The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	0	52774	4115166	tRNA,transposase	Planktothrix_phage(20.0%)	50	NA	NA
WP_010929635.1|837_1659_+	phosphodiesterase	NA	NA	NA	NA	NA
WP_010929634.1|1764_2805_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929633.1|2847_4140_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815927.1|4150_5026_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003815929.1|5022_5823_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931363.1|5898_6915_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815930.1|7197_7515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815933.1|7605_7953_-	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|8240_9923_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010927242.1|9932_10616_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_010929628.1|10677_11307_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010929627.1|11388_12582_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929626.1|13481_14432_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929625.1|14467_15529_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929624.1|15525_16422_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_003807148.1|16479_17028_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_003807146.1|17042_18044_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_010929623.1|18105_18768_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003818417.1|18775_19051_-	YbeD family protein	NA	NA	NA	NA	NA
WP_019248163.1|19126_20071_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003807138.1|20073_21330_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929621.1|21462_22116_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929620.1|22145_22748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807131.1|23680_24520_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_076879533.1|24519_25656_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929618.1|25724_26591_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929617.1|26587_27391_+	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_003807124.1|27415_27571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929616.1|27587_28874_-	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929615.1|28875_29883_-	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_003807115.1|30013_31066_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_003807114.1|31069_31645_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929614.1|31648_32749_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_010929613.1|32756_33845_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929612.1|33868_35128_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_023853419.1|35190_36378_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929610.1|36374_36968_+	sugar transferase	NA	NA	NA	NA	NA
WP_003807104.1|37229_38336_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003807102.1|38332_39037_+	DUF2837 family protein	NA	NA	NA	NA	NA
WP_010929608.1|40384_42259_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_041166334.1|42255_43200_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|43274_44225_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929607.1|44221_45631_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_076879597.1|45829_46579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807805.1|46580_46832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807804.1|46920_47502_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_010929605.1|47533_48154_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010929604.1|48315_50223_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_003816713.1|51415_51730_-	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|51823_52774_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	132529	199692	4115166	tRNA,transposase	Planktothrix_phage(37.5%)	59	NA	NA
WP_010931687.1|132529_133882_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_003816050.1|133998_135585_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931686.1|135604_136579_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931685.1|136575_137496_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931684.1|137522_138524_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.6	8.9e-15
WP_019248556.1|138520_139537_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_019248557.1|139594_140794_+	amidohydrolase	NA	NA	NA	NA	NA
WP_003816037.1|140923_141847_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931682.1|141890_142934_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931681.1|142935_143751_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.4	6.1e-30
WP_010927255.1|143747_144629_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929556.1|144689_146138_-	catalase	NA	A0A2K9L0T1	Tupanvirus	40.8	3.2e-106
WP_153302799.1|146121_146274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|146260_147211_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853477.1|147757_148996_-	CoA transferase	NA	NA	NA	NA	NA
WP_003819309.1|149077_149857_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931679.1|149853_150861_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003808010.1|151034_151721_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853488.1|151801_152563_-	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_010931677.1|152559_153384_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931676.1|153385_154354_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931675.1|154376_155789_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010931674.1|155828_156983_-	CoA transferase	NA	NA	NA	NA	NA
WP_077274100.1|156972_157995_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930363.1|157883_158834_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996063.1|158820_158997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815086.1|159016_159790_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003815084.1|159879_160689_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931673.1|160699_161776_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_010931672.1|165627_166275_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010927126.1|166486_167395_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_003815073.1|167391_168063_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_003815070.1|168381_169398_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815068.1|169517_170708_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815066.1|170709_171810_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815064.1|171864_172605_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_010931671.1|172725_173748_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815061.1|173747_174215_+	membrane protein	NA	NA	NA	NA	NA
WP_010931670.1|174233_175760_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_010931669.1|175746_177204_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_003815055.1|177301_177490_+	DUF3460 family protein	NA	NA	NA	NA	NA
WP_003815053.1|177516_178404_+	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815051.1|178448_179291_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815049.1|179388_179736_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815047.1|179818_180562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820519.1|180802_181642_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_019247320.1|181644_182295_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003815038.1|182327_183089_+	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931666.1|183269_184520_+	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010931665.1|184516_187585_+	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003815032.1|187581_190689_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_023994937.1|190685_192179_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010929577.1|192175_193126_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|193224_194175_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|194273_195224_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815027.1|195324_196287_-	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010931663.1|196279_197146_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_010931662.1|197345_198572_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931661.1|198741_199692_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	316732	377246	4115166	protease,tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|316732_317683_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|319127_320030_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|320007_320637_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|320967_322350_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|322383_323013_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|323061_324669_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|324693_325377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|325458_325935_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|325975_326155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|326141_327092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|328207_328735_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|328826_329642_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|329702_330437_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|330474_332553_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|332802_333075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|333173_334262_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|334265_336170_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_010929670.1|339903_340467_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|340474_340897_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|340924_341344_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|341372_341819_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|341945_342443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|342597_344868_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|344916_346149_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|346247_347198_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|347243_347936_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|347932_348826_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|349220_350321_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|350402_350777_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|350836_353701_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|353845_354586_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|354655_355867_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|355895_356864_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|357477_358428_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|358584_358908_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|359012_360062_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|360058_360883_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|360883_361180_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|361205_361481_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|361537_362182_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|362181_362868_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|362997_363849_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|363899_364625_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|364656_366006_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|366117_367050_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|367507_370303_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|370896_373839_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|373910_374630_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|374668_375217_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|375371_376271_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|376295_377246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	