assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001713455.1_ASM171345v1	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	1	17125-17259	1	CRT	no		c2c9_V-U4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csf2gr7,DinG,csf3gr5	Orphan	AATGTTACCGATCGCGCACA	20	0	0	NA	NA	NA	3	3	Orphan	DEDDh,csa3,PD-DExK,cas3,WYL,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csf2gr7,DinG,csf3gr5	NA|221aa|up_9|NZ_CP016463.1_7754_8417_-,NA|318aa|up_8|NZ_CP016463.1_8568_9522_+,NA|432aa|up_6|NZ_CP016463.1_10271_11567_+,NA|84aa|up_5|NZ_CP016463.1_11631_11883_-,NA|310aa|up_4|NZ_CP016463.1_11957_12887_+,NA|161aa|up_2|NZ_CP016463.1_14993_15476_+,NA|289aa|down_0|NZ_CP016463.1_18052_18919_-,NA|121aa|down_1|NZ_CP016463.1_19082_19445_+,NA|128aa|down_2|NZ_CP016463.1_19622_20006_-,NA|87aa|down_5|NZ_CP016463.1_21724_21985_+,NA|222aa|down_6|NZ_CP016463.1_22013_22679_+,NA|80aa|down_7|NZ_CP016463.1_22687_22927_+,NA|154aa|down_8|NZ_CP016463.1_23052_23514_+,NA|243aa|down_9|NZ_CP016463.1_23548_24277_-	NA|221aa|up_9|NZ_CP016463.1_7754_8417_-	NA	NA|318aa|up_8|NZ_CP016463.1_8568_9522_+	NA	NA|208aa|up_7|NZ_CP016463.1_9543_10167_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|432aa|up_6|NZ_CP016463.1_10271_11567_+	NA	NA|84aa|up_5|NZ_CP016463.1_11631_11883_-	NA	NA|310aa|up_4|NZ_CP016463.1_11957_12887_+	NA	NA|631aa|up_3|NZ_CP016463.1_12887_14780_-	pfam14284, PcfJ, PcfJ-like protein	NA|161aa|up_2|NZ_CP016463.1_14993_15476_+	NA	NA|433aa|up_1|NZ_CP016463.1_15487_16786_-	cd17793, HipA, type II toxin-antitoxin sytem toxin HipA and similar proteins	NA|97aa|up_0|NZ_CP016463.1_16797_17088_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|289aa|down_0|NZ_CP016463.1_18052_18919_-	NA	NA|121aa|down_1|NZ_CP016463.1_19082_19445_+	NA	NA|128aa|down_2|NZ_CP016463.1_19622_20006_-	NA	NA|206aa|down_3|NZ_CP016463.1_20083_20701_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|240aa|down_4|NZ_CP016463.1_20772_21492_-	pfam06271, RDD, RDD family	NA|87aa|down_5|NZ_CP016463.1_21724_21985_+	NA	NA|222aa|down_6|NZ_CP016463.1_22013_22679_+	NA	NA|80aa|down_7|NZ_CP016463.1_22687_22927_+	NA	NA|154aa|down_8|NZ_CP016463.1_23052_23514_+	NA	NA|243aa|down_9|NZ_CP016463.1_23548_24277_-	NA
GCF_001713455.1_ASM171345v1	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	2	85796-86739	1,2,1	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	c2c9_V-U4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csf2gr7,DinG,csf3gr5	Type I-E	GGTCCATCCCCGCGCGTGCGGGGGAGCC,GGTCCATCCCCGCGCGTGCGGGGGAGCC,GGTCCATCCCCGCGCGTGCGGGG--GAGCC	28,28,30	0	0	NA	NA	NA:NA	15,15,13	15	TypeI-E	DEDDh,csa3,PD-DExK,cas3,WYL,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csf2gr7,DinG,csf3gr5	NA|219aa|up_9|NZ_CP016463.1_78108_78765_-,NA|179aa|up_6|NZ_CP016463.1_81299_81836_+,NA|178aa|up_5|NZ_CP016463.1_81895_82429_+,NA|125aa|up_4|NZ_CP016463.1_82436_82811_-,NA|117aa|up_3|NZ_CP016463.1_83056_83407_+,NA|127aa|up_1|NZ_CP016463.1_85151_85532_+,NA|81aa|up_0|NZ_CP016463.1_85550_85793_+,cse2gr11|189aa|down_5|NZ_CP016463.1_90636_91203_-,NA|252aa|down_8|NZ_CP016463.1_96671_97427_-	