_4029879_4032114_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP014583.1_4032191_4032440_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP014583.1_4032439_4032775_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP014583.1_4032845_4033637_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP014583.1_4033864_4035502_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP014583.1_4035589_4036888_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP014583.1_4036947_4037820_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP014583.1_4037833_4037974_-	NA	NA|224aa|up_0|NZ_CP014583.1_4038112_4038784_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP014583.1_4039850_4041329_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP014583.1_4041355_4042633_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP014583.1_4042951_4043737_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP014583.1_4043806_4045261_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP014583.1_4045282_4046692_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP014583.1_4046669_4047449_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP014583.1_4047445_4048306_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP014583.1_4048453_4049029_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP014583.1_4049045_4049306_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP014583.1_4049296_4050568_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001721225.1_ASM172122v1	NZ_CP014583	Escherichia coli strain CFSAN004176 chromosome, complete genome	8	4064927-4065138	2,8,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	TypeI-E	cas3,c2c9_V-U4,DEDDh,DinG,csa3,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|245aa|up_9|NZ_CP014583.1_4054912_4055647_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP014583.1_4055911_4056064_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP014583.1_4056256_4058956_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|520aa|up_6|NZ_CP014583.1_4059053_4060613_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|178aa|up_5|NZ_CP014583.1_4060609_4061143_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|358aa|up_4|NZ_CP014583.1_4061157_4062231_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP014583.1_4062241_4062988_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP014583.1_4062969_4063620_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP014583.1_4063616_4064540_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP014583.1_4064536_4064830_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP014583.1_4065219_4066257_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP014583.1_4066508_4067417_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP014583.1_4067418_4068846_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP014583.1_4068845_4069451_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP014583.1_4069500_4069824_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP014583.1_4070017_4070329_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP014583.1_4070347_4071058_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP014583.1_4071057_4071537_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP014583.1_4071533_4072583_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP014583.1_4072563_4073325_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