385178	438766	4115166	protease,tRNA,transposase	Bacillus_phage(25.0%)	49	NA	NA
WP_005012067.1|385178_386129_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|386215_387166_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|387162_388113_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302767.1|388099_388273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|388211_389009_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|389958_390369_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|391390_392134_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|392177_393221_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|393391_395494_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|396904_397861_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|397879_398371_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|398367_399723_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|399723_400422_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|400418_401120_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|401372_402422_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|402527_403469_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|403465_405355_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|405441_406080_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|406222_407608_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|407538_408075_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|408226_409618_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|409634_410615_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|410750_411734_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|411798_412698_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|412804_414559_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|414566_415691_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|415704_416685_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|417415_418366_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|418925_419471_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|419554_421174_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|421189_422344_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|422357_422483_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|422479_424231_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|424227_425907_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_085964336.1|425942_426518_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929717.1|427660_427939_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|428982_429933_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077069015.1|429919_430135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|430210_430372_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|430379_430520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|431038_431488_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|431497_432109_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|432267_433122_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|433141_434524_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|434588_435230_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|435369_435828_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|435852_436629_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|436682_437819_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|437815_438766_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	542699	600209	4115166	transposase	Orpheovirus(14.29%)	52	NA	NA
WP_005012067.1|542699_543650_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219862.1|543636_543804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010927231.1|543786_544704_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|544700_544949_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|544945_546151_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|546223_547219_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|547241_548462_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|548458_549103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|550833_551643_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014906040.1|551860_552901_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
WP_023994705.1|552869_553013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486049.1|552999_553983_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|553909_554611_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|554659_555430_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003819219.1|555426_556668_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|556772_558479_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|558475_559372_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|559412_561002_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|561051_562044_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|562112_562712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879611.1|563172_564150_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|564228_565179_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247802.1|565346_566183_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|566179_566839_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|566928_567852_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|567857_568313_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|568309_569413_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_077274092.1|569332_569641_+	GtrA family protein	NA	NA	NA	NA	NA
WP_010927086.1|569600_571220_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|571216_572275_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|572404_572899_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|572991_573969_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|574164_575370_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|575366_576878_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|576893_578207_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|578397_578577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|578986_579721_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|582165_583116_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|583247_583646_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|584056_584527_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|584615_584960_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|585059_586460_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|588248_588767_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|588877_589633_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|589828_591061_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|591053_591839_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|591905_592877_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|592887_593865_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|593990_595163_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|595189_596218_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|596283_597477_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|599258_600209_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	742262	803453	4115166	protease,transposase	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_062826579.1|742262_743213_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|743688_744579_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|744575_745397_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|745595_746087_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|746105_747179_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|747225_748329_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|748404_749025_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|749045_749555_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|749609_749861_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|749924_751058_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|751065_751452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|751448_753968_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|754396_754735_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|754731_755238_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|755299_756100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|756210_757152_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|757245_758781_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|760460_762311_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|762314_763148_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|763147_764089_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003808546.1|764340_765336_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|765453_767742_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|768048_768957_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|769011_769977_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