assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	1	263558-263653	1	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	CTGCACACCAAGATCACCCTGACCAATCC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA	NA|301aa|up_9|NZ_CP016380.1_250347_251250_-	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus	NA|388aa|up_8|NZ_CP016380.1_251396_252560_+	PRK15138, PRK15138, alcohol dehydrogenase	NA|509aa|up_7|NZ_CP016380.1_253067_254594_+	PRK09424, pntA, Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA|495aa|up_6|NZ_CP016380.1_254605_256090_+	PRK09444, pntB, Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA|251aa|up_5|NZ_CP016380.1_256185_256938_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein	NA|436aa|up_4|NZ_CP016380.1_257249_258557_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|467aa|up_3|NZ_CP016380.1_258722_260123_+	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|443aa|up_2|NZ_CP016380.1_260217_261546_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|252aa|up_1|NZ_CP016380.1_261687_262443_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|327aa|up_0|NZ_CP016380.1_262560_263541_+	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|246aa|down_0|NZ_CP016380.1_263793_264531_+	PRK10723, PRK10723, polyphenol oxidase	NA|858aa|down_1|NZ_CP016380.1_264906_267480_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|275aa|down_2|NZ_CP016380.1_267540_268365_+	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain	NA|331aa|down_3|NZ_CP016380.1_268574_269567_-	PRK05425, PRK05425, asparagine synthetase AsnA; Provisional	NA|154aa|down_4|NZ_CP016380.1_269721_270183_+	PRK11179, PRK11179, DNA-binding transcriptional regulator AsnC; Provisional	NA|255aa|down_5|NZ_CP016380.1_270277_271042_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|179aa|down_6|NZ_CP016380.1_271127_271664_+	COG5413, COG5413, Uncharacterized integral membrane protein [Function unknown]	NA|135aa|down_7|NZ_CP016380.1_271660_272065_-	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|235aa|down_8|NZ_CP016380.1_272185_272890_+	PRK06483, PRK06483, dihydromonapterin reductase; Provisional	NA|172aa|down_9|NZ_CP016380.1_272892_273408_-	pfam01288, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	2	543405-543480	2	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	GTTGGAGCCCAGGCTGATATAGA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA|148aa|down_5|NZ_CP016380.1_553594_554038_+,NA|111aa|down_7|NZ_CP016380.1_557340_557673_-	NA|636aa|up_9|NZ_CP016380.1_528182_530090_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|753aa|up_8|NZ_CP016380.1_530327_532586_+	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	NA|866aa|up_7|NZ_CP016380.1_532814_535412_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|321aa|up_6|NZ_CP016380.1_535480_536443_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|303aa|up_5|NZ_CP016380.1_536606_537515_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|206aa|up_4|NZ_CP016380.1_537591_538209_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|465aa|up_3|NZ_CP016380.1_538332_539727_+	pfam04030, ALO, D-arabinono-1,4-lactone oxidase	NA|376aa|up_2|NZ_CP016380.1_539736_540864_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|463aa|up_1|NZ_CP016380.1_540925_542314_+	PRK10504, PRK10504, putative transporter; Provisional	NA|161aa|up_0|NZ_CP016380.1_542323_542806_-	cd04332, YbaK_like, YbaK-like	NA|124aa|down_0|NZ_CP016380.1_543489_543861_-	smart00905, FolB, Dihydroneopterin aldolase	NA|221aa|down_1|NZ_CP016380.1_544037_544700_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|173aa|down_2|NZ_CP016380.1_546012_546531_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|618aa|down_3|NZ_CP016380.1_546856_548710_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|136aa|down_4|NZ_CP016380.1_548719_549127_+	pfam08786, DcrB, DcrB	NA|148aa|down_5|NZ_CP016380.1_553594_554038_+	NA	NA|448aa|down_6|NZ_CP016380.1_555969_557313_+	pfam07885, Ion_trans_2, Ion channel	NA|111aa|down_7|NZ_CP016380.1_557340_557673_-	NA	NA|172aa|down_8|NZ_CP016380.1_557785_558301_+	pfam08020, DUF1706, Protein of unknown function (DUF1706)	NA|391aa|down_9|NZ_CP016380.1_558645_559818_+	TIGR02871, conserved_hypothetical_protein, sporulation integral membrane protein YlbJ
