The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	1819617	1829081	5412960	protease,tRNA	Dickeya_phage(16.67%)	8	NA	NA
WP_002896440.1|1819617_1820733_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
WP_004150848.1|1820729_1822670_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896516.1|1822746_1822968_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_002896520.1|1823293_1823611_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896522.1|1823641_1825921_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_001040187.1|1826041_1826260_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_004141853.1|1826613_1827333_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_012737718.1|1827359_1829081_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
>prophage 2
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	2088288	2097065	5412960	integrase	Salmonella_phage(50.0%)	10	2086594:2086607	2097479:2097492
2086594:2086607	attL	TTTGTACTCTTCCA	NA	NA	NA	NA
WP_004150800.1|2088288_2089539_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
WP_014907831.1|2089656_2090784_-|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	58.1	1.7e-118
WP_012542206.1|2090764_2091010_-	excisionase	NA	NA	NA	NA	NA
WP_014907830.1|2091062_2093201_-	exonuclease	NA	S4TNL0	Salmonella_phage	42.9	3.3e-99
WP_021462580.1|2093342_2093687_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_021462581.1|2093729_2093924_-	DUF1482 family protein	NA	NA	NA	NA	NA
WP_012542200.1|2094766_2095156_-	helix-turn-helix domain-containing protein	NA	A0A0M4R5D1	Salmonella_phage	60.2	6.7e-35
WP_012542199.1|2095257_2095473_+	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	57.5	2.0e-17
WP_014907826.1|2095475_2096030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021462582.1|2096081_2097065_+	hypothetical protein	NA	A0A0U2RT81	Escherichia_phage	56.4	3.3e-46
2097479:2097492	attR	TGGAAGAGTACAAA	NA	NA	NA	NA
>prophage 3
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	3176114	3185528	5412960		Escherichia_phage(87.5%)	9	NA	NA
WP_161283558.1|3176114_3177749_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	55.7	6.9e-182
WP_014907639.1|3177803_3179069_+	MFS transporter	NA	NA	NA	NA	NA
WP_014907640.1|3179099_3180188_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	1.0e-210
WP_014907641.1|3180274_3180535_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	2.1e-40
WP_004176269.1|3180832_3181693_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002210513.1|3181713_3182475_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002903955.1|3182735_3183638_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_004224682.1|3183649_3184915_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.8	7.8e-234
WP_002210516.1|3184907_3185528_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 4
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	3351414	3405361	5412960	tRNA,plate,transposase	Escherichia_phage(22.22%)	49	NA	NA
WP_002902422.1|3351414_3352350_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	93.0	3.5e-138
WP_014907694.1|3352395_3353769_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.7	6.2e-51
WP_004148192.1|3354295_3355279_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_014907695.1|3355558_3356302_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.0	1.3e-15
WP_014907696.1|3356264_3357383_+	oxidoreductase	NA	NA	NA	NA	NA
WP_004176404.1|3357619_3357814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014907697.1|3357926_3358673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014907698.1|3358923_3360303_-	amino acid permease	NA	NA	NA	NA	NA
WP_002902405.1|3360637_3361117_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_004176405.1|3361368_3361983_+	YitT family protein	NA	NA	NA	NA	NA
WP_014907699.1|3362021_3363221_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_014907700.1|3363249_3363918_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014907701.1|3363910_3364924_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.3	2.9e-29
WP_014907702.1|3364932_3365739_-	methionine-binding protein	NA	NA	NA	NA	NA
WP_014907703.1|3365959_3367135_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_014907704.1|3367179_3368214_-	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_004179582.1|3368302_3368851_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014907705.1|3368907_3369819_-	NmrA/HSCARG family protein	NA	NA	NA	NA	NA
WP_014907706.1|3369811_3370681_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_076978328.1|3371377_3371692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004190483.1|3371711_3372617_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014907708.1|3372755_3373685_+	aromatic alcohol reductase	NA	NA	NA	NA	NA
WP_004212334.1|3373710_3373917_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_015874735.1|3373967_3374846_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_004151596.1|3375004_3375760_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014907710.1|3375764_3376358_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014907711.1|3376431_3377145_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014907712.1|3377211_3377706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004176417.1|3377832_3378375_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_004190503.1|3378352_3379438_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_004190505.1|3379401_3381156_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_015874733.1|3381232_3381703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014907714.1|3381699_3382755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014907715.1|3382785_3384384_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_049127998.1|3384383_3387839_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_032430730.1|3387835_3389044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014907718.1|3390313_3391384_-	TIGR02594 family protein	NA	B5SP49	Lactococcus_phage	33.3	2.5e-07
WP_086074293.1|3391370_3392165_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	30.4	1.9e-07
WP_015874727.1|3392215_3392407_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_015874726.1|3392378_3392483_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_023157869.1|3392651_3393173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015874724.1|3393169_3395092_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7HER1	Arthrobacter_phage	39.8	1.7e-06
WP_064175886.1|3395109_3395520_-	DUF4431 domain-containing protein	NA	NA	NA	NA	NA
WP_041168969.1|3395522_3398222_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.6	8.5e-20
WP_014907724.1|3398214_3400869_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	8.5e-97
WP_002902160.1|3401132_3401624_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_014907726.1|3401628_3403335_-	OmpA family protein	NA	NA	NA	NA	NA
WP_004176431.1|3403331_3404021_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_004224345.1|3404017_3405361_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 5
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	3583801	3661414	5412960	tRNA,tail,head,terminase,portal,capsid,holin	Klebsiella_phage(53.85%)	84	NA	NA
WP_002901088.1|3583801_3584302_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
WP_002901080.1|3584419_3584866_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_004140469.1|3584849_3585644_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014907798.1|3585751_3586927_+	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_014907799.1|3586958_3587651_-	CTP synthase	NA	NA	NA	NA	NA