|770051_771713_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023853074.1|771709_772495_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|772644_773595_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|774293_774677_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|774734_775337_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|775354_775756_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|775889_776783_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|776779_777361_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|778155_778890_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|778930_779980_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|780127_780706_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|781092_782070_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|782163_786558_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|786758_787607_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|787765_788578_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|788633_789584_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219861.1|789570_789735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931453.1|789682_790483_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|790544_790928_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|790939_792373_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|792579_792909_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003814191.1|792911_793580_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|793843_794764_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|794810_795023_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|795045_795468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931458.1|795484_796585_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|796681_798199_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|798274_799114_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|799135_800017_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|800098_801193_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|801486_802437_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|802511_803453_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	808771	854968	4115166	tail,tRNA,terminase,transposase	uncultured_Caudovirales_phage(17.39%)	53	NA	NA
WP_003814219.1|808771_809803_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|809843_810083_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|810152_811742_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|811741_812290_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|812370_812943_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|812961_813873_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|813946_814915_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|815037_816111_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|816115_817936_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|818012_818963_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995786.1|818949_819111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446132.1|819051_819387_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|819520_820171_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|820192_821611_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|821680_822436_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|822404_823163_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|823173_824055_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|824071_824779_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|824781_825540_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|825749_827492_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|827484_828009_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|828048_828843_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|829010_830084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|830182_831133_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931452.1|831384_831597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|831662_832274_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931450.1|832753_833074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|833066_833765_-	membrane protein	NA	NA	NA	NA	NA
WP_023853183.1|833779_834001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|834018_834969_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931448.1|835644_836094_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_010931447.1|836080_837358_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|837360_838779_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|838807_839863_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|839868_840111_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|840233_840836_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|841264_842215_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853024.1|842232_842880_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_010931442.1|842889_843141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|843203_843686_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|843687_843888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|843887_844283_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|844279_844678_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|844674_845097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931436.1|845104_845605_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|845859_846378_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|846387_846717_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|846734_847025_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|847050_849663_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|849672_850032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|850099_850633_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|850629_851019_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|851011_854968_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	861134	915064	4115166	tRNA,transposase	Planktothrix_phage(50.0%)	49	NA	NA
WP_003814636.1|861134_862865_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|862917_863346_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|863348_864029_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|864028_864487_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|864523_865498_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|865514_866831_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|866862_867360_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|867446_868136_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|868135_869185_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|869181_869976_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|870144_870495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|870470_871028_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879618.1|871952_872171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|872157_873108_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814416.1|875386_876475_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|876477_877920_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|878024_879170_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|879201_879999_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|880023_881583_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|881579_883952_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|884061_885165_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|885164_885857_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|886000_886702_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|886686_887064_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|887795_888746_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852750.1|888732_888876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814441.1|888905_889778_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|890118_890337_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|890376_891756_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|891797_893195_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|893234_894887_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|894890_895775_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|895774_896716_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|896794_898414_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|898580_899396_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|899463_900033_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|900033_900984_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|901638_902736_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|902769_904035_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|904192_905143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|905386_905977_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|905992_908437_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|908556_909528_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|909659_910184_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|910143_911094_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|911315_913511_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|913583_913991_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077068980.1|913938_914127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|914113_915064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1037653	1178221	4115166	transposase	Bacillus_phage(11.11%)	116	NA	NA
