assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001688685.2_ASM168868v2	NZ_CP015408	Lactobacillus reuteri strain I49 chromosome, complete genome	1	814032-814463	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas14j,csn2,cas2,cas1,cas9	DEDDh,cas3,RT,DinG,cas14j,csn2,cas2,cas1,cas9,csa3	Type II-C,Type II-A,Type II-B	GTTCTAAACATTATTGATTTGAAGTACATCTAAAAC,GTTCTAAACATTATTGATTTGAAGTACATCTAAAAC,GTTCTAAACATTATTGATTTGAAGTACATCTAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,6,6	6	TypeV,TypeII-C,TypeII-A,TypeII-B	DEDDh,cas3,RT,DinG,cas14j,csn2,cas2,cas1,cas9,csa3	NA,NA|160aa|down_4|NZ_CP015408.2_820901_821381_+,NA|75aa|down_7|NZ_CP015408.2_822744_822969_+,NA|165aa|down_8|NZ_CP015408.2_823630_824125_+,NA|64aa|down_9|NZ_CP015408.2_824535_824727_+	NA|293aa|up_9|NZ_CP015408.2_799431_800310_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|412aa|up_8|NZ_CP015408.2_800428_801664_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|234aa|up_7|NZ_CP015408.2_801684_802386_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|300aa|up_6|NZ_CP015408.2_802428_803328_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_5|NZ_CP015408.2_803408_804389_+	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|914aa|up_4|NZ_CP015408.2_804457_807199_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|671aa|up_3|NZ_CP015408.2_807354_809367_-	pfam02449, Glyco_hydro_42, Beta-galactosidase	NA|641aa|up_2|NZ_CP015408.2_809376_811299_-	TIGR00792, Melibiose_carrier_protein, sugar (Glycoside-Pentoside-Hexuronide) transporter	NA|340aa|up_1|NZ_CP015408.2_811457_812477_-	cd01544, PBP1_GalR, ligand-binding domain of DNA transcription repressor GalR which is one of two regulatory proteins involved in galactose transport and metabolism	cas14j|388aa|up_0|NZ_CP015408.2_812627_813791_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	csn2|224aa|down_0|NZ_CP015408.2_814491_815163_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_CP015408.2_815159_815465_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|303aa|down_2|NZ_CP015408.2_815442_816351_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1383aa|down_3|NZ_CP015408.2_816564_820713_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|160aa|down_4|NZ_CP015408.2_820901_821381_+	NA	NA|276aa|down_5|NZ_CP015408.2_821432_822260_-	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases	NA|111aa|down_6|NZ_CP015408.2_822262_822595_-	cd11540, NTP-PPase_u3, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|75aa|down_7|NZ_CP015408.2_822744_822969_+	NA	NA|165aa|down_8|NZ_CP015408.2_823630_824125_+	NA	NA|64aa|down_9|NZ_CP015408.2_824535_824727_+	NA
GCF_001688685.2_ASM168868v2	NZ_CP015408	Lactobacillus reuteri strain I49 chromosome, complete genome	2	1355512-1355601	2	CRISPRCasFinder	no		DEDDh,cas3,RT,DinG,cas14j,csn2,cas2,cas1,cas9,csa3	Orphan	TATTGACCGATTCCGCTAGCCAATTGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,DinG,cas14j,csn2,cas2,cas1,cas9,csa3	NA|158aa|up_2|NZ_CP015408.2_1351976_1352450_-,NA|280aa|down_2|NZ_CP015408.2_1358713_1359553_-,NA|160aa|down_3|NZ_CP015408.2_1359571_1360051_-,NA|431aa|down_9|NZ_CP015408.2_1364658_1365951_-	NA|290aa|up_9|NZ_CP015408.2_1342744_1343614_+	pfam00892, EamA, EamA-like transporter family	NA|453aa|up_8|NZ_CP015408.2_1343808_1345167_-	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|448aa|up_7|NZ_CP015408.2_1345261_1346605_-	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|776aa|up_6|NZ_CP015408.2_1346698_1349026_-	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|217aa|up_5|NZ_CP015408.2_1349224_1349875_+	PRK10847, PRK10847, DedA family protein	NA|218aa|up_4|NZ_CP015408.2_1349948_1350602_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|426aa|up_3|NZ_CP015408.2_1350631_1351909_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|158aa|up_2|NZ_CP015408.2_1351976_1352450_-	NA	NA|83aa|up_1|NZ_CP015408.2_1352687_1352936_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|66aa|up_0|NZ_CP015408.2_1352938_1353136_-	pfam05532, CsbD, CsbD-like	NA|179aa|down_0|NZ_CP015408.2_1357400_1357937_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|84aa|down_1|NZ_CP015408.2_1358254_1358506_+	pfam04024, PspC, PspC domain	NA|280aa|down_2|NZ_CP015408.2_1358713_1359553_-	NA	NA|160aa|down_3|NZ_CP015408.2_1359571_1360051_-	NA	NA|146aa|down_4|NZ_CP015408.2_1360110_1360548_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|191aa|down_5|NZ_CP015408.2_1360588_1361161_-	PRK00300, gmk, guanylate kinase; Provisional	NA|137aa|down_6|NZ_CP015408.2_1361167_1361578_-	cd03428, Ap4A_hydrolase_human_like, Diadenosine tetraphosphate (Ap4A) hydrolase is a member of the Nudix hydrolase superfamily	NA|464aa|down_7|NZ_CP015408.2_1361706_1363098_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|435aa|down_8|NZ_CP015408.2_1363273_1364578_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|431aa|down_9|NZ_CP015408.2_1364658_1365951_-	NA
