The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014912	Lactobacillus paracollinoides strain TMW 1.1979 chromosome, complete genome	3235324	987444	994372	3235324		Staphylococcus_phage(66.67%)	7	NA	NA
WP_082409162.1|987444_988209_-	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.6	1.2e-27
WP_065901819.1|988236_989265_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_065901820.1|989551_990019_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	41.8	2.6e-25
WP_191982297.1|990021_991224_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	46.2	5.0e-97
WP_054708374.1|991237_991840_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	35.8	6.1e-27
WP_065901821.1|991841_992873_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	32.9	5.2e-42
WP_065901823.1|992989_994372_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.8	9.7e-28
>prophage 2
NZ_CP014912	Lactobacillus paracollinoides strain TMW 1.1979 chromosome, complete genome	3235324	1016183	1055829	3235324	capsid,head,transposase,portal,terminase,tail	Streptococcus_phage(13.33%)	40	NA	NA
WP_065900857.1|1016183_1017488_-|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	55.7	2.6e-131
WP_065900954.1|1017662_1019045_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.8	4.3e-28
WP_083220028.1|1019570_1021202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065901835.1|1021678_1023307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054712113.1|1023530_1024001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054712111.1|1024157_1024883_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_065901838.1|1024883_1025831_-	hydroxyacid dehydrogenase	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	33.6	1.1e-30
WP_082409389.1|1025842_1026007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156319379.1|1026003_1026165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054712109.1|1026338_1026746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083215578.1|1026891_1028184_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_065901845.1|1028312_1029215_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	26.5	9.5e-08
WP_054712107.1|1029392_1029848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054711767.1|1030212_1030653_+	OsmC family protein	NA	NA	NA	NA	NA
WP_054711801.1|1030782_1031184_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_156319364.1|1032679_1032937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056987345.1|1032958_1033141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054711773.1|1033222_1033819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054711775.1|1034482_1034803_-	thiamine-binding protein	NA	NA	NA	NA	NA
WP_054711778.1|1034948_1035428_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_083215579.1|1035926_1037186_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	28.7	4.4e-19
WP_065901847.1|1037329_1038136_-	MBL fold metallo-hydrolase	NA	A0A2I7SDH3	Paenibacillus_phage	34.6	5.3e-34
WP_054711782.1|1038617_1039205_+	NADPH-dependent F420 reductase	NA	NA	NA	NA	NA
WP_056987344.1|1039902_1040733_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_065901849.1|1040757_1042056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083220030.1|1042045_1043920_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.5	1.0e-32
WP_065901851.1|1044187_1044907_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.4	2.3e-41
WP_042522391.1|1045835_1046036_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.6	1.6e-21
WP_054711791.1|1046154_1046526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065901853.1|1046699_1046969_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_054711795.1|1047093_1048629_-|capsid	phage major capsid protein	capsid	B8R651	Lactobacillus_phage	25.9	2.0e-45
WP_054711797.1|1048625_1049726_-|portal	phage portal protein	portal	A0A2H4J9Q5	uncultured_Caudovirales_phage	33.6	3.3e-47
WP_042522387.1|1049722_1049920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065901855.1|1049879_1051577_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	41.1	9.8e-123
WP_054711942.1|1051573_1052047_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_054711944.1|1052824_1053235_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	44.8	1.9e-19
WP_191982278.1|1053292_1053568_-|head	phage head closure protein	head	E9LUQ5	Lactobacillus_phage	40.7	8.9e-10
WP_054711946.1|1053643_1053826_-	sporulation protein Cse60	NA	NA	NA	NA	NA
WP_065901857.1|1053897_1054269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065901858.1|1054434_1055829_-	virulence protein	NA	Q4ZD27	Staphylococcus_phage	36.5	3.2e-71
>prophage 3
NZ_CP014912	Lactobacillus paracollinoides strain TMW 1.1979 chromosome, complete genome	3235324	2175634	2183888	3235324		Enterococcus_phage(66.67%)	7	NA	NA
WP_054711476.1|2175634_2176630_+	D-2-hydroxyacid dehydrogenase	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	35.5	2.3e-39
WP_065902744.1|2176685_2177267_-	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	37.3	4.8e-21
WP_054711469.1|2177563_2178520_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	63.4	9.1e-118
WP_056987566.1|2178545_2180717_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.1	1.6e-258
WP_054711467.1|2180852_2181083_-	glutaredoxin-like protein NrdH	NA	V5UQJ1	Enterococcus_phage	49.3	2.3e-11
WP_056987569.1|2181315_2181798_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_065902749.1|2182106_2183888_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	40.1	8.3e-56
>prophage 4
NZ_CP014912	Lactobacillus paracollinoides strain TMW 1.1979 chromosome, complete genome	3235324	2580310	2591813	3235324		Streptococcus_phage(37.5%)	8	NA	NA
WP_065903034.1|2580310_2582200_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.4	7.1e-130
WP_065903035.1|2582385_2583549_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	28.2	3.0e-22
WP_054707664.1|2584097_2585936_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	26.2	3.5e-25
WP_054707660.1|2586090_2586546_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A1X9I727	Streptococcus_phage	60.7	2.1e-43
WP_054707657.1|2586573_2586756_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1X9I5W4	Streptococcus_phage	75.0	3.3e-21
WP_054707655.1|2586882_2587794_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.3	6.0e-18
WP_065903036.1|2587947_2590290_+	FAD-binding protein	NA	A0A2P0ZL82	Lactobacillus_phage	50.3	5.1e-45
WP_056987840.1|2590859_2591813_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	44.7	1.8e-65
>prophage 5
NZ_CP014912	Lactobacillus paracollinoides strain TMW 1.1979 chromosome, complete genome	3235324	3048038	3056583	3235324		Synechococcus_phage(33.33%)	8	NA	NA
WP_056987621.1|3048038_3048629_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	34.3	3.1e-23
WP_156770492.1|3048597_3049641_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.9	1.4e-63
WP_065903506.1|3049630_3051091_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.6	1.5e-50
WP_065903975.1|3051066_3053298_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	2.2e-146
WP_054706778.1|3053302_3053974_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_054706775.1|3053970_3054228_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_082409110.1|3054255_3054951_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	36.3	1.3e-36
WP_065903509.1|3056100_3056583_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.5	6.8e-21
>prophage 1
NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	50174	9287	15041	50174	transposase	Streptococcus_phage(16.67%)	8	NA	NA
WP_065903756.1|9287_10520_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	35.8	1.5e-51
WP_065901646.1|10624_11071_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	57.7	4.2e-41
WP_065904027.1|11132_11921_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	35.8	4.4e-33
WP_065904029.1|11913_12147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065904035.1|12647_12920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065904039.1|12919_13474_-	hypothetical protein	NA	F7V9F0	Lactobacillus_virus	38.5	3.8e-15
WP_191982313.1|14130_14361_-	DUF2726 domain-containing protein	NA	A0A1B0WKK5	Flavobacterium_phage	50.0	3.2e-13
WP_065904047.1|14318_15041_-	hypothetical protein	NA	A0A172JI54	Bacillus_phage	36.1	8.1e-26
>prophage 2
NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	50174	40013	50010	50174	transposase,integrase	Lactobacillus_phage(63.64%)	15	30494:30506	50100:50112
30494:30506	attL	AAGGTGGTCACCA	NA	NA	NA	NA
WP_065904085.1|40013_40601_+|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	33.2	8.3e-21
WP_065904087.1|40613_40979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065904088.1|41973_42495_-	HNH endonuclease	NA	E9LUP7	Lactobacillus_phage	68.2	1.4e-59
WP_065904091.1|42975_43404_-	transcriptional regulator	NA	E9LUP5	Lactobacillus_phage	70.9	1.3e-52
WP_065904095.1|43447_43639_-	hypothetical protein	NA	D6PSV7	Lactobacillus_phage	91.9	3.3e-27
WP_065904097.1|43619_44060_-	hypothetical protein	NA	D6PSV5	Lactobacillus_phage	54.6	1.9e-33
WP_065904100.1|44059_44254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065904102.1|44250_44613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_191982309.1|44605_44821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065901646.1|44882_45329_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	57.7	4.2e-41
WP_065903756.1|45433_46666_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	35.8	1.5e-51
WP_065904124.1|46822_47530_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	70.1	7.5e-93
WP_065904107.1|47529_48390_-	DnaD domain protein	NA	A0A1L2JY26	Aeribacillus_phage	36.2	3.3e-18
WP_065904110.1|48401_49241_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A0P0IZH9	Lactobacillus_phage	47.9	6.4e-67
WP_065904113.1|49176_50010_-	phage recombination protein Bet	NA	A8ATK8	Listeria_phage	50.9	5.2e-53
50100:50112	attR	AAGGTGGTCACCA	NA	NA	NA	NA
