The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	374739	430702	2954923	tail,transposase,head,terminase,tRNA	Escherichia_phage(16.67%)	53	NA	NA
WP_037089165.1|374739_375756_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_004441645.1|375752_376901_+	nitrogen regulation protein NR(II)	NA	W8CYF6	Bacillus_phage	24.7	2.4e-08
WP_004441656.1|376897_378349_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_035208859.1|378499_380761_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_004441661.1|380750_382115_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_037089168.1|382164_383541_+	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_004441666.1|383725_384208_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_037089259.1|384391_385723_+	GTPase HflX	NA	NA	NA	NA	NA
WP_037089260.1|385795_386152_-	VOC family protein	NA	NA	NA	NA	NA
WP_035208858.1|386163_386568_-	polyketide cyclase	NA	NA	NA	NA	NA
WP_037089170.1|386689_388273_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_037089172.1|388269_388770_+	FixH family protein	NA	NA	NA	NA	NA
WP_081950386.1|388766_391058_+	cadmium-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	29.6	1.3e-72
WP_037089176.1|391054_391228_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_006697538.1|391355_392786_+	NADP-dependent phosphogluconate dehydrogenase	NA	E3SJC4	Synechococcus_phage	29.6	1.7e-27
WP_004441687.1|392851_393175_-	membrane protein	NA	NA	NA	NA	NA
WP_037089179.1|393354_394386_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_037089183.1|397461_398514_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_037089185.1|398574_399594_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037089187.1|399698_400646_+	metal ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	27.4	4.3e-11
WP_004441703.1|400638_401457_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_004441705.1|401453_401867_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_037089188.1|401906_402440_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_037089190.1|402467_403157_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_037089192.1|403294_404305_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_037089194.1|404311_405112_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_037089196.1|405168_408090_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.1	0.0e+00
WP_004441725.1|408396_408933_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	74.2	1.8e-46
WP_037089197.1|408972_409230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022556124.1|409284_410433_-	HPP family protein	NA	NA	NA	NA	NA
WP_035208833.1|410560_411190_-	MarC family protein	NA	NA	NA	NA	NA
WP_004441736.1|411406_414199_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.4	3.6e-98
WP_004441743.1|414291_414552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077987111.1|414634_416128_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_004441745.1|416267_416987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004441746.1|417118_417382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037089202.1|417397_417625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077987112.1|417954_418119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037089204.1|418414_418609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037089206.1|418605_418839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065653606.1|419844_420207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156779242.1|420218_421520_-	hypothetical protein	NA	A0A1W6JP49	Morganella_phage	64.8	5.7e-14
WP_003501246.1|421784_422519_-	ATPase	NA	A0A2L1IVB6	Escherichia_phage	31.2	1.5e-32
WP_052821263.1|422520_424020_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_003501246.1|424234_424969_-	ATPase	NA	A0A2L1IVB6	Escherichia_phage	31.2	1.5e-32
WP_052821263.1|424970_426470_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_037094234.1|426576_427194_-	hypothetical protein	NA	A0A291AUM6	Sinorhizobium_phage	67.7	1.6e-35
WP_052114331.1|427190_428849_-|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	35.4	7.9e-77
WP_052114330.1|428832_429261_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_037094230.1|429257_429575_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_037094227.1|429571_429985_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_037094224.1|429981_430401_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_037094221.1|430393_430702_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
>prophage 2
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	606498	614691	2954923	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_037093473.1|606498_608031_+	AMP-binding protein	NA	A0A2K9KZV5	Tupanvirus	23.0	2.2e-20
WP_081950726.1|608110_609292_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_037093477.1|609292_610450_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	43.1	5.2e-43
WP_004442089.1|610641_611772_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	53.0	2.1e-105
WP_037093470.1|611771_612854_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_037093468.1|613052_613562_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.1	1.1e-45
WP_004442095.1|613598_614168_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.8	8.5e-47
WP_004442098.1|614196_614691_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.7	1.9e-26
>prophage 3
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	631069	639472	2954923	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
WP_080822811.1|631069_632680_-	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	NA	I3PV24	Clostridium_phage	30.4	1.1e-11
WP_080822813.1|632980_633622_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
WP_004442133.1|633630_634401_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.8	1.8e-23
WP_037093446.1|634574_635858_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	8.2e-98
WP_022556270.1|635959_636763_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	40.7	2.4e-42
WP_037093445.1|636759_637506_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_003509722.1|637562_637769_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
WP_004442146.1|637899_638634_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.1	3.4e-40
WP_034498970.1|638626_639472_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.7	1.5e-34
>prophage 4
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	2256171	2265759	2954923	integrase	Sinorhizobium_phage(44.44%)	19	2254857:2254903	2269225:2269271
2254857:2254903	attL	AGCTTCCCAAGCTGAATACGAGGGTTCGATTCCCTTCACCCGCTCCA	NA	NA	NA	NA
WP_037089334.1|2256171_2257203_-|integrase	tyrosine-type recombinase/integrase	integrase	F8TUV0	EBPR_podovirus	33.6	1.9e-36
WP_037089333.1|2257189_2257417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065653627.1|2257675_2258161_-	hypothetical protein	NA	H2BD37	Pseudomonas_phage	45.9	3.4e-20
WP_052114178.1|2258157_2258604_-	ASCH domain-containing protein	NA	A0A291AUQ6	Sinorhizobium_phage	57.1	1.2e-40
WP_037089332.1|2258600_2259056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037089331.1|2259070_2259514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037089330.1|2259503_2259692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037089329.1|2259750_2260656_-	DUF2303 family protein	NA	A0A291AUR3	Sinorhizobium_phage	62.3	3.1e-107
WP_037089328.1|2260715_2261048_-	hypothetical protein	NA	A0A291AUR5	Sinorhizobium_phage	74.3	3.6e-37