WP_023994644.1|1037653_1038670_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|1038866_1039850_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|1041448_1042837_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|1042867_1043857_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|1043967_1045200_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|1045481_1046282_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|1046304_1048536_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|1049323_1049770_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|1049791_1050538_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|1050681_1051659_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|1052292_1052904_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|1052897_1054115_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|1054255_1055206_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|1055202_1055922_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|1056042_1058202_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|1058292_1058562_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|1058650_1058857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|1058855_1059383_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|1059401_1060181_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|1060348_1061365_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|1061437_1061929_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|1061939_1063655_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|1064818_1065769_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248601.1|1065765_1067616_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|1067996_1068656_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930053.1|1068743_1068896_+	vir-repressed protein	NA	NA	NA	NA	NA
WP_003809770.1|1069004_1069172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|1069183_1069864_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|1070145_1070862_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|1070876_1072178_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|1074322_1077211_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|1077434_1078787_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|1078815_1079337_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|1079333_1080788_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|1080822_1081071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|1081176_1082052_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|1082077_1083133_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|1083145_1083937_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|1083969_1085340_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_023995501.1|1086392_1086530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1086516_1087467_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|1087519_1087741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|1087900_1088113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|1088232_1089351_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|1089447_1089663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|1089856_1090108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|1090220_1091171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|1091167_1091551_-	ferredoxin	NA	NA	NA	NA	NA
WP_010930067.1|1091605_1093423_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|1093569_1094397_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|1094442_1095423_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|1095419_1095632_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|1095628_1096810_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|1096973_1097708_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|1097709_1100322_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|1100457_1102371_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|1102986_1103397_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|1103494_1104580_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|1104678_1105629_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|1105625_1106600_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|1106724_1107636_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|1107912_1108305_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_124740670.1|1108193_1108448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1108434_1109385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|1109414_1109597_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|1110369_1111551_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|1111766_1112444_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_077274086.1|1112440_1113214_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_010930094.1|1113291_1113873_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|1114243_1116925_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|1116924_1118058_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|1118050_1119136_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|1119222_1120122_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|1120118_1121447_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|1121461_1122133_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_003821510.1|1122305_1124036_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|1124037_1124397_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|1124588_1124903_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|1124945_1126166_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|1126162_1127104_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|1127100_1128090_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|1128124_1128709_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1128807_1129758_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|1129838_1130750_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|1130810_1131956_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|1131975_1132890_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930111.1|1133711_1134641_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|1134884_1136711_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|1136793_1137435_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|1137624_1138659_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|1140495_1141560_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|1142357_1143266_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|1144753_1146028_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|1146181_1146562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|1146569_1147442_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|1147747_1148128_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|1148338_1149064_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1149159_1150110_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|1150214_1151264_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1151401_1152418_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1153926_1154499_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1154558_1155290_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1155341_1156259_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1157066_1160246_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1160242_1161625_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1161694_1161946_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_023853098.1|1162091_1162742_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1162892_1165007_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1165082_1165934_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1165930_1166557_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1166553_1168308_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1168600_1171306_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930129.1|1172991_1174782_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1175003_1176179_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1176221_1177172_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929969.1|1177270_1178221_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1189828	1238873	4115166	holin,tRNA,transposase	uncultured_Mediterranean_phage(42.86%)	47	NA	NA
WP_023853531.1|1189828_1190962_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1191054_1191207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1191238_1191787_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1191805_1192291_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1192468_1193407_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1193409_1193727_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1193772_1194717_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1196397_1197048_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1197101_1197437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1197433_1198294_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1198310_1198592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1198665_1198929_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1199172_1200123_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1200421_1201159_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1201594_1201918_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1201952_1202513_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1202633_1203509_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1203521_1204469_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1204570_1204864_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1204890_1206948_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1206962_1207463_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_023995045.1|1207536_1208301_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_010930146.1|1209164_1210217_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1210269_1210659_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1210667_1211300_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1211399_1212416_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1213246_1214254_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1214250_1215894_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_023995116.1|1215890_1216793_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1216918_1217392_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1217381_1218404_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1218400_1219828_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1220765_1221782_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1222114_1223050_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1223099_1224980_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1225046_1225391_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1225535_1226672_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1226668_1227742_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1227899_1229336_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1229426_1230068_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1230403_1231420_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|1231992_1232943_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155121021.1|1232929_1233088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|1235615_1237037_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1237300_1238017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1238101_1238419_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1238459_1238873_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 11
