The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	100633	227836	4232635	portal,head,plate,capsid,transposase,tail,holin,tRNA,terminase	Stenotrophomonas_phage(37.5%)	106	NA	NA
WP_002801519.1|100633_101440_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002804964.1|101774_102047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762454.1|109101_109878_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002804959.1|110185_111595_+	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_002801519.1|111771_112578_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_065975000.1|112665_113205_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
WP_040762361.1|113427_113862_+	VirK family protein	NA	NA	NA	NA	NA
WP_088056659.1|113883_114682_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002804609.1|116228_116561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804610.1|116655_117948_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	1.6e-48
WP_002804956.1|118188_119655_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_002804953.1|119651_120035_-	variant SH3 domain protein	NA	NA	NA	NA	NA
WP_002804952.1|120036_121107_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_002804951.1|121099_122188_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
WP_002804950.1|123011_123944_+	tryptophan 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_002804948.1|124135_125656_+	MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.9	6.0e-63
WP_002804946.1|125667_126258_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_002804237.1|127234_127723_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002804236.1|127890_128961_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
WP_065975001.1|129293_130598_+	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_002804234.1|130908_131019_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002804226.1|132590_133529_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_040762320.1|133644_134223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002804224.1|134225_135011_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002804223.1|135031_136015_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.4	7.1e-25
WP_082244199.1|136089_136923_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_002804216.1|137259_138822_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002804214.1|138853_139600_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.3	4.7e-21
WP_002804213.1|139596_140790_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002804212.1|140895_141885_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_002804209.1|143577_146595_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_002804208.1|146847_147537_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002804167.1|148987_149884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108772814.1|149890_150172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762278.1|150381_151281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762276.1|151719_152622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082244198.1|152628_152910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975007.1|153059_153959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762269.1|153965_154580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145954031.1|155524_157264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052032096.1|157256_158204_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_083215097.1|158216_160592_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.2	2.3e-29
WP_145954032.1|160620_161565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145954033.1|161607_164238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809128.1|164311_165115_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_083215063.1|165168_167190_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.3	4.6e-26
WP_065975011.1|167196_169200_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_083215098.1|169205_169640_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_083215099.1|169814_170249_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_083215100.1|170423_170858_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_108772813.1|171022_171901_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_065975013.1|171907_174667_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.1	4.9e-39
WP_082244266.1|175665_176289_+	RelA/SpoT domain-containing protein	NA	A0A1B0VBT5	Salmonella_phage	34.9	8.2e-19
WP_040762705.1|176847_177921_-	ParA family protein	NA	H2BD62	Pseudomonas_phage	30.5	9.8e-36
WP_002809134.1|178001_178715_-	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	76.3	1.5e-104
WP_002809135.1|178632_178878_-	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	53.8	2.2e-15
WP_002809136.1|178903_179917_-|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	73.1	2.1e-141
WP_002809137.1|179916_181701_-|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	76.5	9.5e-270
WP_002809139.1|181822_182665_+|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	53.6	2.6e-68
WP_002809141.1|182723_183740_+|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	71.4	2.9e-138
WP_002809148.1|183743_184463_+|terminase	phage-related terminase	terminase	Q9ZXM2	Pseudomonas_virus	62.8	1.3e-68
WP_002809166.1|184558_185026_+|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	3.2e-31
WP_002809167.1|185025_185235_+|tail	tail protein X	tail	K4PAW7	Burkholderia_phage	58.0	5.9e-14
WP_002809170.1|185239_185596_+	hypothetical protein	NA	V9IQG9	Stenotrophomonas_phage	55.3	1.7e-21
WP_002809171.1|185588_185864_+|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_002809173.1|186496_186973_+	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	51.4	1.4e-23
WP_002809175.1|186969_187389_+|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	65.2	4.4e-40
WP_002809177.1|187376_187835_+	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	57.2	1.7e-37
WP_002809178.1|187874_188087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145954034.1|188122_188809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040762711.1|188966_189857_+|plate	baseplate J/gp47 family protein	plate	V9IQV9	Stenotrophomonas_phage	53.0	2.1e-84
WP_082244268.1|189849_190398_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	53.1	2.1e-50
WP_002809184.1|190401_191607_+	hypothetical protein	NA	A0A1S5NTG6	Burkholderia_phage	45.6	1.6e-31
WP_002809187.1|191608_191836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002809189.1|191914_192478_+|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	47.5	2.8e-26
WP_002809191.1|192474_192834_+	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	65.3	4.3e-36
WP_002809193.1|192845_194012_+|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	63.7	4.5e-135
WP_002809195.1|194042_194552_+|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	76.9	2.2e-70
WP_002809198.1|194597_194900_+|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	67.4	3.7e-25
WP_002809201.1|194908_195022_+|tail	GpE family phage tail protein	tail	Q858U8	Yersinia_virus	66.7	3.2e-06
WP_002809205.1|195051_197922_+|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	47.7	3.3e-195
WP_002809207.1|197934_198333_+|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	60.8	8.6e-38
WP_145954035.1|199848_200787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975015.1|201205_202531_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	6.1e-80
WP_065975460.1|202620_203988_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	62.8	1.2e-78
WP_002809331.1|205480_205726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809332.1|205989_207867_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	4.1e-37
WP_002809334.1|207972_208413_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002809336.1|208513_209428_+	lauroyl acyltransferase	NA	NA	NA	NA	NA
WP_002809337.1|209494_210016_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_002809338.1|210249_211383_+	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	40.9	4.2e-29
WP_082244271.1|211630_212230_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_002809341.1|212226_213729_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_002809344.1|213802_214858_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_002809346.1|214861_215686_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002809348.1|215795_217073_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_002809350.1|217236_218958_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_002809352.1|219007_220318_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_065975017.1|220317_221241_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_002809356.1|221616_222129_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.1	3.4e-18
WP_002809358.1|222260_223397_+	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.1	9.8e-10
WP_002809360.1|223471_224608_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002809362.1|224651_225125_+	DUF494 family protein	NA	NA	NA	NA	NA
WP_082244272.1|225250_225550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088057059.1|225822_226620_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002801519.1|227029_227836_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	292061	352581	4232635	transposase,tRNA	Acidithiobacillus_phage(20.0%)	45	NA	NA
WP_088079898.1|292061_293206_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	57.3	3.2e-85
WP_040762751.1|294039_294333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762723.1|296183_296432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002809491.1|297170_298286_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002809514.1|300419_301709_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002809516.1|302037_302172_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_002809518.1|302251_302404_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_002809521.1|302512_303436_-	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.5	2.9e-28