WP_125270256.1|2261078_2261279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596117.1|2261338_2261602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037089325.1|2261659_2261842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155276033.1|2261905_2262052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037089324.1|2262054_2262477_-	tellurite resistance TerB family protein	NA	A0A1Y0T181	Sinorhizobium_phage	48.8	1.5e-24
WP_037089323.1|2262751_2263099_-	helix-turn-helix transcriptional regulator	NA	A0A068C9F0	Rhizobium_phage	67.0	2.3e-39
WP_037089322.1|2263194_2263425_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037089321.1|2263634_2264126_+	hypothetical protein	NA	R9TQJ7	Rhizobium_phage	63.0	9.6e-47
WP_037089320.1|2264122_2264374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081950449.1|2264613_2265759_+	SAM-dependent methyltransferase	NA	A0A068C9F4	Rhizobium_phage	62.5	1.6e-124
2269225:2269271	attR	AGCTTCCCAAGCTGAATACGAGGGTTCGATTCCCTTCACCCGCTCCA	NA	NA	NA	NA
>prophage 5
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	2337237	2379617	2954923	tail,transposase,capsid,head,integrase,terminase,portal	Rhizobium_phage(45.45%)	56	2337023:2337074	2380606:2380657
2337023:2337074	attL	CCCTTGGTAAGGGAGAGGCCGAGAGTTCAAATCTCTCTAGCAGCACCATTTT	NA	NA	NA	NA
WP_037092357.1|2337237_2338404_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037092358.1|2338591_2338855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037092359.1|2338854_2339142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596134.1|2339145_2339547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596135.1|2339550_2340396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037092363.1|2340398_2340611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081950660.1|2340770_2341139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037092364.1|2341233_2341971_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037092367.1|2342602_2343205_-	hypothetical protein	NA	B4UTV8	Rhizobium_phage	44.4	1.5e-41
WP_037092368.1|2343310_2343718_+	hypothetical protein	NA	B4UTW7	Rhizobium_phage	69.3	2.0e-42
WP_037092369.1|2343756_2344116_+	hypothetical protein	NA	B4UTW0	Rhizobium_phage	40.5	1.4e-07
WP_037092370.1|2344112_2344394_+	hypothetical protein	NA	B4UTW1	Rhizobium_phage	60.4	2.6e-28
WP_037092430.1|2344707_2344908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092371.1|2344907_2345135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092373.1|2345224_2345992_+	ATP-binding protein	NA	B4UTW5	Rhizobium_phage	79.0	3.9e-119
WP_037092375.1|2345991_2346630_+	HNH endonuclease	NA	B4UTX2	Rhizobium_phage	41.5	1.8e-37
WP_037092376.1|2346666_2347224_+	DUF669 domain-containing protein	NA	NA	NA	NA	NA
WP_037092378.1|2347286_2348039_+	hypothetical protein	NA	A0A2I7SC26	Paenibacillus_phage	32.4	3.2e-33
WP_037092379.1|2348099_2349152_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	56.3	3.4e-97
WP_037092380.1|2349155_2349353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081950661.1|2349312_2349549_+	hypothetical protein	NA	A0A0F6SJ45	Sinorhizobium_phage	83.8	3.7e-28
WP_037092383.1|2349548_2350478_+	hypothetical protein	NA	B4UTX3	Rhizobium_phage	83.1	2.4e-155
WP_037092384.1|2350500_2351037_+	sigma-70 family RNA polymerase sigma factor	NA	B4UTX4	Rhizobium_phage	33.6	4.2e-11
WP_037092385.1|2351037_2351394_+	hypothetical protein	NA	B4UTY2	Rhizobium_phage	83.6	6.5e-53
WP_037092386.1|2351394_2353149_+	DEAD/DEAH box helicase	NA	B4UTX6	Rhizobium_phage	43.5	9.4e-137
WP_152596136.1|2353237_2353450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092388.1|2353446_2353980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092389.1|2353979_2354189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092390.1|2354185_2354434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092391.1|2354496_2355042_+	MT-A70 family protein	NA	A0A1V0DX34	Synechococcus_virus	50.3	1.3e-44
WP_037092392.1|2355041_2356430_+	DUF4942 domain-containing protein	NA	A0A2I7RNS1	Vibrio_phage	29.2	1.0e-08
WP_037092394.1|2356426_2356801_+	hypothetical protein	NA	B4UTY6	Rhizobium_phage	52.8	5.6e-31
WP_052114240.1|2356800_2358882_+	hypothetical protein	NA	Q6V7R9	Burkholderia_virus	31.7	8.2e-63
WP_152596139.1|2358721_2359201_-	hypothetical protein	NA	A0A2I7R0N5	Vibrio_phage	44.8	6.6e-08
WP_052114242.1|2359556_2361818_+	AAA family ATPase	NA	B4UTY9	Rhizobium_phage	45.0	1.4e-63
WP_081950663.1|2362124_2363039_+	hypothetical protein	NA	A0A1B0VME2	Pseudomonas_phage	53.9	9.8e-45
WP_037092395.1|2363038_2363515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092396.1|2363643_2364132_+	VRR-NUC domain-containing protein	NA	B4UTZ1	Rhizobium_phage	68.4	8.6e-48
WP_037092397.1|2364172_2365126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152596137.1|2365599_2366277_+	hypothetical protein	NA	A0A2K9VGY0	Gordonia_phage	43.6	1.3e-12
WP_037092401.1|2366689_2367073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081950665.1|2366990_2368970_+|terminase	terminase	terminase	A0A0U2C138	Paracoccus_phage	49.3	6.6e-155
WP_037092402.1|2368994_2370224_+|portal	phage portal protein	portal	A0A0U4IIV7	Pseudomonas_phage	38.0	6.5e-68
WP_037092404.1|2370233_2371355_+	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	34.7	5.6e-34
WP_037092405.1|2371363_2372569_+|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	57.3	3.2e-112
WP_152596138.1|2372671_2373382_+	hypothetical protein	NA	B4UTY8	Rhizobium_phage	45.7	3.7e-23
WP_037092407.1|2373416_2373683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092408.1|2373660_2374002_+	hypothetical protein	NA	A0A0H4INV0	Stenotrophomonas_phage	51.3	1.1e-06
WP_037092409.1|2374003_2374351_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J711	uncultured_Caudovirales_phage	38.4	1.8e-07
WP_037092411.1|2374476_2374833_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_037092412.1|2374829_2375324_+	phage protein, HK97 gp10 family	NA	NA	NA	NA	NA
WP_037092413.1|2375323_2375734_+	DUF3168 domain-containing protein	NA	I3UM06	Rhodobacter_phage	39.0	9.3e-11
WP_013636135.1|2375768_2376200_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_113731869.1|2376612_2377750_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	8.8e-19
WP_065653631.1|2377768_2379199_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.3	8.7e-40
WP_037095105.1|2379272_2379617_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	31.6	8.6e-10
2380606:2380657	attR	CCCTTGGTAAGGGAGAGGCCGAGAGTTCAAATCTCTCTAGCAGCACCATTTT	NA	NA	NA	NA
>prophage 6
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	2680286	2714654	2954923	protease,tail,capsid,integrase,head,terminase,portal	Rhizobium_phage(37.5%)	46	2680133:2680181	2721494:2721542
2680133:2680181	attL	CGTTCGGGACGTGGGGGTCGGAGGTTCGAATCCTCTCACTCCGACCAGC	NA	NA	NA	NA
WP_037090930.1|2680286_2681138_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUQ3	Sinorhizobium_phage	71.7	4.3e-119
WP_052114203.1|2681595_2682135_-	hypothetical protein	NA	A0A068C9C1	Rhizobium_phage	37.7	5.8e-21
WP_037090756.1|2682131_2682317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037090755.1|2682309_2682648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052114202.1|2682647_2682881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596127.1|2682877_2683501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052114201.1|2683493_2683877_-	hypothetical protein	NA	A0A240F4V4	Ochrobactrum_phage	60.2	4.3e-34
WP_037090751.1|2683876_2684422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037090750.1|2684421_2684895_-	hypothetical protein	NA	R9TRR2	Rhizobium_phage	39.0	5.3e-18
WP_037090749.1|2684897_2686070_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	30.8	6.3e-36
WP_052114200.1|2686094_2687060_-	DUF5131 family protein	NA	A0A240F4U9	Ochrobactrum_phage	50.4	6.1e-61
