assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001705995.2_ASM170599v2	NZ_CP049045	Pseudomonas sp. BIOMIG1BAC chromosome, complete genome	1	665633-665737	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	Orphan	CCCCAAAACCGTGGCCTGCTCGCTTG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	NA|147aa|up_0|NZ_CP049045.1_665158_665599_+,NA|150aa|down_3|NZ_CP049045.1_670091_670541_-	NA|252aa|up_9|NZ_CP049045.1_657160_657916_+	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]	NA|270aa|up_8|NZ_CP049045.1_657993_658803_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|437aa|up_7|NZ_CP049045.1_658901_660212_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|429aa|up_6|NZ_CP049045.1_660243_661530_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|510aa|up_5|NZ_CP049045.1_661665_663195_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|138aa|up_4|NZ_CP049045.1_663345_663759_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|85aa|up_3|NZ_CP049045.1_663758_664013_+	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|161aa|up_2|NZ_CP049045.1_664054_664537_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|152aa|up_1|NZ_CP049045.1_664704_665160_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|147aa|up_0|NZ_CP049045.1_665158_665599_+	NA	NA|479aa|down_0|NZ_CP049045.1_666107_667544_-	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|362aa|down_1|NZ_CP049045.1_667540_668626_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|378aa|down_2|NZ_CP049045.1_668989_670123_+	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|150aa|down_3|NZ_CP049045.1_670091_670541_-	NA	NA|185aa|down_4|NZ_CP049045.1_670602_671157_-	PRK09269, PRK09269, chorismate mutase; Provisional	NA|469aa|down_5|NZ_CP049045.1_671307_672714_-	PRK09469, glnA, glutamate--ammonia ligase	NA|485aa|down_6|NZ_CP049045.1_673045_674500_+	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional	NA|607aa|down_7|NZ_CP049045.1_674639_676460_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|148aa|down_8|NZ_CP049045.1_676730_677174_-	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|817aa|down_9|NZ_CP049045.1_677443_679894_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins
GCF_001705995.2_ASM170599v2	NZ_CP049045	Pseudomonas sp. BIOMIG1BAC chromosome, complete genome	2	1196774-1197042	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,4	4	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	NA|124aa|up_6|NZ_CP049045.1_1187116_1187488_+,NA|126aa|up_0|NZ_CP049045.1_1196031_1196409_+,NA	NA|187aa|up_9|NZ_CP049045.1_1183350_1183911_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|279aa|up_8|NZ_CP049045.1_1183907_1184744_+	COG3725, AmpE, Membrane protein required for beta-lactamase induction [Defense mechanisms]	NA|677aa|up_7|NZ_CP049045.1_1184920_1186951_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|124aa|up_6|NZ_CP049045.1_1187116_1187488_+	NA	NA|264aa|up_5|NZ_CP049045.1_1187473_1188265_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|332aa|up_4|NZ_CP049045.1_1188268_1189264_-	PRK11303, PRK11303, catabolite repressor/activator	NA|954aa|up_3|NZ_CP049045.1_1189562_1192424_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|314aa|up_2|NZ_CP049045.1_1192423_1193365_+	TIGR03828, pfkB, 1-phosphofructokinase	NA|586aa|up_1|NZ_CP049045.1_1193376_1195134_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|126aa|up_0|NZ_CP049045.1_1196031_1196409_+	NA	NA|514aa|down_0|NZ_CP049045.1_1197272_1198814_+	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|844aa|down_1|NZ_CP049045.1_1198925_1201457_-	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|768aa|down_2|NZ_CP049045.1_1201609_1203913_-	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|227aa|down_3|NZ_CP049045.1_1204121_1204802_+	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|262aa|down_4|NZ_CP049045.1_1204805_1205591_+	sd00010, SLR, Sel1-like repeat	NA|88aa|down_5|NZ_CP049045.1_1205645_1205909_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|93aa|down_6|NZ_CP049045.1_1205905_1206184_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|388aa|down_7|NZ_CP049045.1_1206261_1207425_-	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase	NA|386aa|down_8|NZ_CP049045.1_1208102_1209260_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|223aa|down_9|NZ_CP049045.1_1209256_1209925_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]