WP_088056924.1|305454_306253_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_065975027.1|307180_308548_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	64.0	5.7e-81
WP_002809527.1|309520_310204_+	dTMP kinase	NA	K7R9G5	Vibrio_phage	33.8	1.0e-14
WP_065975029.1|310237_311605_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	62.8	1.6e-78
WP_002809530.1|311878_312412_-	cytochrome b	NA	NA	NA	NA	NA
WP_002809533.1|312408_313506_-	catalase family peroxidase	NA	NA	NA	NA	NA
WP_002809538.1|313940_315311_-	M17 family metallopeptidase	NA	Q6GYZ8	Mycoplasma_phage	30.8	7.6e-25
WP_002809541.1|315355_316093_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_002809543.1|316240_317347_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002809546.1|317522_317906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809550.1|317902_318385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809551.1|318388_318751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809552.1|318866_320303_-	Do family serine endopeptidase	NA	W5SAB9	Pithovirus	30.2	7.2e-10
WP_002809553.1|320548_321367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040762724.1|321492_322155_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_040762756.1|322226_322523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002809560.1|322623_323808_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_002809562.1|323804_324470_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002809565.1|327319_328207_-	TIGR01777 family protein	NA	NA	NA	NA	NA
WP_002809568.1|328402_328996_-	DUF4142 domain-containing protein	NA	NA	NA	NA	NA
WP_002809572.1|329382_329670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134656568.1|330063_330246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002801519.1|330414_331221_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002809589.1|335210_335858_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
WP_002809590.1|335951_337028_+	ferredoxin reductase	NA	NA	NA	NA	NA
WP_002809593.1|337037_338162_+	acyl-CoA desaturase	NA	NA	NA	NA	NA
WP_002809597.1|338367_339930_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_002809598.1|340311_340488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002809599.1|340792_341350_-	lipocalin family protein	NA	A0A167RLA9	Powai_lake_megavirus	35.0	2.6e-16
WP_002809600.1|341721_343242_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_002809601.1|343257_343536_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_002809602.1|343725_344064_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_065975034.1|344660_346640_+	beta-N-acetylglucosaminidase domain-containing protein	NA	NA	NA	NA	NA
WP_002809606.1|347316_347916_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_002809607.1|348236_349115_-	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	31.0	1.3e-14
WP_002809610.1|349351_351238_+	arginine decarboxylase	NA	NA	NA	NA	NA
WP_065975036.1|351612_352581_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.3	1.2e-93
>prophage 3
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	761806	823144	4232635	transposase	Ralstonia_phage(30.0%)	54	NA	NA
WP_065975073.1|761806_762775_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	3.8e-95
WP_002804910.1|763063_763957_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002804911.1|764006_766895_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.9	1.1e-41
WP_162138780.1|767219_768368_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_002804918.1|768481_769018_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	53.6	4.7e-47
WP_082244217.1|769214_769697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804922.1|772105_772630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082244215.1|772634_772958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002812512.1|773274_774537_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_002812509.1|774695_775259_+	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	2.1e-13
WP_002812507.1|775601_776960_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_002812506.1|776959_777556_+	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_040762959.1|777742_779887_-	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_002812500.1|780032_780692_+	serine/threonine protein kinase	NA	NA	NA	NA	NA
WP_002812494.1|780857_781673_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002812489.1|782036_782306_+	DUF3829 domain-containing protein	NA	NA	NA	NA	NA
WP_065975075.1|782357_783326_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.0	1.2e-93
WP_002812488.1|784115_785342_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	24.3	1.4e-17
WP_002812487.1|785493_786783_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_002812486.1|787431_788052_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_040762957.1|788075_788315_+	rubredoxin	NA	NA	NA	NA	NA
WP_002812475.1|788406_789288_-	SirB1 family protein	NA	NA	NA	NA	NA
WP_002812473.1|789460_789910_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_002812471.1|790284_790932_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002812469.1|791021_791492_-	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_082244323.1|791488_792115_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002812465.1|792768_793068_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_002812462.1|793064_793286_-	TIGR02449 family protein	NA	NA	NA	NA	NA
WP_002812454.1|793522_794065_+	YecA family protein	NA	NA	NA	NA	NA
WP_002812450.1|794078_795422_+	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002812447.1|795703_797032_-	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
WP_002812438.1|797751_798909_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
WP_002812435.1|798915_799515_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	C4N218	Cassava_brown_streak_virus	33.2	4.7e-11
WP_002812434.1|799538_800264_-	ribonuclease PH	NA	NA	NA	NA	NA
WP_002812431.1|800375_801236_+	YicC family protein	NA	NA	NA	NA	NA
WP_002812429.1|801388_802000_+	guanylate kinase	NA	A0A218KC48	Bacillus_phage	30.9	1.5e-09
WP_002812428.1|802142_802442_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002812421.1|802569_804741_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.1	8.1e-13
WP_002812417.1|804960_805341_+	RidA family protein	NA	NA	NA	NA	NA
WP_002812416.1|805371_807516_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_087946428.1|807593_808391_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002812415.1|808487_809426_+	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_002812414.1|809497_809740_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_002812413.1|809964_811254_+	citrate synthase	NA	NA	NA	NA	NA
WP_002812412.1|811366_812017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002812411.1|812212_814639_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
WP_002812410.1|814853_815912_+	pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_002812409.1|815911_816667_+	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_002812408.1|816663_817329_+	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_002812407.1|817325_817865_+	pilus assembly protein PilP	NA	NA	NA	NA	NA
WP_002812406.1|817879_819778_+	type IV pilus secretin PilQ family protein	NA	NA	NA	NA	NA
WP_065975077.1|819840_820809_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	3.8e-95
WP_002801519.1|820980_821787_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002802516.1|822337_823144_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	1179260	1217257	4232635	integrase,tRNA,transposase	Pseudomonas_virus(25.0%)	32	1182734:1182749	1208301:1208316
WP_002811438.1|1179260_1180019_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_002811436.1|1180179_1180974_-	thiazole synthase	NA	NA	NA	NA	NA
WP_002811434.1|1181023_1181224_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_002811432.1|1181414_1183199_+	autotransporter domain-containing esterase	NA	NA	NA	NA	NA
1182734:1182749	attL	CAACCTCACCGCTGCG	NA	NA	NA	NA
WP_040762876.1|1183632_1185513_+|integrase	tyrosine-type recombinase/integrase	integrase	Q5QF66	Pseudomonas_virus	51.1	5.2e-101
WP_002811427.1|1185697_1186150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002801519.1|1186136_1186943_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002811424.1|1187008_1188010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039434960.1|1188832_1189126_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_082244306.1|1189153_1189612_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002802516.1|1189639_1190446_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_082244311.1|1190609_1191098_-	DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_088079886.1|1191141_1192286_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	59.2	8.1e-89
WP_040762874.1|1194150_1195173_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	34.1	9.1e-23
WP_002811399.1|1195276_1195567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002811396.1|1195596_1196523_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002811394.1|1196515_1197274_-	type IV toxin-antitoxin system AbiEi family antitoxin	NA	NA	NA	NA	NA
WP_002811392.1|1197499_1197880_+	DUF3742 family protein	NA	NA	NA	NA	NA
WP_088056611.1|1199229_1200028_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002811388.1|1200252_1200699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002811386.1|1200779_1201904_+	DUF4062 domain-containing protein	NA	NA	NA	NA	NA
WP_002811384.1|1201935_1202430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082244310.1|1202692_1203424_+	MobA/MobL family protein	NA	NA	NA	NA	NA
WP_002811379.1|1204090_1204402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002811377.1|1204644_1204986_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002811375.1|1205148_1206852_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_002811373.1|1206892_1207354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040762871.1|1208094_1211037_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