WP_037090748.1|2687052_2687343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037090747.1|2687441_2687792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037090744.1|2688160_2688754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152596125.1|2688774_2688975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037090742.1|2689034_2689217_-	hypothetical protein	NA	R9TP82	Rhizobium_phage	42.9	2.6e-05
WP_037090926.1|2689485_2690175_-	hypothetical protein	NA	R9TRS6	Rhizobium_phage	86.5	3.5e-111
WP_037090740.1|2690932_2691409_+	hypothetical protein	NA	A0A291AUS4	Sinorhizobium_phage	44.4	1.4e-21
WP_156779249.1|2691417_2691573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090739.1|2691569_2691806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081950562.1|2691805_2692129_+	DUF2312 domain-containing protein	NA	A0A2L0V115	Agrobacterium_phage	48.5	6.4e-15
WP_081950561.1|2692125_2693643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090737.1|2693639_2695559_+	DNA methyltransferase	NA	A0A291AUL2	Sinorhizobium_phage	79.1	6.0e-286
WP_037090735.1|2695555_2695849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090733.1|2695862_2697107_+	helix-turn-helix domain-containing protein	NA	A0A291AUK7	Sinorhizobium_phage	41.7	1.4e-73
WP_037090731.1|2697093_2697744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090730.1|2697907_2698270_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	50.4	5.1e-29
WP_037090729.1|2698596_2699076_+	resolvase	NA	I3ULZ5	Rhodobacter_phage	54.9	2.4e-26
WP_037090728.1|2699075_2700788_+|terminase	terminase large subunit	terminase	A0A0P0ZEI4	Stx2-converting_phage	44.6	3.3e-126
WP_052114210.1|2700896_2702108_+|portal	phage portal protein	portal	A0A141GEV9	Brucella_phage	55.6	1.7e-121
WP_037090726.1|2702073_2702928_+|protease	Clp protease ClpP	protease	A0A141GEW1	Brucella_phage	73.4	5.5e-114
WP_052114209.1|2703073_2704321_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	60.0	1.1e-136
WP_037090725.1|2704382_2704703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090724.1|2704760_2705369_+	hypothetical protein	NA	A0A141GEW4	Brucella_phage	33.5	4.1e-15
WP_037090723.1|2705365_2705701_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_037090722.1|2705700_2706135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037090721.1|2706145_2706517_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_037090720.1|2706513_2706951_+|tail	tail protein	tail	NA	NA	NA	NA
WP_037090718.1|2706950_2707304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152596124.1|2707597_2708077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052114199.1|2708140_2710447_+	hypothetical protein	NA	A0A0H4ADF4	Pseudoalteromonas_phage	43.8	2.2e-40
WP_037090715.1|2710439_2711153_+	hypothetical protein	NA	B4UTQ7	Rhizobium_phage	55.6	1.3e-65
WP_037090713.1|2711152_2711719_+	hypothetical protein	NA	B4UTQ9	Rhizobium_phage	60.8	4.9e-63
WP_037090712.1|2711773_2712109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596129.1|2712189_2712564_+	hypothetical protein	NA	B4UTR0	Rhizobium_phage	54.0	2.1e-30
WP_037090921.1|2712590_2714654_+	hypothetical protein	NA	B4UTR1	Rhizobium_phage	62.5	6.3e-249
2721494:2721542	attR	CGTTCGGGACGTGGGGGTCGGAGGTTCGAATCCTCTCACTCCGACCAGC	NA	NA	NA	NA
>prophage 7
NZ_CP016320	Rhizobium sp. S41 chromosome 1, complete sequence	2954923	2853080	2861079	2954923	tail,head,protease,portal	Geobacillus_phage(33.33%)	11	NA	NA
WP_037091720.1|2853080_2854247_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	38.7	1.0e-62
WP_003509186.1|2854434_2854755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037091542.1|2854783_2855374_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	44.1	4.1e-28
WP_037091540.1|2856842_2857412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006700095.1|2857415_2857757_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_004440751.1|2857753_2858149_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_080823032.1|2858155_2859265_-	MFS transporter	NA	NA	NA	NA	NA
WP_004440755.1|2859444_2859852_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_004440758.1|2859851_2860211_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_081950612.1|2860207_2860453_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_037091537.1|2860497_2861079_+|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	42.3	1.0e-10
>prophage 1
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	38141	109750	2569444	transposase,integrase	uncultured_virus(12.5%)	55	66185:66201	120243:120259
WP_065653644.1|38141_39734_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	32.9	3.4e-53
WP_035228718.1|40826_41243_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_035228721.1|41366_41876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035228726.1|41926_42415_-	signal peptidase II	NA	NA	NA	NA	NA
WP_107341867.1|42705_43221_-	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_037094252.1|43384_43633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037094253.1|44273_44807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114332.1|45078_46107_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_156779256.1|46110_46281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094255.1|46307_47366_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_037094257.1|47368_48292_-	cation transporter	NA	NA	NA	NA	NA
WP_037094259.1|48315_48978_-	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_052114333.1|48974_49346_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_037094264.1|49636_50254_+	SCO family protein	NA	NA	NA	NA	NA
WP_037094266.1|50285_50987_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_037094268.1|51296_51893_+	DedA family protein	NA	NA	NA	NA	NA
WP_037094270.1|52242_53226_+	arsenic resistance protein	NA	NA	NA	NA	NA
WP_065653655.1|53834_56810_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	36.6	3.0e-183
WP_143150180.1|57006_57174_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_037093310.1|57490_58054_+	acyloxyacyl hydrolase	NA	NA	NA	NA	NA
WP_143150181.1|58453_59056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093314.1|59703_60876_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_156779257.1|60821_61925_+	FUSC family protein	NA	NA	NA	NA	NA
WP_037093315.1|62403_62973_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_037093345.1|63136_64201_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_037093316.1|64197_66966_+	ribosome-associated ATPase/putative transporter RbbA	NA	A0A2H4PQG7	Staphylococcus_phage	27.5	2.5e-19
66185:66201	attL	ATGTCGAGATCGGCGCC	NA	NA	NA	NA
WP_081950721.1|66962_68081_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_037093318.1|68113_69190_+	NAD(P)-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.7	1.3e-11
WP_037093320.1|69440_70910_+	arginine-ornithine antiporter	NA	NA	NA	NA	NA
WP_037093322.1|70947_72180_+	arginine deiminase	NA	NA	NA	NA	NA
WP_037093323.1|72198_73200_+	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_037093325.1|73201_74131_+	carbamate kinase	NA	NA	NA	NA	NA
WP_037093327.1|74821_76018_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_037093346.1|76265_76871_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_037093328.1|76867_78643_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_037093329.1|78650_80060_+	bifunctional enoyl-CoA hydratase/phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_037093331.1|80056_81241_+	acetate/propionate family kinase	NA	NA	NA	NA	NA
WP_052114273.1|81471_82590_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_081950722.1|82969_83824_+	universal stress protein	NA	NA	NA	NA	NA