WP_004150778.1|3587796_3588306_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_014343000.1|3588310_3588649_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_004176548.1|3588638_3588878_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_004176549.1|3589178_3590192_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.9e-12
WP_004150782.1|3590249_3590351_+	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_004213093.1|3590350_3590425_+	protein YoaJ	NA	NA	NA	NA	NA
WP_004140488.1|3590542_3590668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140489.1|3590726_3590990_-	DUF2534 family protein	NA	NA	NA	NA	NA
WP_004150783.1|3591120_3591759_-	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004148038.1|3591848_3592763_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_004148037.1|3593224_3593344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014907800.1|3593424_3594468_-	type II asparaginase	NA	NA	NA	NA	NA
WP_004140494.1|3594770_3595979_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_014907801.1|3596052_3597837_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
WP_004150788.1|3597843_3598734_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004140497.1|3598854_3600363_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_020804938.1|3600396_3600561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150790.1|3600673_3601360_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004140501.1|3601757_3601937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150791.1|3601976_3602609_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_004140506.1|3603175_3603373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014907802.1|3603488_3604499_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_004140511.1|3604495_3605902_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004140512.1|3605957_3606845_-	manganese catalase family protein	NA	NA	NA	NA	NA
WP_004140514.1|3606861_3607368_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004148027.1|3607394_3607889_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150795.1|3607979_3608165_-	general stress protein	NA	NA	NA	NA	NA
WP_032421220.1|3608384_3608720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140529.1|3608787_3609981_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004140530.1|3610093_3610321_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
WP_032415655.1|3610474_3610651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014907803.1|3610770_3611094_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_004150798.1|3611086_3611479_+	amino acid-binding protein	NA	NA	NA	NA	NA
WP_004213085.1|3611475_3612189_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004892953.1|3612461_3612614_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
WP_014228923.1|3613262_3613955_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004224164.1|3614309_3615368_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	31.7	2.1e-14
WP_014907806.1|3615790_3617218_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	55.5	3.0e-101
WP_014907807.1|3617286_3629991_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.0	0.0e+00
WP_014228919.1|3630053_3630665_-|tail	tail assembly protein	tail	Q6UAW2	Klebsiella_phage	72.5	5.3e-71
WP_021462612.1|3630680_3631031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014228918.1|3631062_3631773_-	C40 family peptidase	NA	Q6UAW4	Klebsiella_phage	89.8	1.4e-136
WP_014907809.1|3631774_3632530_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	81.3	1.2e-125
WP_014228916.1|3632526_3632865_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	89.3	8.3e-58
WP_041169041.1|3632864_3636200_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	87.6	0.0e+00
WP_071582693.1|3636199_3636412_-	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	87.5	4.1e-31
WP_014228914.1|3636432_3636798_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
WP_014228913.1|3636855_3637317_-|tail	major tail shaft subunit	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
WP_017898997.1|3637348_3637750_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	1.7e-62
WP_014907812.1|3637746_3638136_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	85.3	1.1e-56
WP_014228910.1|3638116_3638455_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	91.1	5.6e-54
WP_041168975.1|3638451_3638769_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	88.8	2.6e-45
WP_014907814.1|3638749_3639010_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	63.9	1.5e-22
WP_014228907.1|3639068_3640355_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.3	4.4e-216
WP_014907815.1|3640432_3641353_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
WP_012542166.1|3641389_3642649_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	90.2	2.8e-223
WP_032418045.1|3642648_3642828_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	4.0e-11
WP_012542167.1|3642821_3644543_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.1e-190
WP_012542168.1|3644542_3644977_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
WP_032750167.1|3645225_3645654_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.4e-41
WP_014907819.1|3645653_3645977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041168976.1|3645928_3646291_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	82.5	1.3e-56
WP_162838183.1|3646274_3646439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032749552.1|3646617_3646842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065888617.1|3646880_3647318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041168977.1|3648266_3648617_-	hypothetical protein	NA	A0A0K2FIW3	Enterobacter_phage	37.7	6.0e-11
WP_023159886.1|3648613_3649111_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	86.4	4.3e-79
WP_021462597.1|3649110_3649326_-|holin	holin	holin	A5LH82	Enterobacteria_phage	87.3	1.0e-29
WP_077260858.1|3650337_3650778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020317678.1|3650782_3651652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014228895.1|3651680_3652025_-	antitermination protein	NA	A0A0P0ZCW0	Stx2-converting_phage	85.0	1.0e-55
WP_014907821.1|3652037_3653069_-	DUF968 domain-containing protein	NA	S5MW46	Escherichia_phage	49.3	1.8e-95
WP_051017642.1|3653268_3653661_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	6.1e-12
WP_071599446.1|3653701_3653941_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	58.6	1.5e-16
WP_012542186.1|3654003_3654237_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	1.7e-25
WP_004178082.1|3654315_3655803_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004153104.1|3656319_3657483_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	NA	B6DZZ7	Stx2-converting_phage	80.6	2.2e-182
WP_004899361.1|3657663_3659088_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
WP_014907247.1|3659311_3661414_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.9	2.8e-63
>prophage 6
NZ_CP016813	Klebsiella pneumoniae strain ED2 chromosome, complete genome	5412960	3735240	3742145	5412960	tRNA	Bacillus_phage(33.33%)	6	NA	NA
WP_004149058.1|3735240_3736719_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
WP_004175198.1|3736715_3737438_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_004144192.1|3737756_3739118_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004151134.1|3739360_3740257_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004180550.1|3740497_3741271_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_004180551.1|3741281_3742145_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