1208301:1208316	attR	CAACCTCACCGCTGCG	NA	NA	NA	NA
WP_002811366.1|1212647_1214858_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	25.0	4.1e-28
WP_002811363.1|1214968_1215697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_134656588.1|1215710_1216277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002802516.1|1216450_1217257_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	1362287	1421123	4232635	coat,transposase,protease	Ralstonia_phage(20.0%)	39	NA	NA
WP_088056934.1|1362287_1363255_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.6e-96
WP_065975123.1|1364488_1365457_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	3.4e-96
WP_002810938.1|1365633_1365930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810937.1|1366145_1367714_-	S8/S53 family peptidase	NA	A0A1V0SLL0	Klosneuvirus	38.5	2.2e-76
WP_002810936.1|1368179_1370537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810935.1|1371101_1373822_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	25.1	1.3e-44
WP_145954047.1|1374203_1374506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083215066.1|1374673_1381054_+	type III effector protein	NA	A0A141E1Y0	Streptococcus_phage	30.0	5.7e-06
WP_002810909.1|1382951_1385849_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	25.7	8.8e-47
WP_002810907.1|1385996_1388483_+	glycoside hydrolase family 127 protein	NA	NA	NA	NA	NA
WP_002810905.1|1388539_1389046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167699501.1|1388932_1389235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145954105.1|1389206_1389632_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975124.1|1391207_1392566_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.4	4.8e-80
WP_002810829.1|1393025_1393682_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002810810.1|1393708_1394155_+	CopD family protein	NA	NA	NA	NA	NA
WP_002810808.1|1394314_1395274_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_002810806.1|1395416_1399001_-	DNA polymerase III subunit alpha	NA	A0A291AVA6	Streptomyces_phage	35.9	8.3e-180
WP_002810803.1|1399225_1399963_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	36.4	7.7e-24
WP_052032156.1|1399959_1401189_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_002810798.1|1401245_1402037_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_002810795.1|1402060_1402522_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_002810792.1|1402518_1403532_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_002810791.1|1403660_1403852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810790.1|1403935_1406302_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_002810789.1|1406385_1407732_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002810788.1|1407758_1408949_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_002810787.1|1408951_1409773_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_040762827.1|1409769_1410531_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	31.9	4.0e-15
WP_002810783.1|1410548_1411106_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002810782.1|1411454_1412177_-	UMP kinase	NA	NA	NA	NA	NA
WP_002810779.1|1413153_1414032_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_040762826.1|1414201_1415020_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_040762825.1|1415323_1416028_-	molecular chaperone	NA	NA	NA	NA	NA
WP_040762824.1|1416030_1416375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002810769.1|1416423_1417458_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002810767.1|1417454_1419803_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002810766.1|1419819_1420590_-	molecular chaperone	NA	NA	NA	NA	NA
WP_002810765.1|1420598_1421123_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
>prophage 7
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	1450108	1501717	4232635	transposase,tRNA,protease	uncultured_Mediterranean_phage(16.67%)	45	NA	NA
WP_002810716.1|1450108_1450717_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002810715.1|1450860_1451061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762817.1|1451256_1451559_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_052032154.1|1451608_1452454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810706.1|1452520_1453021_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_087946488.1|1453121_1455257_-	M3 family metallopeptidase	NA	A0A1V0SID3	Klosneuvirus	25.3	8.2e-42
WP_002810701.1|1455624_1456131_+	glutathione peroxidase	NA	A0A1S7DLQ4	Molluscum_contagiosum_virus	36.2	3.8e-14
WP_002801519.1|1456173_1456980_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002810697.1|1457089_1457869_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_002810693.1|1458064_1459942_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.5	1.2e-23
WP_002810692.1|1460152_1461673_+	fumarate hydratase	NA	NA	NA	NA	NA
WP_002810690.1|1462109_1462796_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_002810687.1|1464513_1464999_-	DUF456 domain-containing protein	NA	NA	NA	NA	NA
WP_002810685.1|1465226_1465442_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	2.9e-16
WP_002810682.1|1465581_1466064_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_002810680.1|1466194_1466623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002810677.1|1466685_1467516_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_002810674.1|1467559_1468327_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_002810671.1|1468326_1468542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002810669.1|1468687_1469476_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_040762815.1|1470481_1471135_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_002810663.1|1471157_1473098_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	30.8	2.3e-27
WP_002810661.1|1473177_1473732_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	36.7	2.8e-18
WP_002810659.1|1473952_1475380_+	replicative DNA helicase	NA	O80281	Escherichia_phage	53.2	4.2e-119
WP_002810656.1|1475481_1476900_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0S949	Catovirus	31.0	1.6e-49
WP_002810654.1|1477099_1477825_+	OmpA family protein	NA	G3M9Z0	Bacillus_virus	33.9	3.7e-10
WP_088056611.1|1477870_1478669_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_145954049.1|1479784_1481911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145954050.1|1481977_1482343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002810648.1|1483036_1483342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810647.1|1483901_1485287_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002810645.1|1485424_1486930_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_002810643.1|1486943_1488125_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002810640.1|1488121_1488919_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_002810638.1|1488918_1490106_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002810636.1|1490107_1490995_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_002810634.1|1491313_1492279_+	cation transporter	NA	NA	NA	NA	NA
WP_002810633.1|1492353_1494435_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002810631.1|1494671_1495292_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_002810630.1|1495288_1496173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810629.1|1496278_1497850_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.8	3.5e-26
WP_145954051.1|1498070_1498538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_134656592.1|1498600_1498939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975129.1|1499044_1500412_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	1.6e-78
WP_065975131.1|1500784_1501717_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	7.6e-93
>prophage 8
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	1633817	1734701	4232635	transposase	Ralstonia_phage(25.0%)	59	NA	NA
WP_065975151.1|1633817_1635173_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	2.8e-80
WP_002810158.1|1635261_1636254_-	response regulator	NA	W8CYM9	Bacillus_phage	29.4	3.4e-06
WP_002810157.1|1636289_1640384_-	response regulator	NA	A0A1V0SGX0	Hokovirus	28.6	1.0e-56
WP_002810149.1|1640533_1641838_-	DUF445 family protein	NA	NA	NA	NA	NA
WP_002810142.1|1642423_1645555_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_002810139.1|1647409_1649089_+	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_002810136.1|1649090_1649936_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_002810133.1|1649932_1652281_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA	NA
WP_002810130.1|1652270_1652549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088079900.1|1653471_1654615_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.1	1.3e-86
WP_002810123.1|1655827_1657144_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_002810119.1|1657143_1658523_-	glutamine synthetase	NA	NA	NA	NA	NA
WP_002810118.1|1658898_1660284_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_002810117.1|1661352_1662468_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002810116.1|1662683_1663886_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_002810115.1|1663882_1665469_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002810113.1|1665473_1666964_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_002810098.1|1667218_1668349_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	5.7e-26
WP_002810095.1|1668345_1669257_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002810093.1|1669253_1670102_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002810090.1|1670515_1671880_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_157276327.1|1672682_1674929_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_002810074.1|1675599_1678770_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_002810071.1|1678782_1680051_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002810070.1|1680065_1680719_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002810068.1|1680994_1686004_+	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_040762768.1|1687555_1690321_-	serine kinase	NA	NA	NA	NA	NA