NA|219aa|up_9|NZ_CP016463.1_78108_78765_-	NA	NA|527aa|up_8|NZ_CP016463.1_78866_80447_+	TIGR00763, Lon_protease, endopeptidase La	NA|189aa|up_7|NZ_CP016463.1_80665_81232_+	pfam08805, PilS, PilS N terminal	NA|179aa|up_6|NZ_CP016463.1_81299_81836_+	NA	NA|178aa|up_5|NZ_CP016463.1_81895_82429_+	NA	NA|125aa|up_4|NZ_CP016463.1_82436_82811_-	NA	NA|117aa|up_3|NZ_CP016463.1_83056_83407_+	NA	NA|584aa|up_2|NZ_CP016463.1_83403_85155_+	pfam00176, SNF2_N, SNF2 family N-terminal domain	NA|127aa|up_1|NZ_CP016463.1_85151_85532_+	NA	NA|81aa|up_0|NZ_CP016463.1_85550_85793_+	NA	cas2|105aa|down_0|NZ_CP016463.1_86799_87114_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|297aa|down_1|NZ_CP016463.1_87110_88001_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|258aa|down_2|NZ_CP016463.1_88002_88776_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|237aa|down_3|NZ_CP016463.1_88775_89486_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|374aa|down_4|NZ_CP016463.1_89488_90610_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|189aa|down_5|NZ_CP016463.1_90636_91203_-	NA	cas8e|515aa|down_6|NZ_CP016463.1_91199_92744_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|866aa|down_7|NZ_CP016463.1_92834_95432_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|252aa|down_8|NZ_CP016463.1_96671_97427_-	NA	NA|656aa|down_9|NZ_CP016463.1_97613_99581_+	PTZ00121, PTZ00121, MAEBL; Provisional
GCF_001713455.1_ASM171345v1	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	3	95513-96577	2,3,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	c2c9_V-U4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csf2gr7,DinG,csf3gr5	Type I-E	GGTCCATCCCCGCGCGTGCGGGGGAGAC,GGTCCATCCCCGCGCGTGCGGGGGAGAC,CTCCCCCGCACGCGCGGGGATGGACC,GGTCCATCCCCGCGCGTGCGGGG--GAGAC	28,28,26,30	0	0	NA	NA	N:A	17,17,10,10	17	TypeI-E	DEDDh,csa3,PD-DExK,cas3,WYL,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csf2gr7,DinG,csf3gr5	NA|127aa|up_9|NZ_CP016463.1_85151_85532_+,NA|81aa|up_8|NZ_CP016463.1_85550_85793_+,cse2gr11|189aa|up_2|NZ_CP016463.1_90636_91203_-,NA|252aa|down_0|NZ_CP016463.1_96671_97427_-,NA|98aa|down_5|NZ_CP016463.1_102575_102869_+,NA|135aa|down_6|NZ_CP016463.1_103023_103428_-,NA|200aa|down_7|NZ_CP016463.1_103554_104154_+,NA|226aa|down_8|NZ_CP016463.1_104157_104835_-	NA|127aa|up_9|NZ_CP016463.1_85151_85532_+	NA	NA|81aa|up_8|NZ_CP016463.1_85550_85793_+	NA	cas2|105aa|up_7|NZ_CP016463.1_86799_87114_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|297aa|up_6|NZ_CP016463.1_87110_88001_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|258aa|up_5|NZ_CP016463.1_88002_88776_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|237aa|up_4|NZ_CP016463.1_88775_89486_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|374aa|up_3|NZ_CP016463.1_89488_90610_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|189aa|up_2|NZ_CP016463.1_90636_91203_-	