WP_037093333.1|83912_84443_+	DUF1269 domain-containing protein	NA	NA	NA	NA	NA
WP_037093335.1|84499_86866_+	phosphoketolase family protein	NA	NA	NA	NA	NA
WP_037093349.1|89272_89878_+	DUF1419 domain-containing protein	NA	NA	NA	NA	NA
WP_037093340.1|89889_90291_+	DUF3085 domain-containing protein	NA	NA	NA	NA	NA
WP_065653706.1|90406_95509_+	N-6 DNA methylase	NA	I6WLR1	Burkholderia_virus	42.6	0.0e+00
WP_037094507.1|96041_97787_+	plasmid partitioning protein	NA	NA	NA	NA	NA
WP_037094510.1|97880_98357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094512.1|98353_99241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114345.1|99779_100052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094514.1|100531_101119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094517.1|101416_102343_+	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	47.5	6.6e-73
WP_037094520.1|103302_105744_+	DEAD/DEAH box helicase	NA	A0A2H5BGG3	Vibrio_virus	27.3	9.4e-18
WP_024318408.1|105780_106080_-	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_037095048.1|106581_107790_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037095042.1|107783_108701_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037095038.1|108697_109750_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A160DHK1	Gordonia_phage	27.4	2.5e-07
120243:120259	attR	ATGTCGAGATCGGCGCC	NA	NA	NA	NA
>prophage 2
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	143828	194086	2569444	transposase,integrase	Streptococcus_phage(33.33%)	42	146468:146527	202058:204511
WP_037095196.1|143828_144542_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	34.1	1.3e-23
WP_081950783.1|145241_146429_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
146468:146527	attL	CGTCCAAACGGGACCCCCATCTGCAATGGGGTTACAACAGCCTCCGGTTTCATCGGAGGC	NA	NA	NA	NA
WP_052821263.1|146538_148038_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_003501246.1|148039_148774_+	ATPase	NA	A0A2L1IVB6	Escherichia_phage	31.2	1.5e-32
WP_027677343.1|150514_151267_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	47.1	5.0e-63
WP_052821462.1|151285_152839_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	44.5	1.3e-110
WP_156779258.1|155426_155789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111794972.1|157961_158396_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003501168.1|158392_158746_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_139009121.1|159451_160024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093092.1|160020_160614_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_081950706.1|161245_161815_+	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_003501174.1|161853_162216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035228678.1|162393_162780_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003501178.1|162776_163397_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003501180.1|163398_165399_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_107341912.1|165416_166535_-	ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003501186.1|167375_168077_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_003501188.1|168073_168586_+	signal peptidase II	NA	NA	NA	NA	NA
WP_003501190.1|168755_169172_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003501192.1|169461_170790_-	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_107342001.1|171072_171549_-	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_080723265.1|171734_174389_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.8	3.9e-134
WP_003501205.1|174616_175573_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003501207.1|175664_176363_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_035226354.1|176386_178033_-	phosphoethanolamine--lipid A transferase	NA	NA	NA	NA	NA
WP_107341923.1|178096_179095_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_037093096.1|179194_180070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035226356.1|180066_180705_-	DsbA family protein	NA	NA	NA	NA	NA
WP_003501216.1|180833_181772_-	cation transporter	NA	NA	NA	NA	NA
WP_107341922.1|181927_182794_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_035226358.1|182783_183026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035226534.1|183018_183975_-	SMEK domain-containing protein	NA	NA	NA	NA	NA
WP_035226360.1|184136_185285_-	DUF1612 and helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_037093101.1|185492_185924_-	mRNA interferase PemK	NA	NA	NA	NA	NA
WP_037093103.1|185910_186189_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_081950707.1|186386_187430_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_052114262.1|187529_187769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114264.1|188708_189704_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_037093106.1|189700_190888_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_052114263.1|190884_192057_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_037093109.1|193147_194086_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	35.3	1.2e-32
202058:204511	attR	GCCTCCGATGAAACCGGAGGCTGTTGTAACCCCATTGCAGATGGGGGTCCCGTTTGGACGCTAGGGTCAGGACCCATTGATTTGAACTGACGGCTGTGATTCAGATGGGCGTATAGGAGCCCGACTGATGAGTAATTTGTTTTGGCTGACGGACGAGCAAATGGCTCGTCTTCAGCCCTATTTCCCCAAGAGCCATGGCCGCCAGCGCGTTGATGATCGACGCGTTCTGAGCGGCATCATCTTCGTCAACCGCAACGGGCTGCGTTGGCGTGATGCGCCGAAGGAATATGGCCCGGCGAAGACGCTTTATAACCGCTGGAAACGCTGGGGCGACAAGGGCGTATTTATCCAGATGATGGAAGGTCTGGCCGTGCCTGAAGCCGCAGAGCACAAGACCATCATGATCGATGCGACCTATCTCAAGGCCCACCGCACGGCTTCCAGCTTGCGGGTAAAAAAGGGGGCGCGGGCCGCCTGATTGGACGCACGAAAGGCGGCATGAACACCAAGCTTCATGCCGTAACGGATGCGAGTGGTCGCCCGATCAGCTTCTTCATAACGGCAGGCCAGGTCAGCGATTACACCGGTGCTGCCGCCTTGCTTGATGAACTTCCCAAGGCCAAATGGTTGCTGGCCGACCGTGGCTATGATGCCGACTGGTATCGTGACGCTTTACAGGCGAAGGGGATCACTCCCTGCATTCCAGGTCGAAAATCCCGCAAGAAGACCATCAAATACGACAAACGCCGCTACGAACGGCGCAACCGGATCGAGATCATGTTCGGGCGTCTCAAAGACTGGCGGCGTGTCGCTACGCGTTACGACCGGTGCCCAATGGCCTTTCTCTCCGCCATCGCTCTCGCTGCGACCGTTATCTTCTGGCTATGAGCAATGAGTCCTGACCTTAGACAGGTCTTACTCGCAGATCACAAACGGTCCGGTTTTGCTTCGGCGGTGTTACGCCCGGCATGCCTTTAGACCTACCTTACCCACTGCATGCCATCGATCTGGATGTCCTGACCGGTGATGAAATTGGGCTCCGCAGTGGCCAAGAACGTCACGACGCTTGCAACATCCTGAGGGGTTCCCACGCGTCCGAGAGAGATTCCGGCAGCGAGGCTCGTCTCTCGGGCGTCAATCATTGCGTTCGAGCGTTCGGTCTTGATGACACCGGGGCAGACGGCGTTGACGACGATCTCCGGTGCAAGTTCCTTCGCCAGCGCCTTGGTCATGCCGATAATCCCCGCCTTGGCCGCGGTGTAGGAGAACTTGCTGACGGCGCTGGTGACACCGCCGGTATGGGCATTCATCGAAGACATGTTGATGATACGCCCGCCGCCGTTGCGGCGCATGACCGGCACGGTCGGCTGGATGTAGTTGAATGCGCCCTTGAGGTTGATGGCGATCGTATCGTCGAATTCCTGCTCGGAAATTTCCTCGATCCCCTTCGACATCGAGCGGCCGGCATTGTTGAAGAGGACGTCGATACGGCCCCATTGGCGATCGACTTCGGCCGCGATTTCAGCGGCGCGGGCGTGATCGCTGACATCGGCGATGAAGGTCAGCGCCTTTCGGCCGAGTTCGCGAATTTCCGCAGCCGTTCGGGCAAGGTCGTCCTCGATCAGATCGACGGGGGCGATATCGAAGCCGTGGCGGGCAAGATCGAGAGCGCAGGCCCGCCCGATGCCGCGACCGCTCCCGGTGACGATCGCGACTTTTGCTTGTCCGTCAGACACCGGATGCCTCCCTCACGAAGCGGGCGATATCCGCATGGGTGGCGAACCAGACATCGTCATGCGCCTGGATATGCCGGATCAGCTCTTCGAGAATGAATATGCGGGAGCGATAGCCTGTTACATGCGGGTGCATGGTGAGCAGGAAAAGCCCCTTTTCCTGATAGGCGCGGTCGAATTCACGCTTGAAGATATCGAGAACGGCGGTTGGCGGGGTGTAAGGCCTGAGCGCGGTGAAGCGGTTCATGTTGAAATAGACTGCGTCGTCGCGGATCCATTCGACCGGCAATTCGACCATTCCTGTCGCTTCGCCTTCCTCGATCAGTTCGTAAGGGTCGTCATCCGCCATCAGCGAGGAATCGTAGATCAGACCCAGTTCGCGCTCGATCTCCAGAGTGACCGAGGAGAAATCCCAGGATGGCGTGCGCATGCCGACGGGGCGGATGCCGGTGATCTTTTCCAATGTATCGGCGGCGCGGAAATGCAGTTCGCGCTCCTTTTCCGGCGGCACCTTGGTATTCACCTCATGGATCCAGCCATGCAGGCCGATCTCGTGGCCTTCGGCAATCACGCGCCGCTGTTCGTCGGGATAGAGCAGGGCGGTGACGGCAGGTACGAAGAAGGTCGCTGGCACCGAGGCGGTCGATAGCGTTTCCAGAATACGCGGCACGCCCTTGCGATTGCCATACTGGCCCTGCGACATACGGCCGATGGATTCGCC	NA	NA	NA	NA
>prophage 3