WP_002810061.1|1692101_1692266_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002810060.1|1692273_1692522_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_145954054.1|1692993_1693200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762801.1|1693261_1694152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088056783.1|1695007_1695806_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_065975159.1|1697047_1698016_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.0e-96
WP_002810034.1|1699804_1700338_-	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
WP_002810028.1|1700490_1702512_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_002810023.1|1703814_1704225_+	TcpQ domain-containing protein	NA	NA	NA	NA	NA
WP_002810020.1|1704350_1705361_+	VirB8 protein	NA	NA	NA	NA	NA
WP_002810015.1|1706121_1707303_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_002810007.1|1707317_1708358_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA	NA
WP_040762794.1|1708416_1709235_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_002810001.1|1709293_1709701_+	TrbC/VirB2 family protein	NA	NA	NA	NA	NA
WP_002809996.1|1709693_1710005_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA	NA
WP_002809993.1|1710105_1712559_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_040762566.1|1712602_1713376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975163.1|1713471_1714578_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_002806879.1|1714597_1715095_+	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_002801519.1|1715677_1716484_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_145954055.1|1717392_1717989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975165.1|1718550_1719351_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_040762566.1|1720461_1721235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975166.1|1721330_1722419_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_002806804.1|1722450_1722945_+	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_002806808.1|1723142_1723769_+	FG-GAP repeat protein	NA	NA	NA	NA	NA
WP_108773702.1|1723878_1725183_+	peptidoglycan-binding protein	NA	B4UTR7	Rhizobium_phage	46.5	1.3e-18
WP_065975168.1|1727691_1727910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082244237.1|1731039_1731549_+	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_082244238.1|1731631_1732216_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_052032121.1|1732968_1733607_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_065975175.1|1733732_1734701_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.6e-96
>prophage 9
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	1937389	2012176	4232635	transposase,integrase	Acidithiobacillus_phage(28.57%)	60	1975001:1975019	2020055:2020073
WP_088056822.1|1937389_1938757_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	62.8	3.5e-78
WP_002809366.1|1939124_1940327_-	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_040762659.1|1942234_1943248_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_002808071.1|1943247_1943679_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_002808067.1|1943678_1944281_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_002808064.1|1944273_1946211_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_002808063.1|1946424_1946874_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_002808062.1|1946870_1947041_-	heme exporter protein CcmD	NA	NA	NA	NA	NA
WP_002808061.1|1947037_1947790_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_002808060.1|1947884_1948580_-	heme exporter protein CcmB	NA	NA	NA	NA	NA
WP_002808059.1|1948576_1949221_-	heme ABC exporter ATP-binding protein CcmA	NA	G3M9Y6	Bacillus_virus	26.3	2.8e-14
WP_002808058.1|1949440_1950589_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002808057.1|1950745_1951546_+	amidohydrolase	NA	NA	NA	NA	NA
WP_002808056.1|1951629_1952433_-	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA	NA
WP_002808054.1|1952603_1953041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002808053.1|1953243_1954875_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_108772762.1|1954867_1956091_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	33.1	2.7e-21
WP_002808051.1|1956068_1956974_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_002808050.1|1957326_1957626_+	YciI family protein	NA	NA	NA	NA	NA
WP_002808049.1|1957622_1957892_+	BolA family transcriptional regulator	NA	NA	NA	NA	NA
WP_002808048.1|1958264_1959287_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_002808047.1|1959405_1962384_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_002808046.1|1962490_1964110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040762612.1|1964113_1965460_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002808044.1|1965459_1966341_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002808043.1|1966337_1967174_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002808041.1|1967200_1970338_+	discoidin domain-containing protein	NA	NA	NA	NA	NA
WP_065975472.1|1971535_1972903_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	3.7e-80
WP_002805789.1|1973423_1974656_-	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_002805788.1|1974648_1975047_-	hypothetical protein	NA	NA	NA	NA	NA
1975001:1975019	attL	ATCGCCGGGATGTCCGCGT	NA	NA	NA	NA
WP_002805787.1|1975051_1975936_-	carbon-nitrogen hydrolase	NA	M1IKC7	Paramecium_bursaria_Chlorella_virus	37.2	5.4e-48
WP_002805785.1|1976013_1977048_-	agmatine deiminase family protein	NA	M1I7C5	Paramecium_bursaria_Chlorella_virus	30.6	9.1e-39
WP_002805783.1|1977273_1977576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002805782.1|1977821_1977947_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_002805781.1|1978124_1978808_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_002805780.1|1978992_1980678_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_002805779.1|1980766_1981078_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	38.9	1.3e-09
WP_002805777.1|1981146_1981452_+	LapA family protein	NA	NA	NA	NA	NA
WP_002805775.1|1981458_1982637_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_002805773.1|1982636_1983605_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_002805772.1|1983618_1985526_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	28.3	1.2e-23
WP_002805770.1|1985525_1986419_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	49.3	5.8e-66
WP_108772763.1|1986572_1986860_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_002805766.1|1991593_1991914_-	DUF1244 domain-containing protein	NA	NA	NA	NA	NA
WP_002805762.1|1991963_1992848_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.3	3.5e-31
WP_002805758.1|1992951_1994409_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.1	5.5e-82
WP_002805756.1|1994534_1996100_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_002805754.1|1996407_1997619_+|integrase	site-specific integrase	integrase	T1S9J3	Salmonella_phage	53.4	2.3e-118
WP_002805752.1|1997702_1997960_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_065975473.1|1998151_1999519_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	9.8e-81
WP_002805744.1|1999592_2000597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002805742.1|2000678_2000912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002805739.1|2000915_2001794_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002805737.1|2001783_2002653_+	iron-binding protein	NA	NA	NA	NA	NA
WP_002805735.1|2003314_2003596_+	TraK family protein	NA	NA	NA	NA	NA
WP_002805732.1|2004007_2004262_+	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_002805728.1|2004258_2004678_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_065975195.1|2005894_2007262_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	64.0	5.7e-81
WP_145954058.1|2010214_2011063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088056830.1|2011404_2012176_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
2020055:2020073	attR	ACGCGGACATCCCGGCGAT	NA	NA	NA	NA
>prophage 10
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	2108871	2159042	4232635	coat,transposase,plate	Xanthomonas_phage(47.06%)	43	NA	NA
WP_065975207.1|2108871_2109096_+	hypothetical protein	NA	A0A1W6DXK4	Xanthomonas_phage	85.5	6.3e-22
WP_065975209.1|2109092_2109275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975210.1|2109267_2110377_+	replication initiation factor domain-containing protein	NA	S0F3I3	Stenotrophomonas_phage	70.6	6.1e-150
WP_065975212.1|2110373_2110667_+	single-stranded DNA-binding protein	NA	B1NI78	Stenotrophomonas_phage	64.9	1.5e-26
WP_065975215.1|2110982_2111234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975216.1|2111347_2112877_+|coat	A coat protein	coat	A0A077JDC5	Xanthomonas_phage	47.5	2.0e-90
WP_065975218.1|2112876_2113194_+	DUF2523 domain-containing protein	NA	A0A077JCZ2	Xanthomonas_phage	55.3	2.6e-21
WP_065975220.1|2113190_2114363_+	zonular occludens toxin	NA	A0A077JGB2	Xanthomonas_phage	60.3	2.7e-127
WP_145954059.1|2114576_2114849_+	hypothetical protein	NA	A0A1W6DXU7	Xanthomonas_phage	39.8	2.6e-09
WP_108773714.1|2115001_2115853_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	65.6	2.1e-94
WP_065975223.1|2116093_2117155_+	replication initiation factor domain-containing protein	NA	S0F3F7	Stenotrophomonas_phage	40.1	4.6e-62
WP_065975225.1|2117279_2117570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975227.1|2117579_2117780_+	hypothetical protein	NA	B1NI79	Stenotrophomonas_phage	67.2	7.6e-19
WP_065975229.1|2117815_2118028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_134656604.1|2118191_2119379_+	hypothetical protein	NA	B1NI80	Stenotrophomonas_phage	40.2	3.2e-27