NA	cas8e|515aa|up_1|NZ_CP016463.1_91199_92744_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|866aa|up_0|NZ_CP016463.1_92834_95432_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|252aa|down_0|NZ_CP016463.1_96671_97427_-	NA	NA|656aa|down_1|NZ_CP016463.1_97613_99581_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|297aa|down_2|NZ_CP016463.1_99632_100523_+	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40	NA|233aa|down_3|NZ_CP016463.1_100598_101297_+	pfam03235, DUF262, Protein of unknown function DUF262	NA|346aa|down_4|NZ_CP016463.1_101293_102331_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|98aa|down_5|NZ_CP016463.1_102575_102869_+	NA	NA|135aa|down_6|NZ_CP016463.1_103023_103428_-	NA	NA|200aa|down_7|NZ_CP016463.1_103554_104154_+	NA	NA|226aa|down_8|NZ_CP016463.1_104157_104835_-	NA	NA|706aa|down_9|NZ_CP016463.1_104870_106988_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated
GCF_001713455.1_ASM171345v1	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	4	264278-264733	4,3,4	PILER-CR,CRISPRCasFinder,CRT	no	csf2gr7,DinG,csf3gr5	c2c9_V-U4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csf2gr7,DinG,csf3gr5	Type IV-A	GTCACGCCCCTGCGGGCGTGGGAGAACCG,GTCACGCCCCTGCGGGCGTGGGAGAACCG,GTCACGCCCCTGCGGGCGTGGGAGAACC	29,29,28	0	0	NA	NA	N:A	3,7,7	7	TypeIV-A	DEDDh,csa3,PD-DExK,cas3,WYL,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csf2gr7,DinG,csf3gr5	NA|232aa|up_7|NZ_CP016463.1_256947_257643_+,NA|280aa|up_3|NZ_CP016463.1_259332_260172_+,csf3gr5|236aa|up_0|NZ_CP016463.1_263507_264215_+,NA|696aa|down_6|NZ_CP016463.1_272070_274158_+,NA|107aa|down_9|NZ_CP016463.1_276982_277303_+	NA|90aa|up_9|NZ_CP016463.1_255414_255684_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|430aa|up_8|NZ_CP016463.1_255661_256951_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|232aa|up_7|NZ_CP016463.1_256947_257643_+	NA	NA|139aa|up_6|NZ_CP016463.1_257661_258078_-	TIGR00019, Peptide_chain_release_factor_1, peptide chain release factor 1	NA|37aa|up_5|NZ_CP016463.1_258252_258363_-	pfam03462, PCRF, PCRF domain	NA|235aa|up_4|NZ_CP016463.1_258638_259343_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	NA|280aa|up_3|NZ_CP016463.1_259332_260172_+	NA	csf2gr7|368aa|up_2|NZ_CP016463.1_260180_261284_+	cd09706, Csf2_U, CRISPR/Cas system-associated RAMP superfamily protein Csf2	DinG|742aa|up_1|NZ_CP016463.1_261285_263511_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	csf3gr5|236aa|up_0|NZ_CP016463.1_263507_264215_+	NA	NA|200aa|down_0|NZ_CP016463.1_264877_265477_+	pfam13489, Methyltransf_23, Methyltransferase domain	NA|505aa|down_1|NZ_CP016463.1_265460_266975_-	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|330aa|down_2|NZ_CP016463.1_267096_268086_+	COG5663, COG5663, Uncharacterized conserved protein [Function unknown]	