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1247941	1329219	4115166	tRNA,transposase	Planktothrix_phage(16.67%)	60	NA	NA
WP_005013747.1|1247941_1248892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1249260_1250037_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1250081_1250939_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1250960_1251977_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1252111_1253152_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1253346_1255428_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1255663_1257157_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1257387_1258182_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1258402_1259761_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1259757_1260600_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1260618_1262505_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930175.1|1262742_1263375_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1263393_1263996_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_023995509.1|1263999_1264161_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1264147_1265098_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930177.1|1265900_1266701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812707.1|1266744_1267731_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1267870_1268884_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1268880_1269831_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1269943_1270402_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1270438_1271752_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1271769_1272141_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1272137_1273601_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_003812697.1|1273693_1274470_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_076879621.1|1274451_1277331_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1277513_1278464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1278631_1279456_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1279455_1280334_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1281238_1282354_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930187.1|1282361_1283177_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930188.1|1283173_1285039_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1285117_1285750_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1285746_1286049_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1286091_1287612_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1287618_1288374_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1288403_1289508_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1289610_1291311_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1291292_1292270_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1292279_1293560_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1293552_1294248_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1294281_1295109_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1295390_1298621_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930195.1|1298889_1299066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930196.1|1299356_1303283_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1305182_1306979_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1306978_1307947_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1308016_1308862_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1308929_1309484_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1309530_1310481_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1310579_1311212_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1311376_1313659_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1313813_1316510_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1316635_1317124_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1319534_1322405_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1322450_1323665_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1323894_1325322_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_019248962.1|1325362_1326511_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1326523_1327282_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1327369_1328272_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1328268_1329219_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1532278	1598777	4115166	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_010930208.1|1532278_1533229_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1533294_1533474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930309.1|1533590_1534313_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1534332_1535478_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1536385_1537336_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811370.1|1537523_1538726_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_003811372.1|1538722_1539481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811375.1|1539874_1540507_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930311.1|1541461_1544062_+	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_010930312.1|1544049_1547469_-	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930313.1|1547476_1548382_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811381.1|1548520_1549099_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930314.1|1549095_1550007_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_010930315.1|1550020_1550701_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930316.1|1550902_1552942_+	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_014486069.1|1552960_1553947_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930317.1|1553972_1554770_+	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_003811389.1|1554766_1555960_+	CoA transferase	NA	NA	NA	NA	NA
WP_003811391.1|1555956_1556919_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811393.1|1556936_1557977_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811396.1|1557964_1558573_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930318.1|1560161_1561157_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811400.1|1561176_1562355_+	mandelate racemase	NA	NA	NA	NA	NA
WP_003811401.1|1562365_1563283_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_010930208.1|1563338_1564289_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812022.1|1564387_1565158_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_003812020.1|1565154_1565835_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930319.1|1565901_1566690_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931363.1|1566936_1567953_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930321.1|1568258_1569413_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_003817170.1|1573918_1574401_-	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_003817172.1|1574418_1574709_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_010930322.1|1574835_1575546_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_010930323.1|1575729_1576137_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_003817176.1|1576149_1576569_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930324.1|1576616_1577321_+	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817180.1|1577386_1578808_+	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_003817181.1|1578846_1579611_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_010930325.1|1579654_1580440_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_010930326.1|1580439_1581129_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930327.1|1581131_1582265_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930328.1|1582282_1583305_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930329.1|1583374_1585021_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930330.1|1585054_1586587_+	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930331.1|1586665_1588486_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930332.1|1588606_1590226_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_014486070.1|1590404_1591847_+	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010929632.1|1592063_1593080_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930333.1|1593126_1593915_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_003811859.1|1593937_1594207_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_015041547.1|1594223_1595015_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811855.1|1595026_1595368_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930335.1|1595378_1595879_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811852.1|1595871_1596882_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_003811850.1|1596884_1597457_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_005012067.1|1597826_1598777_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1626948	1665539	4115166	transposase,protease	Emiliania_huxleyi_virus(14.29%)	35	NA	NA