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	3	786967-787072	3	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	CTAAACGCCAAGGTTTGATCCGAATGAAATCTGT	34	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA	NA|519aa|up_9|NZ_CP016380.1_778967_780524_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|379aa|up_8|NZ_CP016380.1_780536_781673_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II	NA|39aa|up_7|NZ_CP016380.1_781687_781804_+	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown]	NA|82aa|up_6|NZ_CP016380.1_781856_782102_+	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE)	NA|136aa|up_5|NZ_CP016380.1_782207_782615_+	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase	NA|230aa|up_4|NZ_CP016380.1_782604_783294_+	TIGR02796, Protein_TolQ, TolQ protein	NA|149aa|up_3|NZ_CP016380.1_783293_783740_+	TIGR02801, Protein_TolR, TolR protein	NA|388aa|up_2|NZ_CP016380.1_783745_784909_+	pfam06519, TolA, TolA C-terminal	NA|442aa|up_1|NZ_CP016380.1_785003_786329_+	PRK04792, tolB, Tol-Pal system protein TolB	NA|175aa|up_0|NZ_CP016380.1_786378_786903_+	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|702aa|down_0|NZ_CP016380.1_789452_791558_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|358aa|down_1|NZ_CP016380.1_791698_792772_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|289aa|down_2|NZ_CP016380.1_792842_793709_-	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like	NA|332aa|down_3|NZ_CP016380.1_793824_794820_-	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase	NA|730aa|down_4|NZ_CP016380.1_795166_797356_+	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional	NA|726aa|down_5|NZ_CP016380.1_797438_799616_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|714aa|down_6|NZ_CP016380.1_799615_801757_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|131aa|down_7|NZ_CP016380.1_801813_802206_+	pfam01641, SelR, SelR domain	NA|384aa|down_8|NZ_CP016380.1_802285_803437_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|148aa|down_9|NZ_CP016380.1_803863_804307_-	cd04678, Nudix_Hydrolase_19, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	4	804282-804395	4	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	CCGACGCGGGGATAGGGAGTAGACATAA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA|72aa|down_6|NZ_CP016380.1_808062_808278_+	NA|270aa|up_9|NZ_CP016380.1_787061_787871_+	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|702aa|up_8|NZ_CP016380.1_789452_791558_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|358aa|up_7|NZ_CP016380.1_791698_792772_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|289aa|up_6|NZ_CP016380.1_792842_793709_-	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like	NA|332aa|up_5|NZ_CP016380.1_793824_794820_-	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase	NA|730aa|up_4|NZ_CP016380.1_795166_797356_+	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional	NA|726aa|up_3|NZ_CP016380.1_797438_799616_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|714aa|up_2|NZ_CP016380.1_799615_801757_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|131aa|up_1|NZ_CP016380.1_801813_802206_+	pfam01641, SelR, SelR domain	NA|384aa|up_0|NZ_CP016380.1_802285_803437_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|335aa|down_0|NZ_CP016380.1_804551_805556_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|149aa|down_1|NZ_CP016380.1_805638_806085_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|142aa|down_2|NZ_CP016380.1_806227_806653_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|76aa|down_3|NZ_CP016380.1_806688_806916_+	COG3017, LolB, Outer membrane lipoprotein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|106aa|down_4|NZ_CP016380.1_807061_807379_+	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|159aa|down_5|NZ_CP016380.1_807468_807945_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|72aa|down_6|NZ_CP016380.1_808062_808278_+	NA	NA|207aa|down_7|NZ_CP016380.1_808253_808874_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|414aa|down_8|NZ_CP016380.1_809040_810282_+	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters	NA|274aa|down_9|NZ_CP016380.1_810631_811453_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	5	878943-879075	5	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	ATAGCTCACGCCTAACCAAATGAAAAACCGTGCTGGCAATTGATC	45	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA|147aa|up_5|NZ_CP016380.1_874036_874477_+,NA	NA|258aa|up_9|NZ_CP016380.1_870784_871558_+	