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	200546	227820	2569444	transposase,integrase	Planktothrix_phage(20.0%)	24	223503:223533	226813:226843
WP_052821263.1|200546_202046_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_137040350.1|202184_202944_+|transposase	IS5-like element ISKpn12 family transposase	transposase	NA	NA	NA	NA
WP_037094428.1|203037_203793_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_037094429.1|203785_204670_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_065653662.1|204692_206405_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.9	9.8e-22
WP_037094440.1|206401_207277_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_037094442.1|207276_208248_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_037094456.1|208318_209020_-	creatininase family protein	NA	NA	NA	NA	NA
WP_065653707.1|209249_209789_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037094446.1|209785_211378_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037094459.1|211436_212390_+	isoaspartyl peptidase/L-asparaginase	NA	NA	NA	NA	NA
WP_037094450.1|213152_213920_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_037094454.1|214942_215395_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_065653663.1|216801_217503_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	43.8	1.5e-40
WP_084796579.1|217547_217784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037095081.1|217945_218536_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_034499453.1|218528_219758_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_156779259.1|220070_220815_+|transposase	IS5-like element ISKpn12 family transposase	transposase	NA	NA	NA	NA
WP_156779260.1|220863_221623_+|transposase	IS5-like element ISKpn12 family transposase	transposase	NA	NA	NA	NA
WP_081950782.1|221953_222709_-	DNA-processing protein DprA	NA	S6BFL3	Thermus_phage	41.6	9.6e-38
223503:223533	attL	GCATAATGCCGCGATCCGGATTATGCCGCAT	NA	NA	NA	NA
WP_037094818.1|223622_224831_+|integrase	tyrosine-type recombinase/integrase	integrase	W8EHC2	Mycobacterium_phage	26.2	1.4e-09
WP_037094814.1|224830_225772_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037094807.1|225768_226758_+|integrase	site-specific integrase	integrase	A0A142F1N9	Bacillus_phage	27.3	4.3e-22
WP_037094821.1|226986_227820_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
226813:226843	attR	ATGCGGCATAATCCGGATCGCGGCATTATGC	NA	NA	NA	NA
>prophage 4
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	314651	371988	2569444	transposase,integrase	Stx2-converting_phage(10.0%)	58	315975:316034	364423:373141
WP_113731869.1|314651_315790_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	8.8e-19
WP_080600525.1|315973_316267_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	56.1	2.8e-17
315975:316034	attL	TGGTCAAACCGGGACGCCTGCCTGTCGTAGTTGCTCGGTCAGCTGACGGGAATATTCGGG	NA	NA	NA	NA
WP_006473175.1|316475_317285_+	phosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.4e-13
WP_037094700.1|317281_318130_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_006473411.1|318200_319007_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_003501101.1|319020_320019_+	2-hydroxyacid dehydrogenase	NA	M1GWB3	Acanthocystis_turfacea_Chlorella_virus	27.6	3.3e-17
WP_003501100.1|320031_320952_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024710158.1|321298_321895_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	49.5	2.4e-39
WP_003501095.1|321887_323540_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_024710159.1|323539_324517_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_052114287.1|324672_325920_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_052114288.1|325919_327131_-	SIR2 family protein	NA	NA	NA	NA	NA
WP_143524116.1|327461_328598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_143524117.1|328657_329473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093587.1|329548_330361_-	streptomycin kinase	NA	NA	NA	NA	NA
WP_037093559.1|330465_331020_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	43.6	6.6e-28
WP_037093560.1|331214_332036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093561.1|332235_333198_-	XcyI family restriction endonuclease	NA	NA	NA	NA	NA
WP_037093562.1|333194_334055_-	site-specific DNA-methyltransferase	NA	S4VZJ3	Pandoravirus	60.6	1.8e-93
WP_037093565.1|334738_337711_+	AAA family ATPase	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	29.1	3.8e-05
WP_037093566.1|337754_338438_+	SOS response-associated peptidase	NA	B7SYF4	Stenotrophomonas_phage	43.3	2.9e-25
WP_037093567.1|338463_338760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156779261.1|338918_339089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093569.1|340041_341313_-	Y-family DNA polymerase	NA	A0A1W6JNT0	Morganella_phage	44.4	2.4e-89
WP_152596161.1|341309_341696_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A218MND2	uncultured_virus	44.9	4.6e-20
WP_037093571.1|341916_342264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093572.1|342279_343029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114374.1|343343_343862_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037094739.1|344586_345042_+	protein psiB	NA	NA	NA	NA	NA
WP_037094741.1|345182_346037_+	hypothetical protein	NA	A0A2K9V3V9	Faecalibacterium_phage	29.2	7.8e-20
WP_037094737.1|346065_346512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094735.1|346522_346759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094732.1|346805_347111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081950768.1|347293_347572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037094726.1|347757_349368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094723.1|349357_350380_+	dienelactone hydrolase-related enzyme	NA	NA	NA	NA	NA
WP_037094721.1|350839_351037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094717.1|351134_351386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094714.1|351382_352438_-	ATP-dependent DNA ligase	NA	A0A068CDF3	Rhizobium_phage	59.2	5.9e-110
WP_037094711.1|352548_352755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093573.1|353438_355367_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	32.4	1.5e-34
WP_037093574.1|355435_355615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093576.1|356197_357478_+	replication protein C	NA	NA	NA	NA	NA
WP_081950730.1|357492_357981_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_037093578.1|358376_358709_+	DUF736 family protein	NA	NA	NA	NA	NA
WP_037093580.1|358828_359035_+	antitoxin VbhA family protein	NA	NA	NA	NA	NA
WP_037093581.1|359088_360165_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_037094818.1|361102_362311_+|integrase	tyrosine-type recombinase/integrase	integrase	W8EHC2	Mycobacterium_phage	26.2	1.4e-09
WP_037094814.1|362310_363252_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037094807.1|363248_364238_+|integrase	site-specific integrase	integrase	A0A142F1N9	Bacillus_phage	27.3	4.3e-22
WP_006473174.1|364520_364715_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	54.8	1.7e-15
WP_006473175.1|364923_365733_+	phosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.4e-13
WP_037094700.1|365729_366578_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_006473411.1|366648_367455_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_003501101.1|367468_368467_+	2-hydroxyacid dehydrogenase	NA	M1GWB3	Acanthocystis_turfacea_Chlorella_virus	27.6	3.3e-17
WP_003501100.1|368479_369400_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024710158.1|369746_370343_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	49.5	2.4e-39