WP_010930352.1|1626948_1628283_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1628335_1630672_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1630797_1631361_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1631369_1632461_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1632532_1632988_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1632988_1633783_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1633779_1634961_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1634947_1635553_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1635549_1636323_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1636334_1637162_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1637323_1639687_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1639754_1640474_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1640597_1641023_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1641057_1642008_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1642125_1643052_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1643117_1644275_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1644255_1644723_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1644870_1645821_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1645837_1646272_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1646261_1646612_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1646808_1647963_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1647959_1649132_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1649179_1650073_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1650118_1650556_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930363.1|1651313_1652264_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1652363_1653314_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003819864.1|1653412_1654396_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_010930365.1|1654658_1655756_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_010930366.1|1655766_1659009_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_003809593.1|1660031_1660676_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930367.1|1660686_1661586_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809599.1|1661633_1662719_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930368.1|1662715_1664410_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_023996304.1|1664443_1664602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1664588_1665539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1844243	1907821	4115166	protease,transposase	Klebsiella_phage(11.11%)	50	NA	NA
WP_005012808.1|1844243_1845194_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122786.1|1845180_1845396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930866.1|1851672_1854420_+	autotransporter Vag8	NA	NA	NA	NA	NA
WP_010930865.1|1854440_1855064_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_003813199.1|1855075_1855546_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_003813196.1|1855557_1855944_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_010930864.1|1856005_1856599_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_010930863.1|1856589_1857501_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_003813189.1|1857516_1858890_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930861.1|1858924_1859656_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010930860.1|1859732_1861331_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.8e-78
WP_010930859.1|1861391_1862747_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_076879554.1|1862781_1864107_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930857.1|1864288_1865221_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_010930856.1|1865231_1866725_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930855.1|1866721_1867645_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930854.1|1867647_1868910_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_047122810.1|1868929_1869943_-	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_077274083.1|1870015_1870339_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930851.1|1870335_1871610_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_023996112.1|1871622_1871766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1871752_1872703_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930850.1|1872699_1874337_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_003813165.1|1874341_1875181_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930849.1|1875177_1876194_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930848.1|1876301_1877876_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930847.1|1878295_1879840_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930846.1|1879944_1881012_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930845.1|1881030_1882617_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_023853651.1|1882613_1883828_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003813149.1|1885376_1885865_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813147.1|1885924_1886782_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930843.1|1886844_1887795_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930842.1|1887857_1888847_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813142.1|1888921_1889803_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930841.1|1890860_1891712_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010930840.1|1891728_1892298_-	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930839.1|1892328_1893192_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930838.1|1893351_1894428_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_029443740.1|1894492_1896190_+	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003820286.1|1896206_1897037_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_010930836.1|1897065_1898088_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1898617_1899568_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|1899666_1900617_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852827.1|1900613_1901936_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_004568205.1|1902036_1902354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809610.1|1902487_1903801_+	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_019247142.1|1903831_1905469_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809615.1|1906092_1906569_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_010931070.1|1906870_1907821_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	1946934	1994951	4115166	tRNA,transposase	Moraxella_phage(18.18%)	43	NA	NA
WP_010930522.1|1946934_1947885_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1947984_1950585_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1950691_1951696_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1951804_1953145_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1953185_1954214_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1954409_1954955_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1954951_1955512_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1955610_1956561_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1956598_1957186_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811011.1|1958947_1960240_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1960374_1961415_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1961512_1962529_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|1962796_1963444_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1963569_1964328_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_077274094.1|1964402_1965092_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
WP_003811022.1|1965109_1965994_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1965990_1966770_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1966796_1967474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1967762_1968515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1968633_1970034_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1970057_1970456_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1970631_1970832_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1970970_1971699_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1971832_1973248_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1973251_1974115_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1974127_1974877_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|1975059_1977075_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_029443816.1|1977056_1977605_-	arylesterase	NA	NA	NA	NA	NA
WP_077274081.1|1977681_1978401_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
WP_005012067.1|1978499_1979450_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1979548_1980499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1980647_1980986_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1981043_1981205_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1981236_1981437_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1981702_1984276_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930534.1|1984346_1986920_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1989446_1989935_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1990026_1991178_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1991231_1992053_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1992091_1993321_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1993449_1993890_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_076879558.1|1993834_1994014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1994000_1994951_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2058598	2128022	4115166	protease,tRNA,transposase	Klosneuvirus(22.22%)	59	NA	NA
WP_010929577.1|2058598_2059549_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|2060822_2062040_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|2063096_2063999_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|2064075_2064948_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|2065078_2065447_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|2065504_2066551_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|2066746_2068003_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|2068007_2069345_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|2069494_2070451_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|2070553_2071486_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|2071601_2071922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930580.1|2071923_2072274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|2072321_2073896_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|2073948_2074893_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|2074910_2075741_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|2075733_2077368_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|2077364_2078720_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|2079626_2081204_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|2081207_2082482_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|2082579_2082954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|2084669_2085803_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|2085840_2086446_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|2086442_2087261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|2087332_2089957_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|2089943_2090198_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|2090264_2090846_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|2091149_2091410_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|2091575_2092199_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|2092198_2092972_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|2092968_2094177_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|2094202_2094676_-	RidA family protein	NA	NA	NA	NA	NA