NA|310aa|down_3|NZ_CP016463.1_268060_268990_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|659aa|down_4|NZ_CP016463.1_268989_270966_-	COG5610, COG5610, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|310aa|down_5|NZ_CP016463.1_270965_271895_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|696aa|down_6|NZ_CP016463.1_272070_274158_+	NA	NA|423aa|down_7|NZ_CP016463.1_274154_275423_+	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated	NA|465aa|down_8|NZ_CP016463.1_275479_276874_+	TIGR03022, WbaP_sugtrans, Undecaprenyl-phosphate galactose phosphotransferase, WbaP	NA|107aa|down_9|NZ_CP016463.1_276982_277303_+	NA
GCF_001713455.1_ASM171345v1	NZ_CP016464	Bosea sp. RAC05 chromosome, complete genome	1	1199504-1199619	1	CRISPRCasFinder	no	DEDDh,PD-DExK	DEDDh,csa3,PD-DExK,cas3,WYL	Unclear	GGTCCAGAGCGCGCTTAGAGGGCCTTCCTGTCC	33	0	0	NA	NA	N:A	1	1	Orphan	DEDDh,csa3,PD-DExK,cas3,WYL,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csf2gr7,DinG,csf3gr5	NA|245aa|up_5|NZ_CP016464.1_1190770_1191505_-,NA|392aa|up_3|NZ_CP016464.1_1193269_1194445_+,NA|145aa|up_1|NZ_CP016464.1_1197417_1197852_+,NA|319aa|down_1|NZ_CP016464.1_1201521_1202478_+,NA|302aa|down_2|NZ_CP016464.1_1202575_1203481_+,NA|312aa|down_3|NZ_CP016464.1_1203595_1204531_+,PD-DExK|241aa|down_4|NZ_CP016464.1_1204622_1205345_-	NA|393aa|up_9|NZ_CP016464.1_1187218_1188397_-	pfam05940, NnrS, NnrS protein	NA|233aa|up_8|NZ_CP016464.1_1188718_1189417_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|76aa|up_7|NZ_CP016464.1_1189421_1189649_-	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain	NA|237aa|up_6|NZ_CP016464.1_1189795_1190506_+	pfam07298, NnrU, NnrU protein	NA|245aa|up_5|NZ_CP016464.1_1190770_1191505_-	NA	NA|143aa|up_4|NZ_CP016464.1_1191878_1192307_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|392aa|up_3|NZ_CP016464.1_1193269_1194445_+	NA	NA|819aa|up_2|NZ_CP016464.1_1194796_1197253_+	pfam03389, MobA_MobL, MobA/MobL family	NA|145aa|up_1|NZ_CP016464.1_1197417_1197852_+	NA	DEDDh|472aa|up_0|NZ_CP016464.1_1197857_1199273_+	COG2925, SbcB, Exonuclease I [DNA replication, recombination, and repair]	NA|364aa|down_0|NZ_CP016464.1_1200368_1201460_+	TIGR00763, Lon_protease, endopeptidase La	NA|319aa|down_1|NZ_CP016464.1_1201521_1202478_+	NA	NA|302aa|down_2|NZ_CP016464.1_1202575_1203481_+	NA	NA|312aa|down_3|NZ_CP016464.1_1203595_1204531_+	NA	PD-DExK|241aa|down_4|NZ_CP016464.1_1204622_1205345_-	NA	NA|313aa|down_5|NZ_CP016464.1_1205341_1206280_-	pfam00004, AAA, ATPase family associated with various cellular activities (AAA)	NA|172aa|down_6|NZ_CP016464.1_1206279_1206795_-	pfam18138, bacHORMA_1, Bacterial HORMA domain family 1	NA|321aa|down_7|NZ_CP016464.1_1206802_1207765_-	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme	NA|116aa|down_8|NZ_CP016464.1_1207871_1208219_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|294aa|down_9|NZ_CP016464.1_1208226_1209108_+	pfam06114, Peptidase_M78, IrrE N-terminal-like domain