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|384aa|up_8|NZ_CP016380.1_871791_872943_+	COG1775, HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism]	NA|261aa|up_7|NZ_CP016380.1_872952_873735_+	TIGR00241, Uncharacterized_protein_MJ0004, CoA-substrate-specific enzyme activase, putative	NA|87aa|up_6|NZ_CP016380.1_873731_873992_+	pfam11823, DUF3343, Protein of unknown function (DUF3343)	NA|147aa|up_5|NZ_CP016380.1_874036_874477_+	NA	NA|176aa|up_4|NZ_CP016380.1_874478_875006_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|286aa|up_3|NZ_CP016380.1_875070_875928_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|265aa|up_2|NZ_CP016380.1_876113_876908_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|170aa|up_1|NZ_CP016380.1_876904_877414_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|500aa|up_0|NZ_CP016380.1_877425_878925_-	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|306aa|down_0|NZ_CP016380.1_879149_880067_-	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase	NA|150aa|down_1|NZ_CP016380.1_880180_880630_-	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|248aa|down_2|NZ_CP016380.1_880749_881493_-	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|176aa|down_3|NZ_CP016380.1_881535_882063_-	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|816aa|down_4|NZ_CP016380.1_882219_884667_+	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional	NA|778aa|down_5|NZ_CP016380.1_884740_887074_+	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|134aa|down_6|NZ_CP016380.1_887116_887518_+	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|107aa|down_7|NZ_CP016380.1_887618_887939_-	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI	NA|172aa|down_8|NZ_CP016380.1_887926_888442_-	PRK10452, PRK10452, multidrug/spermidine efflux SMR transporter subunit MdtJ	NA|294aa|down_9|NZ_CP016380.1_888598_889480_+	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	6	1743972-1744171	1	PILER-CR	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	GACATGCGCTGGCGATGCTTGGTGTAATCCTGCGCTTTGGCTAGAATA	48	1	1	1744102-1744142	NZ_CP016380.1_1743931-1743971	NA	2	2	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA|266aa|up_6|NZ_CP016380.1_1737387_1738185_+,NA|121aa|down_9|NZ_CP016380.1_1754408_1754771_+	NA|359aa|up_9|NZ_CP016380.1_1734310_1735387_+	TIGR02142, Molybdenum_import_ATP-binding_protein_ModC, molybdenum ABC transporter, ATP-binding protein	NA|259aa|up_8|NZ_CP016380.1_1735451_1736228_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|342aa|up_7|NZ_CP016380.1_1736348_1737374_+	pfam06406, StbA, StbA protein	NA|266aa|up_6|NZ_CP016380.1_1737387_1738185_+	NA	NA|98aa|up_5|NZ_CP016380.1_1738218_1738512_+	pfam06291, Lambda_Bor, Bor protein	NA|97aa|up_4|NZ_CP016380.1_1738686_1738977_+	pfam06291, Lambda_Bor, Bor protein	NA|503aa|up_3|NZ_CP016380.1_1739049_1740558_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|165aa|up_2|NZ_CP016380.1_1740681_1741176_-	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|173aa|up_1|NZ_CP016380.1_1741169_1741688_-	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|764aa|up_0|NZ_CP016380.1_1741625_1743917_+	PRK11539, PRK11539, ComEC family competence protein; Provisional	NA|590aa|down_0|NZ_CP016380.1_1744201_1745971_+	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA	NA|334aa|down_1|NZ_CP016380.1_1745970_1746972_+	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed	NA|63aa|down_2|NZ_CP016380.1_1747094_1747283_+	PRK11827, PRK11827, protein YcaR	NA|254aa|down_3|NZ_CP016380.1_1747279_1748041_+	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|215aa|down_4|NZ_CP016380.1_1748253_1748898_+	PRK09483, PRK09483, response regulator; Provisional	NA|617aa|down_5|NZ_CP016380.1_1749086_1750937_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|185aa|down_6|NZ_CP016380.1_1751232_1751787_+	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|111aa|down_7|NZ_CP016380.1_1752439_1752772_+	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system	NA|95aa|down_8|NZ_CP016380.1_1752773_1753058_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|121aa|down_9|NZ_CP016380.1_1754408_1754771_+	NA