WP_003501095.1|370335_371988_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
364423:373141	attR	TGGTCAAACCGGGACGCCTGCCTGTCGTAGTTGCTCGGTCAGCTGACGGGAATATTCGGGATCAAGGGTGCCCGCCAGGAAGGCGCGGATATACGGACATGCGCTGTGGCTTTCCCTCCTTGGCGCTTCGGGTGCAGGAGGTTCTGCAGCATGATCCGTTGTCAGGGCATCTCTTCGTCTTCAGGGGCCGCAGATCGGATATTTTGAAGATCATCTGGCATGATGGTCTGGGCGCCTGCCTTTTTACCCGGCGGCTGGAGAAGGGCCGGTTTATCTGGCCGAATATGGGATAGCATCCGTCAAGGTGGTGTAGAATTGGGACCGGGCCGTCATGATCAGGCGGCTCTGGGTGAAATTTCTCCATCGCAGCTACGCGAGGAGGTAGAGCTGAGTTTAAGTGCTGTCATTGAAGTTTCACGAGCCTGATAAACGGACGTCATATGTCGCCCATAGTGATGCAAATATTCAATCGATGCACCACTAACGATCAGGATTATTGTGATGCTGGCTCTGAACGGAGTTGCCGTGACCTATGCCAACGGCACCCAAGCTTTGAAGACAACGACATTGACGTTCAACCAGGGTCAGTTCGTCGTGCTCCTCGGTAGATCCGGCGCAGGCAAATCTACCCTCATCCGGACACTCAACGGCTTGGTTGCGCCGACGTCTGGTTCGATCACTTCTAACGATATTGGTGCTCTGGATGCGGAAACTAAGCTTCGCATTCACCGAAGGCGAACTGGGATGATATTCCAGCAGCACCAACTCATAGGGCGCTTGAGCGCGCTCGACAACGTCATGACGGGCCGCCTGGGCTACCACTCTGGCTGGCGTACGTTGTTCCCTATGCCGCGTTCGGATCGAAGGCTGGGGTTGGAATGCCTTGAACGCGTAGGCCTTCTTGATAAGGCTCTCGTCAGGGCGGATCAACTATCCGGCGGTCAGCAGCAACGGGTGGGCATTGCGCGCGCGCTGGTCCAGAAGCCCCAACTGGTCCTTGCAGATGAGCCCGTTGCAAGTCTGGACCCTGAAACGGCTGTCGAGGTCCTGTCGCAGCTTCGCGAAATATGCACAGCCGACGGCATCACTGCTGTGATCAGCCTTCATCAGATCGATCTAGCTCGCCGGTTCGGCGACCGGGTCATTGCTATGCGCGACGGGGAAGTGGTTGCGGACGCCGCTGTCGACGAACTGACCGATCAAATGTGTGCGTCGATCTACCGCAGCGCCCCAAGAAATCCGACCACAACACAAGATTTGTCCAACTACGAGTATGATCAACCTTTAGCTGCCATGGAGGCCGCATTATGAAGAAGCTTCTGTCCCTCGCATTCCTCGCCGTTCTTGGCTGGAGTTCGTTGGCGCATGCTGGCTCAAATCCAGAGACATTGCGCGTCGCGTTGCTACCGGACGAGAACGCCGCCACTGTCATCAAAAACAATCGTCCTCTCGAGGAGTATCTTGAGAAGACACTCGGTCGGGAGATTGAACTGATCGTAACGACCGACTACTCGTCAATGATCGAAGCGATGCGTTTCGGCCGGCTTGAGTTGGCTTATTTCGGGCCGCTCTCTTACACGCTCGCGAAAACCAAGGCTGATATCGAGCCTTTCGCAGCACTTATGAAGGATGGCGAAACTACCTATCGCGCTGTAGTTGTCGCCAATGCAGAGGCTGGCATCGAAAGCCTTGAAGATGCAAAAGGGAAAAAGGTCGCGTTTGGGGACGTGGCTTCCACCTCAAGCCACCTTATCCCGAAATCTATGCTGCTTAAGGCCGGAGTTGAGGCTGGAAAAGACTATAGCGAGAACTTCGTAGGGTCGCATGATGCCGTGGCTATTGCAGTGCAGAATGGCAATGCTCAGATTGGCGGACTTTCGTTGCCCATCTACAATTCAATGGTCGCTCGTGGCACCATTGATCCTAAGAAAGTTATCGCCCTCGCCGAGTCCGATCCGTTCCCGCAGTACCCCTGGACCATGCGGTCGGATCTTGACACTTCGTTGAAAGAGGCGATCACCAAAGCCTTCATCGACCTTAAAGACGAAAAGGTATTGGCATCCTTCAAAGGCGATGGGTTCGCTCCGATCGATGACAAAGCCTACGACGTCGTCCGTGAGCTCGGTAAAGTGCTGAACTTGGACCTGAGTCAGTAAGGCGCGTTCGAGACAGTTTCTCACCTTTCGACGCAGGCGCTGGCCTGCGTCCTTTCTTCCAGGATATGTGATGACACAGCCGTCGGCCGACTACGACTCTATCCTTCAACATCAAAACAAAGCTTGGACCAGAGCTGGCGTGATCGCGTTGGCAATTGCGTGTGTGATCATTGTTAGCAGTTATCACTCCGGTCTTCTTGATCTGGAGCGTCTGGGATCTGGGTTTCCTGCGCTCTGGCAGCTCGGTACGGAAATGTTTCCCCCGGATTTCAACCGAGGCTTGGAGTGGATCAGCCCTCTCATCGACACTCTGGCGATGAGTATAGCTGGGACTGCGATCGCGGTACTGATATCACTTCCAGTTGGCTTTTTCGCCTCAGGGAAAACAGCACCCAACGCTGTCATCTATATGATCTCGCGTGGATTGTTGAATGGTCTACGGTCGATCCCGGAGCTGATTATGGGCATCGTCTTCGTGGCGGCAGTGGGATTTGGAGCGCTCCCAGGCGTGCTGGCTCTTGGTCTTCACTCGGTTGGCATGGTGGGCAAGTTCTTTGCGGAGGCGATCGAGCATTGCGATAATGCGCCTATAGAAGCCGCACGCGCAGCTGGTGCGTCGCCGTTCCAGATCGTGACGCGGGCGATCTTGCCACAAGTTCTACCGCAATTGGCCGATGTGACCATCTATCGGTGGGAGTACAACTTCCGCGCCTCGACAATCCTGGGCACTGTGGGAGCTGGTGGTATCGGTTTCGAGTTGATGACATCCCTCCGGATCATGAATTATCAGGAGGTTCTTGCGATCATGCTCGTTGTCCTTCTGATGGTCACCATCGTTGACCAGGTCGGCGCTCTCCTCCGCCGCCAGCTGCAATAGAAGGATAAATTAAATGCTCCCAAAGGTAGTAATCACCCATCGCGTCCACGAGGAGATTATCTCAAAGCTATCTCCCCACGCTCGTTTAGTTTGCAACGATACTGATGATACATGGCCCCGCGAGAAACTGCTCGCAGAATTGAGCGACGCCAAGGCGATGATGGCGTTCATGCCGGACATGATCGACGCGTCTGTACTCGCGCACGCTCCCGATCTTCAACTTGTGGCATGTGCGCTGAAAGGCTTCGATAACTTCGACATCGAAGCCTGCACGCAGCGTGGAGTCCACGTCACGATAGTGTCCGATCTTCTCACTGACCCGACAGCCGAACTTACAATCGGTCTGATGATTGCTCTTGGGCGGCACATTCTGCCAGGCGACAAGAGCGTCAGGAGGGATTACAAAGGTTGGCGCCCTCGGTTTTACGGCCTTGGGCTGCAGGGCACAGCAATCGGCATTTTAGGGATGGGAGCGATCGGAAAAGCTATAGCACAGCGCCTAAGTACCTTCGGCGCCATTGTGTCGTACTGGGATCGTCAATCCCTGGACAAAGCCGATGAGATCAGACTGAACGTAAAGCCTCTTGAATTTGACCAGTTGATCTCGTCGTCTACCTTTCTTGTGTGTGCACTCCCGCTTTCGGCCGAAACGAAGCATCTCCTCGGCGCTGAACAACTCGCCAAAATGCCCAAAGGAGCACTTCTTATTAATCCTGCACGCGGAAGCGTGGTTGATGAAGAGGCTGTTGTCGCTGCATTGCAGGCGGGGCGCTTGGGAGGCTACGCCGCTGATGTTTATGAGATGGAGGACTGGGCCAGACCCGACCGGCCTGACAAGGTCCACGGGGGTCTCCTCAATCGCGAACATGATTCGATCTTGACACCCCACATAGGCTCAGCAGTGGCGAAGTCGCGTTTGGCTATCGAGCACGAGGCTGCTGACAACATTATAGATTTTGTCCAAGGCCGAAGACCTCGTGCGGCAATTAACGAGGTTCAACTAATTCCTTGATTAGAGAAAGTAATGTTTAGCCTTTCGCATGTCGCAGCATTCATAGAGGTAATCGAAACTGGCAGCTTTCACGAGGCGTCGCGACGGCTTCAGATATCCCAACCGACTGTCTCACATAATGTGAAACGATTGGAGGATATACTAGGGGTGCGGCTGGTCGAGAGGAGGAAGGACAAGTGTGTGCCGACTCGGCAAGGGCTCGTATTCTTGCCATTCGCACGCAGCCTTTTGACCGTCACGAAGAGATCTCTGGACCGCCTGCACAGCGGCCGGATTACGTTGGGTGCCAGTACTAACATCGGTACCTATATTTTGCCAGTCCACTTGAAGCGTTTACAGGATGCTCAAGGCCGGCCACCTGAGGTGGCCGTTGCCTCAAATCCTGAAATCATCGAAAAGCTCTTGAGGAAGGAGATTGATCTAGCCTTTACCGAATGGTGGGACGATCGAAAAGGATATCAAGCCCGCCTTTGGCGGAAGGAAAAGCTGGTAATAATCGTATCCCCACAGCATAATTGGAGGACGCGAAAAACAATTGAAGCGGCAGAGTTATTTCAAGAGTCCCTCATTGGCGGAGAACGTGGAACCGGTACCGGATCCGTGCTCCGCGAGGCCTTCGGCCAAGCGGCAGAGCAATTCCCAATCTCATTCAATGTCGGGAGCACTGAGGCTGTGAAGCATGCAGTTCGAGCTGGTCTCGGCATTTCGATCGTGATGAGGAGCACTGTCCTCGATGAGCTCGCGTCGGGTAGGCTTTATGAGGTTTCTGTTGAGAATGTGGTTCTCGAAAAGTCTGTGTGGGCTGTACATCCCGTACATATGGAGGATGGTTCACCGGAAGCAATCGCGCTTAAGGTTATACTCGATGCGAGCGCCCCTCTGGGTGACCTAGAGCACGTCCACATTACTCGGGGTCATATCCGCAAGATTTGAAGTAGTTGGCGCATTCCTGCGGCTCGAACATGGTAACGGCCTGGCCGACCGCATCCTTTGGTATCGCCGCCTCAATTCCCGGAGTATCCCATACAAGGGGGACAAGATCGGGGACCGCCCGATTTTCGATGCGTAAGGTTCCCTGCTCCATGTCGCGAATATTCGGCCGTCAGACACATAGTTGGTTTCCATGGATCGTTTGTCATAAACGAGGGTTTTTGAGCATGCCATAGCGCATGCCGTCACGCCCCTTGAATGGCGCGATGGAATCTTCTCAAAACTGTTATAGAAACGGTTGTCGCAAAATGCTATGTGTCCAACGACTTTCAAGAACATTTGGATGGCTATGCGGGTCGGGTACGCCAGGGTCAGCACGATCGATCAAAATCCGGAGCTTCAGCTTGAGGCGCTGAGACGCGCCGGTTGCGAGAAGGTGTTTACCGAGCGCGGGTCAGGCGCTCGCGATGACCGCCCGGAATTGGGCCGAATTCTCTCCGACGTGCTTCGCACTGGTGACACGCTCGTTGTCTGGAAACTCGATCGGTTGGCGCGATCGCTAAAGAAGCTCATCGCGACGGCGGAAGAGTTGGAGCGCGCGAAGATCGGGCTCGTGTCCTTGACCGAGAGCATTGATACGACGACGCCGGGCGGCATGCTGACCTTCCATGTCTTCGGTGCGATCGCCCAGTTCGAACGTGCTCTGATCCGCGAACGCACGACGGCTGGACTGGTCGAGGCGCGGCAACGTGGCCGCAAGGGTGGCCGCCCGCCCGCGATGCGCCCGGGCGATATTGCCGCGGCGCGCGCCCTGATGAAGGAAGGCAGCATACCGGTACGCAATATTGCGCAGCGCATGGGGGTTTCTGTTGCAACCCTCTATCGTCATATCGGCAAGAAGGGTGGCTCTCCCAAAACAGTGGAATCCGAGGACGTCCATGGCTGAGCGGAGAAAGCGGCCGCCCGGAGAGGCTCTTGTCGATCTTCGACGCCGATTGTCGCTGCTTTCTCCCCGTGATCCAGGCCGTACCGAGATTGTTGCTCGTGCCGCCGATGCCTACGGCATCTCGATCTGGACCCTGTATCGGGCGCTGCGGGAGTTGAACCGCCCGAAATCCGTACGGCGCGCCGATCACGGAACCTCCCGGATCGCCCCGCAGCCGGAGATGGAAACCTATGCCGAAATCATCGCGGCCCTGAAGATCAGAACGGCGAACCGGAAGGGGCGGCATATCTCCACGGCGCGCGCCATCAAGCTGCTTGAGGAAGACGGCGTGGTGACGCCCGATGGCCTGGTCCGTGCACCGCCCGGCATCTTGAAACGCGCAACGGTCGATCGGCTGCTGCGTGTTTCCGGCCTGGATTATGCGCGCGTCACCCGCCCGGTGGCTGCCGTCCGATTCCAGGCGCGGCGTTCCAACGAACTCTGGCACTTCGACATGAGCCCGTCCGACCTGAAGCAGGTGGAAGCGCCGCTTTGGGTCGAGGAAGGGCGCGGCCGGCCGACGCTGATGCTGTTCTCCGTGGTCGATGATCGCTCCGGCGCGAGCTATCAGGAATACCGCTCCGTCTACGGCGAGGACGCGGAGTCCGCCTTGCGCTTTCTCTACAATGCCTTCGCCGCCAAGCCTGAACCGGAACTGCCGCTTCAGGGGATTCCAACGACCATCCATATGGATAACGGGCCGGTGAGCCGCTCGCGCGTTTTCCAGTCCGTCATGGGTAGCCTTGGTGTCCGGGTTCTCACGCATATGCCCCCGTCGGACAGCGAGCGGCGCACGCCGGCGCGAGCGAAAGGCAAGGTCGAGCGGCCGTTTCGCACGATCAAGGAAGTGCACGAGACCCTCTATCATTTCCACAAGCCGAAGGACGAAGAGGAAGCCAACCTTTGGCTCAGGCGCGCCTTGGTCACCTACAATAACGGCGACCATCGCACAGAGTCTCATGCACGCATCGAGGATTGGCTGCGGCATCTTCCTCCTGACGGGGTGCGGGCGATGTGCTCCTGGGAGCGGTTCTGCGCCTTTGCGCGCGAACCGGAACGACGGACGGTTGCTGGAGACGCGACCGTATCGGTCGAAGGCGCATCCTATGAGGTCGAGCCCGAACTTGCCGGCGAAACGGTGACCTTGCTCTGGGGCCTGTTCGATCAGGAACTGTTCGTCGAGCATGAGGGCAAGCGCTTCGGTCCATTCCAACCTTCGCGCGGGGCGGTTCCCCTCTTTCGCTATCGCAAATACCAGAAGAGCAAGCTCGAAGAGCGGCTCGACAAGGTGGTGCGCCTGGCAGACCAACTTGGGCTCCCCCGCGCCGCGGTCACCGGCGGGGATCGTCCATTGCCTTCGCTGCCCCCGACCACGGCTGGGCTGAGTGTACGGCGGACACCGTTTCCGGAACCCGCAATAGAGACCGCTTATCCAAATGGCCTCGCAGCCCGTGGGGCCATCGCCGACCAGCTCGGCCGGCCGATCGGCGCGATGAATGCCGGTGACCGCGCCTTCATCAATGAACTGCTTGGAGAAACACTCGACAAAAAGATGATCGCGGCCCGTATCCGCGAACGCTTCCAGGCGCGAAGAAAGGAAGAATGATGCTCGCTGACGTTCAATCCAGTTACGGCCTCGACCGGCCTTTCCAAGGGGCCGGCAACTTTGAGACCGAGCATCAGCGCACGATCATCCGCGAGGTGTGTGCGGCCGTCCAGACCGGTCGGCTTGTCGTGGTCTCCGGCCTGGTCGGTTCGGGGAAAACCCACCTTTTGCGCCGCATCGAGGCCGAACTCACCAAAGCCGGCAAGGTCGCACTCGCCAAATCGCTGGCGGTCGACAAGCGGCGCACTTCGCTGCCATCGCTCATTGAAGCCCTGTTCTACGACTTGTCTCCCGGCGATCGTGCGCAGGTCAAGATCCCCAAGCAGGCCGAGCGCCGGGAGCGCGACCTGCGCGACATCATGAAAAAAGGCAAACGGCCGATCGTCCTCGTGGTCGACGAGGCCCATGACCTGCACCACAAGACCTTAACCGGCCTGAAGCGACTGATGGAGGTGGTCGCCGACGCCGGCGTGCTCCTTTCCGTACTTCTTGTCGGGCATCCCCGGTTGCGCAATGATCTGCGCCGGCCGCAAATGGAGGAGATTGGCTACCGCACGACCATTTTTGACTACGAGGGGATCGGCTCCGCGCGCCGCGACTATGTTGCCTGGCTGCTTGGCGCCTGTGCGGCCGAAGGCGTAAAGGTTGGCGAACTCCTCGAGGAAGAAGCCATCGACCTCATCGCCGAACGTTTGCGCACGCCGCTTCAGATCGAGATGCATCTCACCCTCGCATTCGAGCAGGGCTTTCGCCTCGGCGCCAAGCCGGTTACCGCCGAAATCGTCGAGCAGGTCCTGTCCCGCGCCATCGACGATCTCGAACCGACGTTGACCCGAAATGGTTACGATGCGACGGCTCTGGTCACGCACCTCAATGCTCGGCCGTCGGATATCCGCGCCTTCCTGGCGGGCACCCTTGATCCCGAATATTCCCGTCAGCTGACCGAGCAACTACGACAGGCAGGCGTCCCGGTTTGACCATGCCGTCGCTGGCAATTAATCTGAGCACGTGGCGGATGTTTGCAAGCAGACCCGGATGTTTGCGAGCACATTGGCAAAGAGCGTGAGCACGACGCCCGCTCCATTGTCAGATAATTCGAGCAGAAAATGCCGATGTTTGCGAGCAGAGGCGCTTATGTTGGCAAGCCGCTACA	NA	NA	NA	NA
>prophage 5
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	611089	685953	2569444	transposase,holin	Enterobacteria_phage(20.0%)	60	NA	NA
WP_022563826.1|611089_612604_-|holin	choline-sulfatase	holin	A0A1V0SA98	Catovirus	24.7	4.3e-21
WP_037092564.1|612618_613572_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_004444701.1|613666_614563_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_037092565.1|614592_616044_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004444705.1|616060_616783_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	2.1e-10
WP_037092566.1|616775_617504_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_037092567.1|617500_618409_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_037092568.1|618405_619278_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_037092569.1|619348_620563_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004444714.1|621589_621889_-	HigA family addiction module antidote protein	NA	B0VK57	Azospirillum_phage	32.2	3.8e-06
WP_006697304.1|621944_622226_-	plasmid maintenance system killer	NA	NA	NA	NA	NA
WP_037092570.1|622300_623110_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.1	1.4e-13
WP_037092571.1|623106_624075_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_037092572.1|624077_625121_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_037092598.1|625117_626125_-	iron-siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037092573.1|626346_628467_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_004444723.1|628594_629470_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_081950676.1|629712_629889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037092574.1|630015_632187_-	catalase/peroxidase HPI	NA	NA	NA	NA	NA
WP_037092575.1|632392_633301_+	hydrogen peroxide-inducible genes activator	NA	NA	NA	NA	NA
WP_037092576.1|633320_633863_-	NUDIX hydrolase	NA	A0A1C3NEZ8	Phage_NCTB	32.3	6.3e-07
WP_022563805.1|633976_634621_+	DUF47 domain-containing protein	NA	NA	NA	NA	NA
WP_004444749.1|634620_635625_+	inorganic phosphate transporter	NA	E5ESL8	Bathycoccus_sp._RCC1105_virus	27.6	5.4e-12
WP_037092577.1|635712_636504_+	Ku protein	NA	NA	NA	NA	NA
WP_052114249.1|636513_637401_-	DNA polymerase domain-containing protein	NA	NA	NA	NA	NA
WP_034497990.1|637507_638335_-	Ku protein	NA	NA	NA	NA	NA
WP_004444758.1|638331_638619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004444761.1|638660_639554_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	48.2	2.1e-68
WP_037092578.1|639799_642139_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_037092579.1|642325_643429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052114252.1|643691_645230_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_022563796.1|645355_646336_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_004444769.1|646403_647117_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_037092581.1|647323_648352_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_037092583.1|648348_649248_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_037092584.1|649234_650080_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.8	8.6e-11
WP_037092600.1|651068_651875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037092585.1|652017_653094_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	34.5	1.0e-24
WP_006697331.1|653111_653954_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_037092586.1|653943_654876_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_037092587.1|654886_656158_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037092588.1|656207_657809_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_037092589.1|657814_658885_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_037092590.1|659083_659821_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_037092591.1|660234_662301_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	29.5	5.4e-67
WP_037092592.1|662655_663225_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	42.8	1.2e-35
WP_037092593.1|663227_664283_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.2	6.3e-96
WP_037092594.1|664287_665181_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	37.0	5.3e-35
WP_052114250.1|665177_666089_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	58.1	2.8e-92
WP_037092595.1|666133_667282_+	acyltransferase	NA	NA	NA	NA	NA
WP_113731869.1|668881_670019_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	8.8e-19
WP_037094903.1|670449_671799_-	FkbM family methyltransferase	NA	M4QNU8	Ostreococcus_lucimarinus_virus	27.6	2.7e-06
WP_081950774.1|671842_674599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_034498049.1|674855_675128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037095010.1|678430_679324_-	ATPase AAA	NA	U5N3V8	Enterobacteria_phage	33.8	6.9e-35
WP_037095007.1|679320_680820_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_113731869.1|682278_683416_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	8.8e-19
WP_034499355.1|683562_683946_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_037095105.1|683942_684287_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	31.6	8.6e-10
WP_065653644.1|684360_685953_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	32.9	3.4e-53
>prophage 6
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	1122803	1158955	2569444	transposase,integrase	uncultured_Caudovirales_phage(50.0%)	38	1113896:1113910	1166329:1166343
1113896:1113910	attL	GCGCTTGGCGATGAC	NA	NA	NA	NA
WP_052821263.1|1122803_1124303_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_003501246.1|1124304_1125039_+	ATPase	NA	A0A2L1IVB6	Escherichia_phage	31.2	1.5e-32
WP_113731869.1|1125266_1126404_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.6	8.8e-19
WP_156779265.1|1126488_1126830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152596160.1|1126921_1127290_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_052114285.1|1127296_1129081_-	PAS domain S-box protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.0	1.2e-14
WP_037093519.1|1129352_1132133_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_037093520.1|1132405_1132801_-	DUF2513 domain-containing protein	NA	A0A1Q1PVT8	Staphylococcus_phage	27.6	1.6e-07