GCF_001705995.2_ASM170599v2	NZ_CP049045	Pseudomonas sp. BIOMIG1BAC chromosome, complete genome	3	6385578-6385672	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	Orphan	CCGCCACCCACGGCACCGGCCAC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	NA,NA|266aa|down_6|NZ_CP049045.1_6393059_6393857_+,NA|184aa|down_8|NZ_CP049045.1_6394190_6394742_+,NA|108aa|down_9|NZ_CP049045.1_6394738_6395062_+	NA|114aa|up_9|NZ_CP049045.1_6377004_6377346_-	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|621aa|up_8|NZ_CP049045.1_6377349_6379212_-	PRK05183, hscA, chaperone protein HscA; Provisional	NA|174aa|up_7|NZ_CP049045.1_6379263_6379785_-	PRK00294, hscB, co-chaperone HscB; Provisional	NA|108aa|up_6|NZ_CP049045.1_6379793_6380117_-	PRK09502, iscA, iron-sulfur cluster assembly protein IscA	NA|129aa|up_5|NZ_CP049045.1_6380159_6380546_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_4|NZ_CP049045.1_6380639_6381854_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|164aa|up_3|NZ_CP049045.1_6381904_6382396_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|259aa|up_2|NZ_CP049045.1_6382632_6383409_-	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase	NA|257aa|up_1|NZ_CP049045.1_6383408_6384179_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|273aa|up_0|NZ_CP049045.1_6384403_6385222_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|305aa|down_0|NZ_CP049045.1_6386016_6386931_-	PRK13022, secF, protein translocase subunit SecF	NA|623aa|down_1|NZ_CP049045.1_6386940_6388809_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|113aa|down_2|NZ_CP049045.1_6388871_6389210_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|372aa|down_3|NZ_CP049045.1_6389256_6390372_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|355aa|down_4|NZ_CP049045.1_6390386_6391451_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|403aa|down_5|NZ_CP049045.1_6391851_6393060_+	PRK09692, PRK09692, integrase; Provisional	NA|266aa|down_6|NZ_CP049045.1_6393059_6393857_+	NA	NA|75aa|down_7|NZ_CP049045.1_6393966_6394191_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|184aa|down_8|NZ_CP049045.1_6394190_6394742_+	NA	NA|108aa|down_9|NZ_CP049045.1_6394738_6395062_+	NA
GCF_001705995.2_ASM170599v2	NZ_CP049045	Pseudomonas sp. BIOMIG1BAC chromosome, complete genome	4	7655585-7655671	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	Orphan	GGTTACTTCAATGGAAAGAACTAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK,WYL,PrimPol,RT	NA,NA|162aa|down_0|NZ_CP049045.1_7655888_7656374_+,NA|373aa|down_1|NZ_CP049045.1_7656653_7657772_-,NA|113aa|down_4|NZ_CP049045.1_7659784_7660123_+	NA|277aa|up_9|NZ_CP049045.1_7646566_7647397_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|242aa|up_8|NZ_CP049045.1_7647410_7648136_+	pfam04340, DUF484, Protein of unknown function, DUF484	NA|299aa|up_7|NZ_CP049045.1_7648138_7649035_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|234aa|up_6|NZ_CP049045.1_7649034_7649736_+	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA|108aa|up_5|NZ_CP049045.1_7649827_7650151_-	pfam02724, CDC45, CDC45-like protein	NA|142aa|up_4|NZ_CP049045.1_7650253_7650679_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|446aa|up_3|NZ_CP049045.1_7650888_7652226_-	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|113aa|up_2|NZ_CP049045.1_7652261_7652600_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|87aa|up_1|NZ_CP049045.1_7653012_7653273_+	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown]	NA|288aa|up_0|NZ_CP049045.1_7653430_7654294_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|162aa|down_0|NZ_CP049045.1_7655888_7656374_+	NA	NA|373aa|down_1|NZ_CP049045.1_7656653_7657772_-	NA	NA|54aa|down_2|NZ_CP049045.1_7657863_7658025_+	pfam07865, DUF1652, Protein of unknown function (DUF1652)	NA|241aa|down_3|NZ_CP049045.1_7659012_7659735_+	cd05233, SDR_c, classical (c) SDRs	NA|113aa|down_4|NZ_CP049045.1_7659784_7660123_+	NA	NA|500aa|down_5|NZ_CP049045.1_7660226_7661726_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|268aa|down_6|NZ_CP049045.1_7661718_7662522_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|228aa|down_7|NZ_CP049045.1_7664468_7665152_-	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|202aa|down_8|NZ_CP049045.1_7665895_7666501_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|338aa|down_9|NZ_CP049045.1_7666527_7667541_+	pfam13748, ABC_membrane_3, ABC transporter transmembrane region