WP_065975232.1|2119379_2119670_+	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_065975234.1|2119669_2120848_+	zonular occludens toxin	NA	B1NI81	Stenotrophomonas_phage	61.5	9.8e-138
WP_083215074.1|2121047_2121359_-	chloride channel protein	NA	A0A1W6DXV7	Xanthomonas_phage	72.8	3.0e-38
WP_065975235.1|2121651_2121840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975239.1|2121978_2122287_-	hypothetical protein	NA	A0A077JDD0	Xanthomonas_phage	67.7	5.8e-34
WP_002806575.1|2122403_2124182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002806577.1|2124195_2124795_-	NfuA family Fe-S biogenesis protein	NA	NA	NA	NA	NA
WP_002806579.1|2124883_2125240_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_002806581.1|2125236_2125659_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_087946428.1|2127808_2128607_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002806231.1|2130816_2131803_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_040762549.1|2132214_2135874_+	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_002806229.1|2136589_2137237_-	response regulator	NA	NA	NA	NA	NA
WP_002806228.1|2137448_2138210_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_002806227.1|2138398_2138764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002806223.1|2138824_2139256_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_002806218.1|2140521_2141814_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
WP_065975244.1|2142167_2143136_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	1.1e-97
WP_068509606.1|2143402_2143891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159087622.1|2147713_2148148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083215104.1|2148189_2148636_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_065975251.1|2148797_2149622_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_065975253.1|2149618_2152360_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	26.5	1.6e-37
WP_002812636.1|2152452_2152806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975254.1|2152836_2155575_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	29.6	2.7e-90
WP_002812660.1|2155660_2156752_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002812662.1|2156715_2158551_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002812665.1|2158553_2159042_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 11
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	2163497	2245561	4232635	transposase,plate,tRNA,protease	Ralstonia_phage(11.11%)	54	NA	NA
WP_002812677.1|2163497_2164832_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_002812679.1|2164831_2165620_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_088079901.1|2165726_2168444_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_083215078.1|2168503_2169988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975258.1|2169984_2171064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108772812.1|2171204_2171498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975259.1|2171494_2172574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088079902.1|2172945_2175663_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_002812855.1|2175722_2177201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040762969.1|2177197_2178277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108772812.1|2178417_2178711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975260.1|2178707_2179787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083215080.1|2179796_2180282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975261.1|2180278_2181358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145954062.1|2181512_2182469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156775353.1|2184118_2184466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975264.1|2184790_2185597_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002812907.1|2202028_2202286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_068509611.1|2202496_2202724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002812909.1|2202936_2203446_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_002812911.1|2203580_2203799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975265.1|2204473_2205442_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.2e-95
WP_002812918.1|2205784_2206783_+	siroheme synthase	NA	NA	NA	NA	NA
WP_002812919.1|2206810_2207173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002812920.1|2207156_2207726_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
WP_002812923.1|2207763_2209017_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_040762974.1|2209281_2210052_+	OBAP family protein	NA	NA	NA	NA	NA
WP_002812934.1|2210090_2212769_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_002812936.1|2213022_2214165_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_002812938.1|2214336_2215557_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_002812940.1|2215727_2217125_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_002812943.1|2217135_2218353_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_002812946.1|2218352_2218991_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_002812948.1|2219061_2219925_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002812950.1|2219921_2220710_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
WP_002812953.1|2220720_2221926_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_002812972.1|2221944_2222370_-	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.7	1.1e-19
WP_002812974.1|2222589_2223222_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002812976.1|2223247_2225620_+	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_002812978.1|2225849_2227055_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_002812981.1|2227359_2228592_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	35.2	1.4e-41
WP_065975267.1|2228874_2230233_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	64.0	4.3e-81
WP_002813396.1|2230308_2231685_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.0	1.2e-73
WP_040762976.1|2231761_2232433_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_002813400.1|2232497_2234423_-	DUF3857 and transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_002813403.1|2234624_2236979_-	DNA translocase FtsK	NA	G1D482	Mycobacterium_virus	46.3	6.6e-85
WP_002813407.1|2237263_2238232_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	45.1	4.1e-65
WP_002813410.1|2238289_2239408_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_002813413.1|2239654_2240404_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_002813418.1|2240483_2240702_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002813421.1|2240972_2243255_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	44.3	1.3e-173
WP_002813423.1|2243398_2243719_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.3e-12
WP_002813428.1|2243969_2244428_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002813429.1|2244424_2245561_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 12
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	2313057	2360676	4232635	transposase	Haemophilus_phage(25.0%)	18	NA	NA
WP_083215081.1|2313057_2313864_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_145954064.1|2313814_2314000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002802516.1|2314159_2314966_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_052032166.1|2315030_2315510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052032167.1|2315552_2315930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083215083.1|2319631_2328943_+	hypothetical protein	NA	Q7Y5U5	Haemophilus_phage	24.3	1.3e-06
WP_088056870.1|2329909_2330684_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	35.9	4.8e-08
WP_002813560.1|2332680_2335401_+	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_002813562.1|2335575_2335770_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_145953988.1|2337839_2338316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762982.1|2339812_2340559_-	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA	NA
WP_002813576.1|2340660_2341968_-	threonine synthase	NA	NA	NA	NA	NA
WP_082244335.1|2342827_2344051_-	tannase/feruloyl esterase family alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_065975273.1|2344040_2345399_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.4	4.8e-80
WP_002813582.1|2345555_2346515_-	homoserine kinase	NA	NA	NA	NA	NA
WP_002813584.1|2346511_2349019_-	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA	NA
WP_065975277.1|2351598_2352582_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	58.7	4.7e-93
WP_002802516.1|2359869_2360676_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	2437765	2531380	4232635	transposase,tRNA,protease	Ralstonia_phage(16.67%)	55	NA	NA
WP_002813815.1|2437765_2440414_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.2	4.8e-84
WP_002813816.1|2440522_2441011_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_002813818.1|2441301_2442333_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.6	2.5e-113
WP_002813825.1|2442505_2443147_-	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	4.8e-14
WP_002813827.1|2443241_2444918_-	2-polyprenylphenol 6-hydroxylase	NA	G8DDN0	Micromonas_pusilla_virus	27.4	5.4e-41
WP_040762999.1|2448270_2449593_+	DUF4990 domain-containing protein	NA	NA	NA	NA	NA
WP_040763000.1|2450042_2451056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108772775.1|2451043_2451481_-	cointegrate resolution protein T	NA	NA	NA	NA	NA
WP_167699506.1|2453691_2454805_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	35.5	5.4e-37
WP_040761827.1|2455324_2456641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040761833.1|2457167_2458223_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_088056893.1|2463786_2464754_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.6e-96
WP_040761836.1|2465641_2466136_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	51.0	1.3e-27
WP_002801493.1|2466503_2467823_-	GTPase HflX	NA	NA	NA	NA	NA