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	7	1862864-1862948	6	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	ATGGCGCGAAAGGCCGGATGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA|186aa|up_9|NZ_CP016380.1_1848717_1849275_+,NA|96aa|up_6|NZ_CP016380.1_1852023_1852311_+,NA|125aa|down_0|NZ_CP016380.1_1863460_1863835_-,NA|69aa|down_1|NZ_CP016380.1_1864085_1864292_-	NA|186aa|up_9|NZ_CP016380.1_1848717_1849275_+	NA	NA|235aa|up_8|NZ_CP016380.1_1849331_1850036_+	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|459aa|up_7|NZ_CP016380.1_1850284_1851661_-	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|96aa|up_6|NZ_CP016380.1_1852023_1852311_+	NA	NA|271aa|up_5|NZ_CP016380.1_1852400_1853213_-	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|793aa|up_4|NZ_CP016380.1_1853521_1855900_+	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|326aa|up_3|NZ_CP016380.1_1856199_1857177_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|794aa|up_2|NZ_CP016380.1_1857272_1859654_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|153aa|up_1|NZ_CP016380.1_1860075_1860534_-	pfam18492, ORF_2_N, Open reading frame 2 N-terminal domain	NA|625aa|up_0|NZ_CP016380.1_1860551_1862426_-	cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases	NA|125aa|down_0|NZ_CP016380.1_1863460_1863835_-	NA	NA|69aa|down_1|NZ_CP016380.1_1864085_1864292_-	NA	NA|197aa|down_2|NZ_CP016380.1_1864307_1864898_-	pfam18735, HEPN_RiboL-PSP, RiboL-PSP-HEPN	NA|121aa|down_3|NZ_CP016380.1_1864973_1865336_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|277aa|down_4|NZ_CP016380.1_1865779_1866610_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|241aa|down_5|NZ_CP016380.1_1866681_1867404_-	PRK10699, PRK10699, phosphatidylglycerophosphatase B; Provisional	NA|377aa|down_6|NZ_CP016380.1_1867751_1868882_+	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|339aa|down_7|NZ_CP016380.1_1869023_1870040_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|733aa|down_8|NZ_CP016380.1_1870315_1872514_+	TIGR03505, FimV_core, FimV N-terminal domain	NA|270aa|down_9|NZ_CP016380.1_1872692_1873502_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	8	2050588-2050732	7	CRISPRCasFinder	no	WYL	cas3,WYL,csa3,DEDDh,DinG	Unclear	TCAGGCCACGCTCTGGGTTTCAATCACGGTGTTTTCGTTGCGATG	45	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA|314aa|up_8|NZ_CP016380.1_2040620_2041562_+,NA|122aa|up_7|NZ_CP016380.1_2041640_2042006_-,NA|187aa|up_0|NZ_CP016380.1_2049995_2050556_-,NA|150aa|down_2|NZ_CP016380.1_2056012_2056462_-,NA|1267aa|down_4|NZ_CP016380.1_2057546_2061347_+,NA|513aa|down_5|NZ_CP016380.1_2061561_2063100_-,NA|214aa|down_7|NZ_CP016380.1_2064147_2064789_-,NA|198aa|down_8|NZ_CP016380.1_2065551_2066145_-	NA|461aa|up_9|NZ_CP016380.1_2038613_2039996_-	pfam13191, AAA_16, AAA ATPase domain	NA|314aa|up_8|NZ_CP016380.1_2040620_2041562_+	NA	NA|122aa|up_7|NZ_CP016380.1_2041640_2042006_-	NA	NA|355aa|up_6|NZ_CP016380.1_2042308_2043373_-	COG5621, COG5621, Predicted secreted hydrolase [General function prediction only]	NA|816aa|up_5|NZ_CP016380.1_2043369_2045817_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|227aa|up_4|NZ_CP016380.1_2045838_2046519_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|156aa|up_3|NZ_CP016380.1_2046716_2047184_+	pfam14267, DUF4357, Domain of unknown function (DUF4357)	NA|396aa|up_2|NZ_CP016380.1_2047293_2048481_-	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter	NA|428aa|up_1|NZ_CP016380.1_2048532_2049816_-	pfam09913, DUF2142, Predicted membrane protein (DUF2142)	NA|187aa|up_0|NZ_CP016380.1_2049995_2050556_-	NA	NA|273aa|down_0|NZ_CP016380.1_2052208_2053027_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|994aa|down_1|NZ_CP016380.1_2053026_2056008_-	cd14962, NHL_like_6, Uncharacterized NHL-repeat domain in bacterial proteins	NA|150aa|down_2|NZ_CP016380.1_2056012_2056462_-	NA	NA|162aa|down_3|NZ_CP016380.1_2056579_2057065_-	PRK05208, PRK05208, hypothetical protein; Provisional	NA|1267aa|down_4|NZ_CP016380.1_2057546_2061347_+	NA	NA|513aa|down_5|NZ_CP016380.1_2061561_2063100_-	NA	NA|354aa|down_6|NZ_CP016380.1_2063099_2064161_-	smart00482, POLAc, DNA polymerase A domain	NA|214aa|down_7|NZ_CP016380.1_2064147_2064789_-	NA	NA|198aa|down_8|NZ_CP016380.1_2065551_2066145_-	NA	NA|215aa|down_9|NZ_CP016380.1_2066276_2066921_-	pfam05154, TM2, TM2 domain