WP_076879566.1|2095797_2096748_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|2096846_2098196_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|2098961_2099717_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|2099809_2102692_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|2103014_2103440_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|2103467_2104616_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|2104612_2105119_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|2105125_2106421_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_010930792.1|2106461_2107766_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2107767_2108406_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|2108408_2109569_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2109595_2110951_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2110954_2112025_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2112163_2112400_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2112487_2113594_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2113559_2114864_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2114882_2115782_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930786.1|2115965_2117123_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930785.1|2117187_2118495_+	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_003810720.1|2118608_2119148_+	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_006218592.1|2119425_2119638_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_010930784.1|2119657_2121688_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_124740709.1|2121713_2121908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816717.1|2122487_2124656_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
WP_003816708.1|2125065_2125365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047122784.1|2125649_2126063_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_005013747.1|2126022_2126973_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2127071_2128022_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2139226	2188625	4115166	transposase	Klosneuvirus(16.67%)	44	NA	NA
WP_005012067.1|2139226_2140177_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2140173_2141448_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_076879572.1|2141545_2142745_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2142741_2143395_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2143391_2144828_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2144815_2145175_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_005012067.1|2146147_2147098_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2148143_2150009_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2150266_2151787_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2151874_2152525_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2153473_2154769_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2154790_2155675_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2155773_2156649_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2156638_2156995_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_076879571.1|2157069_2158101_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2158230_2158410_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2158507_2159032_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2159042_2159879_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2159991_2160363_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2160359_2160911_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2160926_2162618_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2162666_2163347_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2163594_2164059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2164228_2165158_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2165170_2165818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2165891_2167709_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2167792_2168743_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2169396_2170347_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812199.1|2170365_2170713_-	GFA family protein	NA	NA	NA	NA	NA
WP_010930755.1|2170741_2172181_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_010930754.1|2172199_2172595_-	VOC family protein	NA	NA	NA	NA	NA
WP_003812191.1|2172769_2173378_+	peptidase S16	NA	NA	NA	NA	NA
WP_010930753.1|2173390_2174209_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_010930752.1|2174160_2175135_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812183.1|2175164_2176226_-	XdhC family protein	NA	NA	NA	NA	NA
WP_010930751.1|2176222_2178439_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_010930750.1|2178452_2178911_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003812179.1|2179068_2179413_-	exported protein	NA	NA	NA	NA	NA
WP_010930749.1|2179569_2180475_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930748.1|2180561_2181575_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930153.1|2183554_2184571_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019247707.1|2184713_2186066_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_003812172.1|2186240_2186537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2187674_2188625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2200122	2264491	4115166	transposase	Vibrio_phage(20.0%)	52	NA	NA
WP_005013747.1|2200122_2201073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068978.1|2201059_2201251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|2201294_2202245_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|2202343_2203309_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|2203446_2204346_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2206940_2208428_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2208438_2209635_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2209707_2211027_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2211023_2211899_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443721.1|2211929_2213099_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2213095_2213410_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2213431_2214154_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2214153_2214972_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2214976_2215504_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_029443722.1|2215509_2216775_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2217124_2218264_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2218341_2219214_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2220084_2221035_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2220994_2221630_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2221989_2223312_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_015041331.1|2223540_2224452_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
WP_003810356.1|2225876_2226449_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_065474373.1|2226488_2228318_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2228280_2229339_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2229376_2229838_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2229922_2230669_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2232159_2235390_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2235456_2236788_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2237040_2237415_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2237517_2238696_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2238706_2239297_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2239407_2240214_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930719.1|2240239_2241034_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2242034_2243009_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2243167_2243680_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2243836_2244808_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2246552_2247359_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023996008.1|2247355_2248492_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2248607_2249372_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2249485_2250256_-	spermidine synthase	NA	NA	NA	NA	NA
WP_076879569.1|2250340_2251552_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2251600_2251975_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2252075_2253338_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2253334_2254192_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2254364_2255366_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2255817_2256768_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930712.1|2258283_2259483_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2259851_2260088_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2260151_2260319_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2260432_2262328_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_077069014.1|2262491_2263442_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2263540_2264491_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2389959	2481931	4115166	tRNA,transposase	Tupanvirus(14.29%)	60	NA	NA
WP_010929632.1|2389959_2390976_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003810012.1|2391369_2392662_-	aspartate kinase	NA	NA	NA	NA	NA
WP_029443761.1|2392734_2393769_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_023997643.1|2393829_2394780_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810007.1|2394878_2395844_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_003820119.1|2395880_2396525_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_010930630.1|2396544_2398005_-|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9L6B7	Tupanvirus	27.9	2.5e-34
WP_010930629.1|2398244_2398928_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003809999.1|2399056_2399566_+	cyclophilin	NA	NA	NA	NA	NA
WP_019247344.1|2399558_2400335_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_010930627.1|2400542_2401406_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_003809992.1|2401430_2403017_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	42.0	1.9e-35