WP_002801494.1|2467834_2468113_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_002801495.1|2468191_2469175_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002801496.1|2469174_2470077_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	31.7	2.2e-20
WP_002801501.1|2470495_2472436_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	43.6	4.1e-117
WP_002801503.1|2472495_2473128_-	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA	NA
WP_002801505.1|2473194_2473500_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_002801507.1|2473516_2473891_+	Mth938-like domain-containing protein	NA	NA	NA	NA	NA
WP_065975294.1|2474408_2475215_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002801620.1|2477548_2477830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083215086.1|2478655_2479063_-|transposase	transposase	transposase	K4I1H9	Acidithiobacillus_phage	65.9	1.5e-40
WP_159087628.1|2482802_2483246_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_002801729.1|2484150_2484402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002801732.1|2484931_2485888_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_082244165.1|2486373_2488113_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_065975301.1|2488199_2488679_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_108772778.1|2488702_2489167_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_002801745.1|2489163_2490057_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_083215106.1|2490056_2492741_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.0	2.2e-52
WP_040761876.1|2492940_2493897_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	26.9	3.2e-14
WP_040761879.1|2494044_2497110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975483.1|2497096_2500009_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.8	8.8e-55
WP_002801806.1|2501088_2502168_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_040761886.1|2502220_2503015_-	OmpA family protein	NA	NA	NA	NA	NA
WP_002801810.1|2503011_2503995_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_002801812.1|2503991_2507729_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_002801814.1|2507744_2509226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029996253.1|2509285_2509546_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_002801819.1|2509656_2510535_-	M15 family metallopeptidase	NA	A8ATW4	Listeria_phage	34.5	3.0e-06
WP_002801821.1|2510731_2511454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_134656612.1|2512408_2512939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145954066.1|2513022_2517249_-	RHS domain-containing protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	48.1	2.3e-24
WP_145954067.1|2517304_2517676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002806259.1|2518706_2518901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159087903.1|2518897_2519143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762551.1|2519293_2519767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108772781.1|2519763_2520045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108772782.1|2520116_2520518_-	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_083215087.1|2520595_2525188_-	type IV secretion protein Rhs	NA	O64023	Bacillus_phage	54.5	2.8e-31
WP_002801885.1|2525331_2526957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002801887.1|2526979_2529223_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	29.9	1.0e-50
WP_065975175.1|2530411_2531380_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.6e-96
>prophage 14
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	2678115	2740028	4232635	transposase,tRNA,protease	Orpheovirus(11.11%)	54	NA	NA
WP_002814441.1|2678115_2680194_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002814443.1|2680294_2680885_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_002814445.1|2680896_2681316_+	Rnf electron transport complex subunit RnfB	NA	NA	NA	NA	NA
WP_002814446.1|2681534_2682323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814447.1|2682408_2682777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814448.1|2682835_2683399_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_040763055.1|2683395_2684238_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_040763056.1|2684464_2685463_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_002814451.1|2685459_2686710_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002814452.1|2686709_2687600_+	DUF1365 domain-containing protein	NA	NA	NA	NA	NA
WP_002814454.1|2687596_2688892_+	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	32.1	1.1e-38
WP_002814455.1|2688888_2689434_+	DUF2878 domain-containing protein	NA	NA	NA	NA	NA
WP_002814456.1|2689430_2690213_+	DUF1295 domain-containing protein	NA	NA	NA	NA	NA
WP_002814457.1|2690230_2691301_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002814458.1|2691539_2691887_-	RidA family protein	NA	NA	NA	NA	NA
WP_002814464.1|2692441_2695006_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
WP_040763057.1|2695368_2696742_-	virulence factor family protein	NA	NA	NA	NA	NA
WP_002814467.1|2696817_2697000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088079906.1|2697637_2699005_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	62.8	4.1e-79
WP_002814476.1|2699120_2699570_-	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_002814478.1|2699844_2700300_-	PA2169 family four-helix-bundle protein	NA	NA	NA	NA	NA
WP_167699502.1|2700523_2700778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814481.1|2700889_2702098_-	MFS transporter	NA	NA	NA	NA	NA
WP_002814483.1|2702342_2703437_+	alkene reductase	NA	NA	NA	NA	NA
WP_002814486.1|2703623_2703965_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002801519.1|2704024_2704831_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002814490.1|2704939_2705989_+	cation transporter	NA	NA	NA	NA	NA
WP_002814493.1|2706156_2707533_+	Hsp70 family protein	NA	NA	NA	NA	NA
WP_002814496.1|2707716_2707902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156775361.1|2708045_2708267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814501.1|2708393_2708897_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_065975264.1|2709147_2709954_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002814504.1|2710322_2711687_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_108772784.1|2712039_2713413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814507.1|2714228_2714891_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_002814509.1|2714887_2715331_+	HIT family protein	NA	NA	NA	NA	NA
WP_002814511.1|2715358_2715526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814516.1|2715795_2716365_-	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	69.5	9.0e-73
WP_002814519.1|2716460_2717312_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_002814521.1|2718122_2721197_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_002814524.1|2721312_2722908_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_040763058.1|2723243_2725346_+	peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	29.4	5.0e-68
WP_002814529.1|2725533_2727552_+	M13 family metallopeptidase	NA	NA	NA	NA	NA
WP_002814531.1|2727765_2728464_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002814532.1|2728504_2728669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814534.1|2728720_2730091_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.2	3.8e-40
WP_002814536.1|2730087_2731338_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002814538.1|2731345_2732587_-	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_002814541.1|2732823_2733303_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_040763059.1|2733376_2733961_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	40.2	7.0e-20
WP_002814544.1|2734070_2734820_+	C40 family peptidase	NA	A0A0K2SUC1	Clostridium_phage	37.7	4.4e-19
WP_002814546.1|2735101_2735593_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_088057106.1|2735801_2736945_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.8	3.1e-88
WP_002807946.1|2739059_2740028_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.6e-96
>prophage 15
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3022151	3044446	4232635	transposase,protease	Ralstonia_phage(12.5%)	19	NA	NA
WP_065975349.1|3022151_3023120_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.6e-96
WP_040763042.1|3023459_3024491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088079907.1|3024921_3026066_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.8	1.8e-88
WP_040763043.1|3026425_3027289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814264.1|3027313_3028633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814266.1|3028891_3031567_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.7	1.4e-78
WP_002814269.1|3031918_3033211_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	37.7	6.4e-74
WP_002814271.1|3033546_3033732_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_002814272.1|3033986_3034850_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_002814274.1|3034849_3035992_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_156775365.1|3036191_3036332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814275.1|3036717_3037104_-	twitching motility response regulator PilH	NA	W8CYM9	Bacillus_phage	31.8	2.8e-09
WP_002814277.1|3037366_3038263_-	DnaJ domain-containing protein	NA	Q8QNB4	Ectocarpus_siliculosus_virus	46.2	4.1e-11
WP_002814279.1|3038685_3039162_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_002814281.1|3039321_3039804_+	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	38.9	1.2e-25
WP_002814284.1|3039846_3040407_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_040763050.1|3040695_3041223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975264.1|3042522_3043329_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_088079892.1|3043672_3044446_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	35.9	6.2e-08