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	9	2297303-2297406	8	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	GTTTAATTGGATTCGAACCAACGAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA|60aa|down_8|NZ_CP016380.1_2304808_2304988_-	NA|330aa|up_9|NZ_CP016380.1_2285372_2286362_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|303aa|up_8|NZ_CP016380.1_2286477_2287386_-	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|328aa|up_7|NZ_CP016380.1_2287485_2288469_+	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|330aa|up_6|NZ_CP016380.1_2288736_2289726_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|332aa|up_5|NZ_CP016380.1_2289898_2290894_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|287aa|up_4|NZ_CP016380.1_2291035_2291896_+	COG1718, RIO1, Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]	NA|178aa|up_3|NZ_CP016380.1_2291948_2292482_-	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|413aa|up_2|NZ_CP016380.1_2292481_2293720_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|165aa|up_1|NZ_CP016380.1_2293917_2294412_-	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences	NA|813aa|up_0|NZ_CP016380.1_2294617_2297056_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|460aa|down_0|NZ_CP016380.1_2297914_2299294_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|69aa|down_1|NZ_CP016380.1_2299440_2299647_-	PRK04964, PRK04964, hypothetical protein; Provisional	NA|206aa|down_2|NZ_CP016380.1_2299777_2300395_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|68aa|down_3|NZ_CP016380.1_2300484_2300688_-	pfam14255, Cys_rich_CPXG, Cysteine-rich CPXCG	NA|220aa|down_4|NZ_CP016380.1_2300957_2301617_-	PRK10826, PRK10826, hexitol phosphatase HxpB	NA|393aa|down_5|NZ_CP016380.1_2301744_2302923_-	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase	NA|297aa|down_6|NZ_CP016380.1_2303008_2303899_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|196aa|down_7|NZ_CP016380.1_2304124_2304712_+	PRK00170, PRK00170, azoreductase; Reviewed	NA|60aa|down_8|NZ_CP016380.1_2304808_2304988_-	NA	NA|63aa|down_9|NZ_CP016380.1_2305151_2305340_-	pfam14056, DUF4250, Domain of unknown function (DUF4250)
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	10	3571426-3571544	9	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	ATCTGCCGGCGCTGGGATGCCCACAGCTGACGGCGG	36	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA|75aa|up_3|NZ_CP016380.1_3565851_3566076_-,NA	NA|244aa|up_9|NZ_CP016380.1_3559572_3560304_+	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|318aa|up_8|NZ_CP016380.1_3560350_3561304_+	PRK05246, PRK05246, glutathione synthetase; Provisional	NA|542aa|up_7|NZ_CP016380.1_3561414_3563040_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|185aa|up_6|NZ_CP016380.1_3563158_3563713_+	PRK00228, PRK00228, YqgE/AlgH family protein	NA|141aa|up_5|NZ_CP016380.1_3563759_3564182_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|502aa|up_4|NZ_CP016380.1_3564229_3565735_-	PRK10207, PRK10207, dipeptide/tripeptide permease DtpB	NA|75aa|up_3|NZ_CP016380.1_3565851_3566076_-	NA	NA|383aa|up_2|NZ_CP016380.1_3566249_3567398_-	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional	NA|307aa|up_1|NZ_CP016380.1_3567588_3568509_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|329aa|up_0|NZ_CP016380.1_3568508_3569495_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|481aa|down_0|NZ_CP016380.1_3571613_3573056_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|317aa|down_1|NZ_CP016380.1_3573799_3574750_+	PRK05269, PRK05269, transaldolase B; Provisional	NA|61aa|down_2|NZ_CP016380.1_3574910_3575093_+	pfam12065, DUF3545, Protein of unknown function (DUF3545)	NA|183aa|down_3|NZ_CP016380.1_3575145_3575694_-	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|223aa|down_4|NZ_CP016380.1_3575852_3576521_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|127aa|down_5|NZ_CP016380.1_3577365_3577746_+	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA	NA|427aa|down_6|NZ_CP016380.1_3577877_3579158_-	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|285aa|down_7|NZ_CP016380.1_3579464_3580319_-	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|267aa|down_8|NZ_CP016380.1_3580493_3581294_-	COG2912, COG2912, Uncharacterized conserved protein [Function unknown]	NA|128aa|down_9|NZ_CP016380.1_3581305_3581689_-	pfam04247, SirB, Invasion gene expression up-regulator, SirB