WP_037093521.1|1132835_1133042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093522.1|1133429_1133924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093523.1|1133927_1134992_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_037093524.1|1135196_1136141_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_037093525.1|1136142_1136637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093526.1|1136633_1137530_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_037093527.1|1137529_1138696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114286.1|1138692_1139280_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_037093528.1|1139408_1140362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152596159.1|1140425_1141547_-	DUF1612 domain-containing protein	NA	NA	NA	NA	NA
WP_037093530.1|1142076_1142994_+	DNA invertase	NA	A0A0F7LA37	Escherichia_phage	51.7	1.6e-31
WP_084796572.1|1142953_1144054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093535.1|1144050_1144974_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_037093536.1|1144964_1146602_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_037093537.1|1146725_1147931_-	arsenite efflux MFS transporter ArsK	NA	NA	NA	NA	NA
WP_081950729.1|1147927_1148635_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	70.8	2.9e-89
WP_037093539.1|1148627_1149050_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	62.8	5.3e-46
WP_065653681.1|1149055_1150096_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_037093541.1|1150100_1150544_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_037093542.1|1150540_1151071_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	42.0	1.1e-27
WP_037093543.1|1151067_1151424_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037093544.1|1151465_1151987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093545.1|1152191_1152695_+	low molecular weight phosphatase family protein	NA	A0A2H4J437	uncultured_Caudovirales_phage	32.4	2.9e-06
WP_037093547.1|1152691_1153330_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_037093549.1|1153361_1153571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037093551.1|1153702_1154014_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_037093553.1|1153985_1155215_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_037093554.1|1155231_1156026_+	rhodanese family protein	NA	NA	NA	NA	NA
WP_065653682.1|1157040_1157787_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	43.8	2.0e-40
WP_081950783.1|1157767_1158955_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
1166329:1166343	attR	GTCATCGCCAAGCGC	NA	NA	NA	NA
>prophage 7
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	1563254	1595021	2569444	transposase,integrase	Escherichia_phage(20.0%)	33	1570812:1570841	1574121:1574150
WP_065653688.1|1563254_1564007_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	43.8	1.6e-40
WP_037094892.1|1564803_1565187_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_037094899.1|1565183_1565384_-	DUF2191 domain-containing protein	NA	NA	NA	NA	NA
WP_052114357.1|1565539_1566586_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	6.2e-11
WP_037094889.1|1566585_1567563_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.0	1.4e-17
WP_037094887.1|1567559_1568474_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_052114356.1|1568477_1569398_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_037094877.1|1569483_1570170_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	44.3	4.9e-41
1570812:1570841	attL	CATAATGCCGCGATCCGGATTATGCCGCAT	NA	NA	NA	NA
WP_037094807.1|1570895_1571885_-|integrase	site-specific integrase	integrase	A0A142F1N9	Bacillus_phage	27.3	4.3e-22
WP_037094814.1|1571881_1572823_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_037094818.1|1572822_1574031_-|integrase	tyrosine-type recombinase/integrase	integrase	W8EHC2	Mycobacterium_phage	26.2	1.4e-09
WP_037094052.1|1574486_1574858_+	DUF2958 domain-containing protein	NA	A0A1W6DX76	Sphingobium_phage	47.1	4.4e-20
1574121:1574150	attR	ATGCGGCATAATCCGGATCGCGGCATTATG	NA	NA	NA	NA
WP_052114322.1|1574857_1575637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052114321.1|1575633_1576068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094050.1|1576394_1578536_+	chromosome partitioning protein ParB	NA	G8DH78	Emiliania_huxleyi_virus	28.7	2.0e-27
WP_037094056.1|1578636_1578903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094048.1|1578899_1579196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_122521009.1|1579619_1579784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094047.1|1579959_1580325_+	nuclease	NA	NA	NA	NA	NA
WP_037094044.1|1580456_1581014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094041.1|1581082_1581484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094038.1|1581493_1581688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094036.1|1581759_1582176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094034.1|1582970_1587326_+	methylase	NA	A0A076FMQ0	Aureococcus_anophage	31.2	4.9e-17
WP_037094032.1|1587325_1588369_+	DNA primase	NA	A0A2I7R8M6	Vibrio_phage	31.7	3.8e-08
WP_037094055.1|1588700_1589636_+	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_037094029.1|1589776_1590193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037094027.1|1590915_1591317_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_037094024.1|1591809_1592184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151691280.1|1592738_1593137_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_037092225.1|1593254_1594100_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_037092224.1|1594107_1594515_+	DoxX family protein	NA	NA	NA	NA	NA
WP_081950654.1|1594514_1595021_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP016433	Rhizobium sp. S41 chromosome 2, complete sequence	2569444	1896287	1910726	2569444	terminase	Sinorhizobium_phage(41.67%)	19	NA	NA
WP_081950725.1|1896287_1897469_+	DNA cytosine methyltransferase	NA	A0A1C9LW16	Vibrio_phage	37.7	1.4e-19
WP_037093397.1|1897465_1897807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093396.1|1897803_1898637_+	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA	NA
WP_037093394.1|1898633_1899416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093392.1|1899412_1899874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093391.1|1899870_1900749_+	hypothetical protein	NA	A0A141GF38	Brucella_phage	33.1	2.7e-23
WP_152596150.1|1901294_1901621_-	hypothetical protein	NA	A0A2D2W6B5	Pectobacterium_phage	46.9	1.1e-06
WP_037093387.1|1901642_1902209_+|terminase	terminase	terminase	A0A076GD11	Sinorhizobium_phage	49.7	2.8e-42
WP_037093386.1|1902212_1903547_+	DNA-packaging protein	NA	Q1WDG8	Streptomyces_phage	42.1	4.9e-37
WP_037093384.1|1903546_1905400_+	DUF1073 domain-containing protein	NA	A0A2H4J4I9	uncultured_Caudovirales_phage	42.5	4.6e-126
WP_037093383.1|1905405_1906557_+	DUF2213 domain-containing protein	NA	A0A059VF71	Pseudomonas_phage	36.7	5.2e-43
WP_037093381.1|1906560_1907034_+	hypothetical protein	NA	A0A2D2W1Z4	Sinorhizobium_phage	41.2	4.0e-18
WP_037093379.1|1907037_1908024_+	DUF2184 domain-containing protein	NA	A0A2D2W280	Sinorhizobium_phage	53.4	3.4e-91
WP_037093378.1|1908085_1908370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093377.1|1908374_1908869_+	hypothetical protein	NA	A0A076G6I4	Sinorhizobium_phage	48.1	2.3e-24
WP_037093376.1|1908869_1909226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037093375.1|1909234_1909609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_152596149.1|1909632_1910304_+	hypothetical protein	NA	M4R217	Salicola_phage	40.4	2.4e-32
WP_052114277.1|1910303_1910726_+	HK97 gp10 family phage protein	NA	A0A076G8G8	Sinorhizobium_phage	35.5	3.0e-12
