assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001693295.1_ASM169329v1	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	1	32118-33523	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	Unclear	CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC,CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC,CTTTCTAACCACTAAATCCCGANCACGGGACTGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	19,19,19	19	Unclear	csa3,cas3,RT,DinG,cas14j,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	NA|69aa|up_8|NZ_CP016489.1_21155_21362_-,cas7|295aa|up_5|NZ_CP016489.1_24786_25671_+,cas5|275aa|up_4|NZ_CP016489.1_25674_26499_+,NA|47aa|down_2|NZ_CP016489.1_34707_34848_-,NA|125aa|down_4|NZ_CP016489.1_36862_37237_+,NA|170aa|down_5|NZ_CP016489.1_37968_38478_-,NA|77aa|down_6|NZ_CP016489.1_38893_39124_-,NA|82aa|down_7|NZ_CP016489.1_39183_39429_-	NA|162aa|up_9|NZ_CP016489.1_20658_21144_+	pfam12773, DZR, Double zinc ribbon	NA|69aa|up_8|NZ_CP016489.1_21155_21362_-	NA	WYL|288aa|up_7|NZ_CP016489.1_21324_22188_-	pfam13280, WYL, WYL domain	cas8b5|823aa|up_6|NZ_CP016489.1_22315_24784_+	TIGR00414, Serine--tRNA_ligase, seryl-tRNA synthetase	cas7|295aa|up_5|NZ_CP016489.1_24786_25671_+	NA	cas5|275aa|up_4|NZ_CP016489.1_25674_26499_+	NA	cas6|279aa|up_3|NZ_CP016489.1_29211_30048_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas4|193aa|up_2|NZ_CP016489.1_30057_30636_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|326aa|up_1|NZ_CP016489.1_30638_31616_+	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas2|98aa|up_0|NZ_CP016489.1_31612_31906_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|114aa|down_0|NZ_CP016489.1_33779_34121_-	COG2361, COG2361, Uncharacterized conserved protein [Function unknown]	NA|107aa|down_1|NZ_CP016489.1_34113_34434_-	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|47aa|down_2|NZ_CP016489.1_34707_34848_-	NA	NA|329aa|down_3|NZ_CP016489.1_35854_36841_+	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|125aa|down_4|NZ_CP016489.1_36862_37237_+	NA	NA|170aa|down_5|NZ_CP016489.1_37968_38478_-	NA	NA|77aa|down_6|NZ_CP016489.1_38893_39124_-	NA	NA|82aa|down_7|NZ_CP016489.1_39183_39429_-	NA	NA|369aa|down_8|NZ_CP016489.1_40516_41623_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|191aa|down_9|NZ_CP016489.1_41684_42257_-	PRK14003, PRK14003, K(+)-transporting ATPase subunit C
GCF_001693295.1_ASM169329v1	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	2	101384-101489	2	CRISPRCasFinder	no		WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	Orphan	AATCCCCCTTGGAAGCAAGGTATCTACGGCA	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,DinG,cas14j,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	NA|247aa|up_8|NZ_CP016489.1_90157_90898_-,NA|92aa|up_7|NZ_CP016489.1_91148_91424_-,NA|254aa|up_6|NZ_CP016489.1_91800_92562_+,NA|609aa|up_4|NZ_CP016489.1_94019_95846_+,NA	NA|451aa|up_9|NZ_CP016489.1_88595_89948_-	PLN02302, PLN02302, ent-kaurenoic acid oxidase	NA|247aa|up_8|NZ_CP016489.1_90157_90898_-	NA	NA|92aa|up_7|NZ_CP016489.1_91148_91424_-	NA	NA|254aa|up_6|NZ_CP016489.1_91800_92562_+	NA	NA|303aa|up_5|NZ_CP016489.1_92565_93474_-	pfam13240, zinc_ribbon_2, zinc-ribbon domain	NA|609aa|up_4|NZ_CP016489.1_94019_95846_+	NA	NA|346aa|up_3|NZ_CP016489.1_96051_97089_+	cd13518, PBP2_Fe3_thiamine_like, Substrate binding domain of iron and thiamine transporters-like, a member of the type 2 periplasmic binding fold superfamily	NA|531aa|up_2|NZ_CP016489.1_97088_98681_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|219aa|up_1|NZ_CP016489.1_98677_99334_+	cd03259, ABC_Carb_Solutes_like, ATP-binding cassette domain of the carbohydrate and solute transporters-like	NA|351aa|up_0|NZ_CP016489.1_99320_100373_+	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	NA|263aa|down_0|NZ_CP016489.1_102633_103422_+	pfam12773, DZR, Double zinc ribbon	NA|150aa|down_1|NZ_CP016489.1_103597_104047_+	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|244aa|down_2|NZ_CP016489.1_104313_105045_+	pfam14329, DUF4386, Domain of unknown function (DUF4386)	NA|338aa|down_3|NZ_CP016489.1_105062_106076_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|287aa|down_4|NZ_CP016489.1_106183_107044_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|207aa|down_5|NZ_CP016489.1_107091_107712_-	COG3597, COG3597, Uncharacterized protein/domain associated with GTPases [Function unknown]	NA|733aa|down_6|NZ_CP016489.1_108126_110325_+	TIGR00930, Solute_carrier_family_12_member_1, K-Cl cotransporter	NA|192aa|down_7|NZ_CP016489.1_110443_111019_+	pfam13548, DUF4126, Domain of unknown function (DUF4126)	NA|209aa|down_8|NZ_CP016489.1_112084_112711_-	pfam14273, DUF4360, Domain of unknown function (DUF4360)	NA|411aa|down_9|NZ_CP016489.1_113552_114785_+	pfam13434, K_oxygenase, L-lysine 6-monooxygenase (NADPH-requiring)
GCF_001693295.1_ASM169329v1	NZ_CP016483	Synechococcus sp. PCC 8807 chromosome, complete genome	1	80578-80697	1	CRISPRCasFinder	no		csa3,cas3,RT,DinG,cas14j	Orphan	GGTCAGAAATCAGCACAACAGCACTCGAAGCCA	33	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,DinG,cas14j,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	NA|92aa|up_8|NZ_CP016483.1_75588_75864_-,NA|80aa|up_7|NZ_CP016483.1_75853_76093_-,NA|302aa|up_6|NZ_CP016483.1_76210_77116_-,NA|145aa|up_4|NZ_CP016483.1_77606_78041_+,NA|92aa|up_3|NZ_CP016483.1_78057_78333_+,NA|55aa|up_2|NZ_CP016483.1_78382_78547_+,NA|123aa|up_0|NZ_CP016483.1_79348_79717_+,NA|266aa|down_0|NZ_CP016483.1_81594_82392_+,NA|118aa|down_1|NZ_CP016483.1_82509_82863_+,NA|120aa|down_2|NZ_CP016483.1_82926_83286_+,NA|106aa|down_3|NZ_CP016483.1_83333_83651_+,NA|93aa|down_4|NZ_CP016483.1_83654_83933_+,NA|268aa|down_5|NZ_CP016483.1_83935_84739_+,NA|73aa|down_7|NZ_CP016483.1_85446_85665_+	NA|447aa|up_9|NZ_CP016483.1_73956_75297_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|92aa|up_8|NZ_CP016483.1_75588_75864_-	NA	NA|80aa|up_7|NZ_CP016483.1_75853_76093_-	NA	NA|302aa|up_6|NZ_CP016483.1_76210_77116_-	NA	NA|83aa|up_5|NZ_CP016483.1_77252_77501_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|145aa|up_4|NZ_CP016483.1_77606_78041_+	NA	NA|92aa|up_3|NZ_CP016483.1_78057_78333_+	NA	NA|55aa|up_2|NZ_CP016483.1_78382_78547_+	NA	NA|197aa|up_1|NZ_CP016483.1_78543_79134_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|123aa|up_0|NZ_CP016483.1_79348_79717_+	NA	NA|266aa|down_0|NZ_CP016483.1_81594_82392_+	NA	NA|118aa|down_1|NZ_CP016483.1_82509_82863_+	NA	NA|120aa|down_2|NZ_CP016483.1_82926_83286_+	NA	NA|106aa|down_3|NZ_CP016483.1_83333_83651_+	NA	NA|93aa|down_4|NZ_CP016483.1_83654_83933_+	NA	NA|268aa|down_5|NZ_CP016483.1_83935_84739_+	NA	NA|263aa|down_6|NZ_CP016483.1_84668_85457_+	cd00737, lyz_endolysin_autolysin, endolysin and autolysin	NA|73aa|down_7|NZ_CP016483.1_85446_85665_+	NA	NA|86aa|down_8|NZ_CP016483.1_85773_86031_-	pfam10985, DUF2805, Protein of unknown function (DUF2805)	NA|279aa|down_9|NZ_CP016483.1_86090_86927_-	PRK09563, rbgA, GTPase YlqF; Reviewed
GCF_001693295.1_ASM169329v1	NZ_CP016483	Synechococcus sp. PCC 8807 chromosome, complete genome	2	1993008-1993116	2	CRISPRCasFinder	no		csa3,cas3,RT,DinG,cas14j	Orphan	GGTTTCAGTCCCGTAATCGGGATTTAGTGGTTGGAAA	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,DinG,cas14j,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	NA|163aa|up_8|NZ_CP016483.1_1987792_1988281_-,NA|259aa|up_7|NZ_CP016483.1_1989382_1990159_+,NA|72aa|up_5|NZ_CP016483.1_1990865_1991081_+,NA|161aa|up_4|NZ_CP016483.1_1991071_1991554_+,NA|72aa|up_3|NZ_CP016483.1_1991550_1991766_+,NA|98aa|up_2|NZ_CP016483.1_1991762_1992056_+,NA|70aa|up_0|NZ_CP016483.1_1992794_1993004_+,NA|137aa|down_0|NZ_CP016483.1_1993158_1993569_-,NA|50aa|down_1|NZ_CP016483.1_1993559_1993709_-,NA|73aa|down_2|NZ_CP016483.1_1993698_1993917_-,NA|73aa|down_4|NZ_CP016483.1_1996129_1996348_-,NA|88aa|down_5|NZ_CP016483.1_1996334_1996598_-,NA|67aa|down_7|NZ_CP016483.1_1997018_1997219_+,NA|129aa|down_8|NZ_CP016483.1_1997236_1997623_+,NA|71aa|down_9|NZ_CP016483.1_1997687_1997900_+	NA|558aa|up_9|NZ_CP016483.1_1985834_1987508_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|163aa|up_8|NZ_CP016483.1_1987792_1988281_-	NA	NA|259aa|up_7|NZ_CP016483.1_1989382_1990159_+	NA	NA|217aa|up_6|NZ_CP016483.1_1990211_1990862_+	pfam16963, PelD_GGDEF, PelD GGDEF domain	NA|72aa|up_5|NZ_CP016483.1_1990865_1991081_+	NA	NA|161aa|up_4|NZ_CP016483.1_1991071_1991554_+	NA	NA|72aa|up_3|NZ_CP016483.1_1991550_1991766_+	NA	NA|98aa|up_2|NZ_CP016483.1_1991762_1992056_+	NA	NA|235aa|up_1|NZ_CP016483.1_1992048_1992753_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|70aa|up_0|NZ_CP016483.1_1992794_1993004_+	NA	NA|137aa|down_0|NZ_CP016483.1_1993158_1993569_-	NA	NA|50aa|down_1|NZ_CP016483.1_1993559_1993709_-	NA	NA|73aa|down_2|NZ_CP016483.1_1993698_1993917_-	NA	NA|709aa|down_3|NZ_CP016483.1_1993919_1996046_-	TIGR00665, DnaB, replicative DNA helicase	NA|73aa|down_4|NZ_CP016483.1_1996129_1996348_-	NA	NA|88aa|down_5|NZ_CP016483.1_1996334_1996598_-	NA	NA|84aa|down_6|NZ_CP016483.1_1996763_1997015_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|67aa|down_7|NZ_CP016483.1_1997018_1997219_+	NA	NA|129aa|down_8|NZ_CP016483.1_1997236_1997623_+	NA	NA|71aa|down_9|NZ_CP016483.1_1997687_1997900_+	NA
GCF_001693295.1_ASM169329v1	NZ_CP016483	Synechococcus sp. PCC 8807 chromosome, complete genome	3	2342354-2342453	3	CRISPRCasFinder	no		csa3,cas3,RT,DinG,cas14j	Orphan	TGGAGCGAATTCTCAAAATCAAGCA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,DinG,cas14j,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2	NA,NA|813aa|down_2|NZ_CP016483.1_2344292_2346731_+,NA|125aa|down_9|NZ_CP016483.1_2353412_2353787_-	NA|81aa|up_9|NZ_CP016483.1_2332463_2332706_+	pfam03840, SecG, Preprotein translocase SecG subunit	NA|275aa|up_8|NZ_CP016483.1_2332722_2333547_+	COG5549, COG5549, Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]	NA|348aa|up_7|NZ_CP016483.1_2333647_2334691_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|367aa|up_6|NZ_CP016483.1_2334912_2336013_-	pfam02771, Acyl-CoA_dh_N, Acyl-CoA dehydrogenase, N-terminal domain	NA|319aa|up_5|NZ_CP016483.1_2336197_2337154_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|258aa|up_4|NZ_CP016483.1_2337422_2338196_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|258aa|up_3|NZ_CP016483.1_2338199_2338973_-	pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase	NA|106aa|up_2|NZ_CP016483.1_2338972_2339290_-	pfam08855, DUF1825, Domain of unknown function (DUF1825)	NA|131aa|up_1|NZ_CP016483.1_2339412_2339805_+	COG2314, XynA, Predicted membrane protein [Function unknown]	NA|368aa|up_0|NZ_CP016483.1_2339814_2340918_-	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|152aa|down_0|NZ_CP016483.1_2342724_2343180_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|373aa|down_1|NZ_CP016483.1_2343130_2344249_+	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion]	NA|813aa|down_2|NZ_CP016483.1_2344292_2346731_+	NA	NA|77aa|down_3|NZ_CP016483.1_2347601_2347832_+	pfam10929, DUF2811, Protein of unknown function (DUF2811)	NA|207aa|down_4|NZ_CP016483.1_2347847_2348468_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|332aa|down_5|NZ_CP016483.1_2348436_2349432_+	COG0392, COG0392, Predicted integral membrane protein [Function unknown]	NA|83aa|down_6|NZ_CP016483.1_2349474_2349723_+	pfam17275, DUF5340, Family of unknown function (DUF5340)	NA|958aa|down_7|NZ_CP016483.1_2349901_2352775_+	COG4581, COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair]	NA|156aa|down_8|NZ_CP016483.1_2352869_2353337_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|125aa|down_9|NZ_CP016483.1_2353412_2353787_-	NA