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	11	3811197-3811338	10	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	CATCAAGACCATGATGGCCTGTAAAAAGGTGGGTTTGCCGGT	42	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA	NA|150aa|up_9|NZ_CP016380.1_3801243_3801693_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|152aa|up_8|NZ_CP016380.1_3801729_3802185_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|447aa|up_7|NZ_CP016380.1_3802200_3803541_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|93aa|up_6|NZ_CP016380.1_3803653_3803932_+	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|493aa|up_5|NZ_CP016380.1_3803921_3805400_+	PRK09442, panF, sodium/pantothenate symporter	NA|476aa|up_4|NZ_CP016380.1_3805477_3806905_+	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component	NA|291aa|up_3|NZ_CP016380.1_3806907_3807780_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|339aa|up_2|NZ_CP016380.1_3807880_3808897_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|293aa|up_1|NZ_CP016380.1_3809422_3810301_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|188aa|up_0|NZ_CP016380.1_3810531_3811095_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|183aa|down_0|NZ_CP016380.1_3811662_3812211_-	PRK10828, PRK10828, putative oxidoreductase; Provisional	NA|672aa|down_1|NZ_CP016380.1_3812317_3814333_-	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|615aa|down_2|NZ_CP016380.1_3814643_3816488_+	PRK10949, PRK10949, signal peptide peptidase SppA	NA|186aa|down_3|NZ_CP016380.1_3816546_3817104_-	cd04686, Nudix_Hydrolase_27, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|267aa|down_4|NZ_CP016380.1_3817110_3817911_-	pfam11207, DUF2989, Protein of unknown function (DUF2989)	NA|477aa|down_5|NZ_CP016380.1_3818108_3819539_+	PRK08289, PRK08289, glyceraldehyde-3-phosphate dehydrogenase; Reviewed	NA|98aa|down_6|NZ_CP016380.1_3819579_3819873_+	COG3139, COG3139, Uncharacterized protein conserved in bacteria [Function unknown]	NA|336aa|down_7|NZ_CP016380.1_3820112_3821120_-	PRK09461, ansA, cytoplasmic asparaginase I; Provisional	NA|400aa|down_8|NZ_CP016380.1_3821634_3822834_+	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS)	NA|624aa|down_9|NZ_CP016380.1_3823017_3824889_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]
GCF_001687125.1_ASM168712v1	NZ_CP016380	Aeromonas hydrophila strain AHNIH1 chromosome, complete genome	12	4340098-4340209	11	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,DinG	Orphan	AGCTCGAGCGAATTGACTGCAGGATCGACCGAAGTCACC	39	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,DinG,RT	NA,NA	NA|423aa|up_9|NZ_CP016380.1_4331633_4332902_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|272aa|up_8|NZ_CP016380.1_4333071_4333887_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|252aa|up_7|NZ_CP016380.1_4333947_4334703_-	pfam01203, T2SSN, Type II secretion system (T2SS), protein N	NA|164aa|up_6|NZ_CP016380.1_4334764_4335256_-	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|395aa|up_5|NZ_CP016380.1_4335252_4336437_-	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|338aa|up_4|NZ_CP016380.1_4336556_4337570_-	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|210aa|up_3|NZ_CP016380.1_4337759_4338389_-	TIGR01711, Type_II_secretion_system_protein_J, type II secretion system protein J	NA|120aa|up_2|NZ_CP016380.1_4338457_4338817_-	pfam02501, T2SSI, Type II secretion system (T2SS), protein I	NA|184aa|up_1|NZ_CP016380.1_4338813_4339365_-	TIGR01708, Type_II_secretion_system_protein_H, type II secretion system protein H	NA|144aa|up_0|NZ_CP016380.1_4339528_4339960_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|407aa|down_0|NZ_CP016380.1_4340221_4341442_-	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|502aa|down_1|NZ_CP016380.1_4341443_4342949_-	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|678aa|down_2|NZ_CP016380.1_4342948_4344982_-	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|308aa|down_3|NZ_CP016380.1_4345003_4345927_-	TIGR01713, Type_II_secretion_system_protein_C, type II secretion system protein C	NA|133aa|down_4|NZ_CP016380.1_4346066_4346465_+	PRK10348, PRK10348, ribosome-associated heat shock protein Hsp15; Provisional	NA|295aa|down_5|NZ_CP016380.1_4346573_4347458_+	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|542aa|down_6|NZ_CP016380.1_4347607_4349233_+	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|222aa|down_7|NZ_CP016380.1_4349408_4350074_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|601aa|down_8|NZ_CP016380.1_4350107_4351910_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|132aa|down_9|NZ_CP016380.1_4352022_4352418_+	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter
