assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001712835.1_ASM171283v1	NZ_CP012503	Streptococcus agalactiae strain NGBS357, complete genome	1	1023113-1023742	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Type II-B,Type II-C,Type II-A	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	8,8,9	9	TypeII-B,TypeII-C,TypeII-A	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA,NA|57aa|down_0|NZ_CP012503.1_1023996_1024167_+,NA|261aa|down_9|NZ_CP012503.1_1037394_1038177_-	NA|124aa|up_9|NZ_CP012503.1_1012494_1012866_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_CP012503.1_1012890_1013271_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_CP012503.1_1013362_1014493_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_CP012503.1_1014496_1015234_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_CP012503.1_1015234_1016005_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_CP012503.1_1015994_1016651_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_CP012503.1_1017038_1021151_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|290aa|up_2|NZ_CP012503.1_1021152_1022022_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_CP012503.1_1022018_1022360_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP012503.1_1022346_1023012_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|57aa|down_0|NZ_CP012503.1_1023996_1024167_+	NA	NA|139aa|down_1|NZ_CP012503.1_1024299_1024716_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NZ_CP012503.1_1024851_1026684_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|220aa|down_3|NZ_CP012503.1_1029663_1030323_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_4|NZ_CP012503.1_1030331_1030796_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|145aa|down_5|NZ_CP012503.1_1030795_1031230_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|368aa|down_6|NZ_CP012503.1_1034173_1035277_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|194aa|down_7|NZ_CP012503.1_1035397_1035979_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|204aa|down_8|NZ_CP012503.1_1036746_1037358_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|261aa|down_9|NZ_CP012503.1_1037394_1038177_-	NA
GCF_001712835.1_ASM171283v1	NZ_CP012503	Streptococcus agalactiae strain NGBS357, complete genome	2	1541656-1542465	2	CRT	no		cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Orphan	NGCGCTNGTNCTNGCTGA	18	0	0	NA	NA	NA	13	13	Orphan	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA,NA|117aa|down_5|NZ_CP012503.1_1552605_1552956_+,NA|56aa|down_6|NZ_CP012503.1_1553040_1553208_-	NA|331aa|up_9|NZ_CP012503.1_1528940_1529933_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|513aa|up_8|NZ_CP012503.1_1529929_1531468_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|515aa|up_7|NZ_CP012503.1_1531495_1533040_-	pfam16993, Asp1, Accessory Sec system protein Asp1	NA|410aa|up_6|NZ_CP012503.1_1533039_1534269_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|399aa|up_5|NZ_CP012503.1_1534392_1535589_-	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|296aa|up_4|NZ_CP012503.1_1535649_1536537_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|395aa|up_3|NZ_CP012503.1_1536517_1537702_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|414aa|up_2|NZ_CP012503.1_1537691_1538933_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|402aa|up_1|NZ_CP012503.1_1538929_1540135_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|336aa|up_0|NZ_CP012503.1_1540143_1541151_-	PRK09814, PRK09814, sugar transferase	NA|498aa|down_0|NZ_CP012503.1_1544788_1546282_+	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|664aa|down_1|NZ_CP012503.1_1546379_1548371_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|239aa|down_2|NZ_CP012503.1_1548431_1549148_-	pfam02517, Abi, CAAX protease self-immunity	NA|728aa|down_3|NZ_CP012503.1_1549533_1551717_+	cd13619, PBP2_GlnP, Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily	NA|247aa|down_4|NZ_CP012503.1_1551716_1552457_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|117aa|down_5|NZ_CP012503.1_1552605_1552956_+	NA	NA|56aa|down_6|NZ_CP012503.1_1553040_1553208_-	NA	NA|438aa|down_7|NZ_CP012503.1_1553233_1554547_-	PRK12297, obgE, GTPase CgtA; Reviewed	NA|43aa|down_8|NZ_CP012503.1_1554607_1554736_-	pfam13253, DUF4044, Protein of unknown function (DUF4044)	NA|414aa|down_9|NZ_CP012503.1_1554913_1556155_+	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)
GCF_001712835.1_ASM171283v1	NZ_CP012503	Streptococcus agalactiae strain NGBS357, complete genome	3	2032225-2032410	3	CRT	no		cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Orphan	CTGGCTTANCNTCTGGTT	18	1	1	2032291-2032308	NZ_CP012503.1_2032399-2032416	NA	4	4	Orphan	cas3,DinG,RT,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA|203aa|up_7|NZ_CP012503.1_2021394_2022003_+,NA	NA|1572aa|up_9|NZ_CP012503.1_2014283_2018999_+	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|463aa|up_8|NZ_CP012503.1_2019913_2021302_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|up_7|NZ_CP012503.1_2021394_2022003_+	NA	NA|834aa|up_6|NZ_CP012503.1_2022092_2024594_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|389aa|up_5|NZ_CP012503.1_2024809_2025976_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|416aa|up_4|NZ_CP012503.1_2026417_2027665_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|282aa|up_3|NZ_CP012503.1_2027707_2028553_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|399aa|up_2|NZ_CP012503.1_2028757_2029954_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|402aa|up_1|NZ_CP012503.1_2030018_2031224_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|180aa|up_0|NZ_CP012503.1_2031270_2031810_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|269aa|down_0|NZ_CP012503.1_2033927_2034733_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|58aa|down_1|NZ_CP012503.1_2034974_2035148_-	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|51aa|down_2|NZ_CP012503.1_2035183_2035336_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|774aa|down_3|NZ_CP012503.1_2035384_2037706_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|295aa|down_4|NZ_CP012503.1_2037749_2038634_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|547aa|down_5|NZ_CP012503.1_2038658_2040299_-	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|404aa|down_6|NZ_CP012503.1_2040468_2041680_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|224aa|down_7|NZ_CP012503.1_2041746_2042418_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|401aa|down_8|NZ_CP012503.1_2042447_2043650_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|260aa|down_9|NZ_CP012503.1_2043670_2044450_-	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases
