assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001702135.1_ASM170213v1	NZ_CP014907	Lactobacillus lindneri strain TMW 1.481 chromosome, complete genome	1	134553-135514	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,csn2,cas2,cas1,cas9,csa3,DinG,DEDDh	Type II-A,Type II-C,Type II-B	GTTCTTAATCTCATTAGAATGACGTACTTCTAAAAC,GTTCTTAATCTCATTAGAATGACGTACTTCTAAAAC,GTTCTTAATCTCATTAGAATGACGTACTTCTAAAAC	36,36,36	2	2	135118-135148|135449-135478	NZ_CP014907.1_941534-941564|NZ_CP014907.1_940266-940237	NA:NA:NA	14,14,12	14	TypeII-A,TypeII-C,TypeII-B	cas3,csn2,cas2,cas1,cas9,csa3,DinG,DEDDh	NA|66aa|up_3|NZ_CP014907.1_132170_132368_-,NA|122aa|up_0|NZ_CP014907.1_133726_134092_-,NA|284aa|down_4|NZ_CP014907.1_141732_142584_+,NA|139aa|down_5|NZ_CP014907.1_142674_143091_+	NA|289aa|up_9|NZ_CP014907.1_127136_128003_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|207aa|up_8|NZ_CP014907.1_128217_128838_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|224aa|up_7|NZ_CP014907.1_128897_129569_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|355aa|up_6|NZ_CP014907.1_129571_130636_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|168aa|up_5|NZ_CP014907.1_130646_131150_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|253aa|up_4|NZ_CP014907.1_131340_132099_+	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|66aa|up_3|NZ_CP014907.1_132170_132368_-	NA	NA|256aa|up_2|NZ_CP014907.1_132385_133153_-	TIGR01528, Protein_pnuC	NA|166aa|up_1|NZ_CP014907.1_133223_133721_-	pfam04138, GtrA, GtrA-like protein	NA|122aa|up_0|NZ_CP014907.1_133726_134092_-	NA	csn2|222aa|down_0|NZ_CP014907.1_135534_136200_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_CP014907.1_136196_136502_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP014907.1_136479_137385_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1342aa|down_3|NZ_CP014907.1_137585_141611_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|284aa|down_4|NZ_CP014907.1_141732_142584_+	NA	NA|139aa|down_5|NZ_CP014907.1_142674_143091_+	NA	NA|266aa|down_6|NZ_CP014907.1_143140_143938_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|287aa|down_7|NZ_CP014907.1_143930_144791_-	TIGR04521, ECF_ATPase_2, energy-coupling factor transporter ATPase	NA|277aa|down_8|NZ_CP014907.1_144775_145606_-	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase	NA|201aa|down_9|NZ_CP014907.1_145678_146281_-	COG4684, COG4684, Predicted membrane protein [Function unknown]
GCF_001702135.1_ASM170213v1	NZ_CP014911	Lactobacillus lindneri strain TMW 1.481 plasmid pL1481-4	1	5503-5659	1	CRISPRCasFinder	no			Orphan	AATCCCTTGCTACGAGCGGAATTTCGAAAATCGAAAG	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csn2,cas2,cas1,cas9,csa3,DinG,DEDDh	NA|81aa|up_0|NZ_CP014911.1_4211_4454_+,NA|62aa|down_1|NZ_CP014911.1_6922_7108_+,NA|93aa|down_3|NZ_CP014911.1_7774_8053_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|192aa|up_6|NZ_CP014911.1_0_577_-	TIGR00900, multidrug_transporter, H+ Antiporter protein	NA|119aa|up_5|NZ_CP014911.1_680_1037_-	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|93aa|up_4|NZ_CP014911.1_1036_1315_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|196aa|up_3|NZ_CP014911.1_1390_1978_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|235aa|up_2|NZ_CP014911.1_1986_2691_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|270aa|up_1|NZ_CP014911.1_3398_4208_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|81aa|up_0|NZ_CP014911.1_4211_4454_+	NA	NA|94aa|down_0|NZ_CP014911.1_6594_6876_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|62aa|down_1|NZ_CP014911.1_6922_7108_+	NA	NA|227aa|down_2|NZ_CP014911.1_7104_7785_+	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|93aa|down_3|NZ_CP014911.1_7774_8053_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