>prophage 16
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3130697	3186962	4232635	transposase,tRNA,protease	Acinetobacter_phage(21.43%)	41	NA	NA
WP_002801519.1|3130697_3131504_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_065975359.1|3131612_3132581_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.6e-96
WP_002805999.1|3135242_3136535_+	trigger factor	NA	NA	NA	NA	NA
WP_002806026.1|3136630_3137257_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
WP_002806031.1|3137382_3138669_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.6	1.2e-136
WP_002806032.1|3138810_3141288_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	51.6	7.9e-222
WP_002806049.1|3141502_3141775_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	64.0	2.2e-21
WP_002806051.1|3142299_3144270_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_002808035.1|3146607_3146832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002808034.1|3147030_3147714_-	7-carboxy-7-deazaguanine synthase QueE	NA	J9PV61	Bacillus_phage	41.4	7.9e-39
WP_002808033.1|3147744_3148554_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_002808032.1|3148560_3149079_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_002808031.1|3149135_3150455_-	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA	NA
WP_002808030.1|3150726_3151767_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_002808029.1|3151756_3152206_-	protein TolR	NA	NA	NA	NA	NA
WP_002808028.1|3152270_3153050_-	protein TolQ	NA	NA	NA	NA	NA
WP_040762610.1|3153061_3153493_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_002808026.1|3153482_3154520_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	9.2e-07
WP_040762609.1|3154663_3156565_-	potassium transporter Kup	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	31.1	5.9e-68
WP_002808024.1|3156762_3157347_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_002808023.1|3157465_3157990_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_002808022.1|3158100_3158829_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_040762656.1|3158904_3159504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002808020.1|3159681_3160203_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002808019.1|3160652_3162419_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002808018.1|3162576_3163353_+	DUF3011 domain-containing protein	NA	NA	NA	NA	NA
WP_002808016.1|3163929_3165207_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_002808015.1|3165386_3167321_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.0	4.8e-65
WP_002808014.1|3167498_3169886_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.2	1.1e-13
WP_087946428.1|3170073_3170872_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002808013.1|3171016_3171178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002808011.1|3171665_3174053_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	32.9	2.7e-09
WP_002808009.1|3174376_3176776_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	34.5	5.4e-10
WP_002808008.1|3177435_3179133_+	Kef family K(+) transporter	NA	NA	NA	NA	NA
WP_002808006.1|3179243_3179822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088079908.1|3179863_3181231_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	1.8e-79
WP_040762606.1|3181587_3182817_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_002808001.1|3183114_3183312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002807997.1|3183403_3184792_-	amino acid permease	NA	NA	NA	NA	NA
WP_108805796.1|3184960_3185524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975363.1|3185594_3186962_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.2	1.4e-79
>prophage 17
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3264633	3337078	4232635	transposase	Acidithiobacillus_phage(30.0%)	49	NA	NA
WP_088056673.1|3264633_3265431_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_040762594.1|3265559_3266357_+	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
WP_002807819.1|3266394_3267069_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_002807818.1|3267071_3267443_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_002807811.1|3267541_3268723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002807809.1|3269091_3269733_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002807807.1|3269732_3270929_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002807805.1|3271185_3271785_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002807803.1|3271788_3272529_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_002807802.1|3272566_3273376_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_002807801.1|3273378_3273636_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_002807800.1|3273771_3274263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002807799.1|3274447_3275749_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002807797.1|3275741_3276458_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002807796.1|3277920_3278700_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_002807794.1|3278696_3280364_+	phosphoethanolamine transferase	NA	NA	NA	NA	NA
WP_002807792.1|3282554_3282959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082244254.1|3283771_3286696_+	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	51.3	5.0e-260
WP_002807788.1|3287067_3289176_+	catalase	NA	A0A2K9L0T1	Tupanvirus	48.3	2.3e-137
WP_002801519.1|3289393_3290200_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002807787.1|3290206_3290932_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_065975370.1|3293182_3294550_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	2.2e-80
WP_065975372.1|3294526_3294949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002807776.1|3295035_3295797_+	4-hydroxy-2-oxovalerate aldolase	NA	NA	NA	NA	NA
WP_002807774.1|3295797_3297930_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_002807771.1|3298108_3299335_+	siderophore biosynthesis protein PvsA	NA	NA	NA	NA	NA
WP_002807769.1|3299331_3301134_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
WP_002807767.1|3301130_3302327_+	MFS transporter	NA	NA	NA	NA	NA
WP_002807766.1|3302304_3304074_+	iron transporter	NA	NA	NA	NA	NA
WP_002807763.1|3304070_3305258_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_002807761.1|3305282_3307160_-	TonB-dependent vitamin B12 receptor	NA	A0A0P0I887	Acinetobacter_phage	30.7	3.4e-07
WP_040762592.1|3307705_3308536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002807758.1|3309054_3311640_-	ATP-dependent chaperone ClpB	NA	A0A1C3S747	Escherichia_phage	35.6	5.9e-127
WP_040762591.1|3313086_3313824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762590.1|3313853_3316685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002807748.1|3316687_3317611_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_088079909.1|3317619_3320214_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.7	1.8e-38
WP_040762589.1|3320265_3321018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108772791.1|3321028_3321745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082244253.1|3321771_3324756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762587.1|3324767_3325493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975377.1|3325763_3328514_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.2	8.3e-39
WP_088057099.1|3328869_3330014_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.1	1.5e-87
WP_002806651.1|3330264_3330579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002806648.1|3330772_3330997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065975382.1|3331658_3333026_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	64.0	7.5e-81
WP_145954071.1|3333046_3333949_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002806643.1|3334833_3335595_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_065975383.1|3335710_3337078_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	64.0	7.5e-81
>prophage 18
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3407810	3417955	4232635		Enterobacteria_phage(42.86%)	10	NA	NA
WP_002813980.1|3407810_3409157_+	phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.7	4.4e-33
WP_002813986.1|3409205_3410609_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.2	1.2e-49
WP_002813988.1|3410731_3411637_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.3	7.7e-26
WP_002813989.1|3411633_3412191_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	47.8	1.5e-43
WP_002813991.1|3412187_3413075_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.5	3.5e-95
WP_002813993.1|3413131_3414187_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.6	2.8e-83
WP_002813995.1|3414415_3415162_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_002813997.1|3415161_3416106_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_002813999.1|3416316_3417015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814001.1|3417004_3417955_+	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	28.5	1.5e-27
>prophage 19
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3490599	3567891	4232635	transposase,integrase	Hokovirus(16.67%)	51	3513087:3513104	3573096:3573113
WP_088056659.1|3490599_3491397_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002814140.1|3492738_3493449_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_002814142.1|3493445_3494513_-	methyltransferase	NA	NA	NA	NA	NA
WP_002814144.1|3494752_3494971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814146.1|3495192_3496530_-	sorbosone dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002814149.1|3496617_3496926_-	DUF3247 family protein	NA	NA	NA	NA	NA
WP_167699508.1|3497040_3499074_-	PAS domain-containing sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	27.8	3.8e-20
WP_002814152.1|3499191_3499482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814153.1|3499468_3499915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814154.1|3500164_3500740_+	DUF3016 domain-containing protein	NA	NA	NA	NA	NA
WP_002814155.1|3500841_3501927_-	alanine racemase	NA	NA	NA	NA	NA
WP_002814156.1|3501926_3503216_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_002814157.1|3503364_3503850_+	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_040763019.1|3503853_3504285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814161.1|3504573_3505038_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002814163.1|3505308_3506163_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_002814164.1|3506173_3507325_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_002814166.1|3507601_3508186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002814168.1|3508201_3508486_+	DUF4031 domain-containing protein	NA	A0A0K1Y4M8	Klebsiella_phage	43.4	1.9e-07
WP_002814170.1|3508584_3509136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002814172.1|3509298_3509547_+	DUF3297 family protein	NA	NA	NA	NA	NA
WP_002801519.1|3509983_3510790_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_088056659.1|3511059_3511858_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_040763030.1|3512901_3513549_+	hypothetical protein	NA	NA	NA	NA	NA
3513087:3513104	attL	GCCGGTGCTGGATACGTC	NA	NA	NA	NA
WP_108830571.1|3516021_3516336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065975397.1|3516318_3516618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002810932.1|3516700_3517927_-	multifunctional CCA addition/repair protein	NA	K4IEX3	Salmonella_phage	41.8	2.3e-73
WP_002810933.1|3518105_3520079_-	transglycosylase SLT domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	38.0	9.3e-16
WP_088056654.1|3527551_3528919_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	6.3e-80
WP_002802516.1|3537472_3538279_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_002804970.1|3539271_3539718_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_002804971.1|3539815_3540307_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_002804972.1|3540384_3540657_+	four helix bundle protein	NA	NA	NA	NA	NA
WP_002804973.1|3540765_3542133_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_002804974.1|3542345_3543266_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002804975.1|3543277_3543781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002804978.1|3543930_3544308_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_082244220.1|3544731_3545862_+	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_002804983.1|3545978_3546251_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
WP_065975402.1|3546706_3551284_-	Ice nucleation protein	NA	NA	NA	NA	NA
WP_145954072.1|3551636_3551846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804986.1|3552383_3553967_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.6	4.8e-63
WP_002804987.1|3554087_3555383_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_040762463.1|3555600_3557817_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_065975409.1|3557934_3558600_-	MFS transporter	NA	NA	NA	NA	NA
WP_002804993.1|3561023_3562946_+	MFS transporter	NA	NA	NA	NA	NA
WP_002804995.1|3563193_3563538_+	CD225/dispanin family protein	NA	NA	NA	NA	NA
WP_002804998.1|3563537_3563948_+	DUF2752 domain-containing protein	NA	NA	NA	NA	NA
WP_002805000.1|3564001_3564892_-	regulatory signaling modulator protein AmpE	NA	NA	NA	NA	NA
WP_002805001.1|3564965_3565856_-	NAD(+) diphosphatase	NA	NA	NA	NA	NA
WP_040762466.1|3566364_3567891_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
3573096:3573113	attR	GACGTATCCAGCACCGGC	NA	NA	NA	NA
>prophage 20
NZ_CP016830	Xanthomonas fragariae isolate Fap21 chromosome, complete genome	4232635	3603735	3685729	4232635	transposase	Vibrio_phage(20.0%)	55	NA	NA
WP_082244183.1|3603735_3604383_+|transposase	transposase	transposase	K4ICS3	Acidithiobacillus_phage	57.5	1.1e-21
WP_002802660.1|3604678_3605251_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_002802658.1|3605497_3606352_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002802656.1|3606585_3607569_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_002802654.1|3607680_3608709_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002802653.1|3608784_3609588_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SKP9	Klosneuvirus	29.0	1.5e-28
WP_082244180.1|3609887_3610361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002802649.1|3610985_3611414_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_002802646.1|3611584_3612679_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_002802643.1|3612758_3613421_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_087946399.1|3614253_3614934_+	type III secretion protein	NA	NA	NA	NA	NA
WP_002802628.1|3615927_3616314_+	MerC domain-containing protein	NA	NA	NA	NA	NA
WP_002802626.1|3616425_3618144_-	ExeM/NucH family extracellular endonuclease	NA	NA	NA	NA	NA
WP_002802624.1|3618427_3618946_-	cytochrome c5 family protein	NA	NA	NA	NA	NA
WP_002802619.1|3620384_3621005_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002802617.1|3621133_3622297_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_002802615.1|3622307_3623918_+	acyl-CoA carboxyltransferase subunit beta	NA	A0A1B2ITV7	Pike_perch_iridovirus	51.5	1.1e-19
WP_002802613.1|3624161_3626186_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_002802611.1|3626366_3627356_+	type I-F CRISPR-associated endonuclease Cas1	NA	A0A2D0YUF3	Vibrio_phage	34.6	2.5e-46
WP_002802609.1|3627352_3630718_+	type I-F CRISPR-associated helicase Cas3	NA	A0A2I7RCU8	Vibrio_phage	31.3	1.0e-62
WP_002802608.1|3630796_3632152_+	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA	NA
WP_002802606.1|3632148_3633159_+	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA	NA
WP_002802604.1|3633181_3634219_+	type I-F CRISPR-associated protein Csy3	NA	A0A2D0YRR8	Vibrio_phage	37.6	6.5e-45
WP_002802602.1|3634223_3634790_+	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA	NA
WP_002802595.1|3638621_3641747_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.5	1.4e-77
WP_002802593.1|3641743_3642811_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002802592.1|3643073_3645050_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	30.9	3.0e-30
WP_002802591.1|3645049_3645955_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_002802590.1|3646136_3647984_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA	NA
WP_002802589.1|3648107_3649814_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA	NA
WP_002802582.1|3649810_3650539_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
WP_002802578.1|3650539_3651991_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_040762045.1|3651990_3653994_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_002802575.1|3654188_3654626_-	DUF2946 family protein	NA	NA	NA	NA	NA
WP_002802573.1|3654953_3656150_+	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	24.9	1.3e-07
WP_002802571.1|3656470_3656752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002802569.1|3656910_3657894_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002802567.1|3658055_3659261_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_002802556.1|3659277_3660237_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	50.0	6.8e-81
WP_002802552.1|3661419_3662424_-	fructose-bisphosphate aldolase class I	NA	A0A0K0KVJ8	Prochlorococcus_phage	47.9	5.1e-79
WP_002802550.1|3662958_3664425_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_002802548.1|3664623_3665271_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_002802546.1|3665267_3666443_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_002802540.1|3668460_3670320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002802538.1|3670322_3672668_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_157276268.1|3672749_3673898_-	aminotransferase class V-fold PLP-dependent enzyme	NA	H7BUW1	unidentified_phage	35.4	1.7e-25
WP_002802532.1|3673932_3674769_-	phosphoadenosine phosphosulfate reductase family protein	NA	A0A0F7L647	uncultured_marine_virus	34.7	6.1e-25
WP_002802530.1|3674761_3678076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040762016.1|3678077_3679013_-	DUF4007 family protein	NA	NA	NA	NA	NA
WP_002802525.1|3679593_3679863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002802516.1|3680127_3680934_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_159088113.1|3682195_3683023_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_088079886.1|3683064_3684208_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	59.2	8.1e-89
WP_002802512.1|3684209_3684548_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_065975420.1|3684748_3685729_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.4	1.5e-99
>prophage 1
NZ_CP016832	Xanthomonas fragariae isolate Fap21 plasmid pFap21-2, complete sequence	20831	0	7349	20831		Ralstonia_phage(33.33%)	9	NA	NA
WP_134656646.1|1721_1904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804295.1|2089_2374_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002804296.1|2361_2640_-	CopG family ribbon-helix-helix protein	NA	NA	NA	NA	NA
WP_002804298.1|3461_4109_+	recombinase family protein	NA	A0A1W5LU24	Ralstonia_phage	49.5	6.1e-33
WP_167699514.1|4105_4243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804299.1|4352_4985_+	ParA family protein	NA	A0A0K1Y6H3	Rhodobacter_phage	41.6	1.7e-32
WP_002804300.1|4977_5340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804301.1|5422_5746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002804302.1|5939_7349_+	hypothetical protein	NA	A0A1B1P892	Bacillus_phage	20.9	8.1e-06
>prophage 2
NZ_CP016832	Xanthomonas fragariae isolate Fap21 plasmid pFap21-2, complete sequence	20831	12498	13062	20831		Aeromonas_phage(100.0%)	1	NA	NA
WP_108772810.1|12498_13062_+	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	44.3	8.5e-31
>prophage 3
NZ_CP016832	Xanthomonas fragariae isolate Fap21 plasmid pFap21-2, complete sequence	20831	19781	20357	20831		Salmonella_phage(100.0%)	1	NA	NA
WP_040762337.1|19781_20357_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	54.9	1.1e-44