WP_010930626.1|2403143_2403926_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_010930625.1|2404033_2404810_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930624.1|2405027_2406020_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023853562.1|2406121_2406940_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003809983.1|2406953_2407787_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_010930622.1|2408946_2409978_+	peptidase C45	NA	NA	NA	NA	NA
WP_010930621.1|2409991_2413615_-	5-oxoprolinase	NA	NA	NA	NA	NA
WP_010930620.1|2413693_2414206_-	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_019247163.1|2415380_2416082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930618.1|2416102_2417068_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930617.1|2417081_2417573_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_076879555.1|2419018_2420104_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930615.1|2420110_2420611_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010930614.1|2421928_2423683_-	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA	NA
WP_014486077.1|2423675_2424773_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_010930612.1|2424786_2427408_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_010930611.1|2427470_2428205_-	molecular chaperone FimB	NA	NA	NA	NA	NA
WP_019247159.1|2428454_2428892_-	protein FimA	NA	NA	NA	NA	NA
WP_010930609.1|2440167_2440797_+	virulence factors two-component system response regulator BvgA	NA	NA	NA	NA	NA
WP_014486076.1|2440805_2444522_+	virulence factors two-component system sensor histidine kinase BvgS	NA	A0A1V0SGX0	Hokovirus	32.0	4.2e-33
WP_003816497.1|2444565_2445441_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003816500.1|2445574_2446408_-	putative hydro-lyase	NA	NA	NA	NA	NA
WP_010930606.1|2446426_2447776_-	amidase	NA	NA	NA	NA	NA
WP_005013747.1|2450961_2451912_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2452028_2452748_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2452920_2453907_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2453907_2454390_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2454393_2455677_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2455673_2456612_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2456608_2458318_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2458327_2459575_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2461185_2462475_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2463612_2464386_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2465047_2465791_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2465865_2466606_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2466801_2467638_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2467688_2468459_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2468508_2469561_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2469557_2470184_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_077274084.1|2470180_2471227_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2471393_2472410_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2472508_2473459_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2476199_2477489_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810870.1|2477607_2478078_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2478088_2479297_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2479443_2479908_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2479931_2480882_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2480980_2481931_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2494360	2556901	4115166	tRNA,transposase	Pandoravirus(20.0%)	56	NA	NA
WP_004568494.1|2494360_2494867_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2494859_2495708_-	hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2495805_2496348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2496391_2497342_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2497497_2497824_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2497820_2498105_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2498101_2498581_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2498577_2500206_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2500202_2500547_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2500546_2503480_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2504638_2505589_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2505687_2505984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2506090_2507008_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2507012_2507726_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2507739_2508711_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249653.1|2510430_2510811_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2510814_2512002_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2512440_2513163_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2513456_2514407_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249376.1|2514403_2514832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811538.1|2516233_2517196_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|2517311_2518265_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930501.1|2518274_2519267_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930500.1|2519318_2520074_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930499.1|2520138_2520828_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930498.1|2521049_2522000_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930497.1|2522030_2523227_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930496.1|2523223_2523997_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930495.1|2524064_2525036_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930494.1|2525121_2526066_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930493.1|2526043_2526913_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930492.1|2527156_2527780_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247905.1|2528094_2528394_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023995112.1|2528407_2531482_-	autotransporter SphB2	NA	NA	NA	NA	NA
WP_010930489.1|2531611_2532286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019247865.1|2532278_2534093_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930487.1|2534146_2535094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2535198_2536149_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2536701_2538327_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2538376_2539411_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2539413_2540760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2540756_2542271_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2542261_2543272_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2543745_2544687_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2544695_2545664_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2547203_2548172_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2548349_2549339_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2549385_2550144_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2550333_2551071_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_153302777.1|2551021_2551183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2551169_2552120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2552304_2553087_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2553080_2553782_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2554021_2554624_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154219857.1|2555808_2555964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2555950_2556901_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2596179	2662509	4115166	transposase	Ectocarpus_siliculosus_virus(11.11%)	57	NA	NA
WP_005012067.1|2596179_2597130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2597149_2598055_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2598132_2598831_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2598990_2599935_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811170.1|2599944_2601435_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2601431_2602499_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2602562_2603975_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2604160_2605381_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2605402_2606353_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811159.1|2606451_2607102_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_010930448.1|2607219_2609022_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811152.1|2610673_2611579_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930446.1|2611760_2613137_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811149.1|2613303_2614044_-	ribonuclease PH	NA	NA	NA	NA	NA
WP_003811148.1|2614180_2615107_+	YicC family protein	NA	NA	NA	NA	NA
WP_010930445.1|2615379_2615535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010928840.1|2615547_2615676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926696.1|2615672_2615957_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811138.1|2616015_2617506_-	AMP nucleosidase	NA	NA	NA	NA	NA
WP_003811137.1|2617750_2618350_+	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811135.1|2618354_2619125_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930444.1|2619362_2620076_+	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930443.1|2620072_2620990_+	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811129.1|2621110_2621758_+	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930441.1|2621799_2622003_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930440.1|2622027_2624307_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_003811113.1|2624319_2625048_-	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_003811112.1|2625044_2625704_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_010930439.1|2625772_2626525_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_005012067.1|2626706_2627657_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994753.1|2627643_2627799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446216.1|2628549_2629455_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_010930437.1|2629466_2630594_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_010930436.1|2630682_2631297_-	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930435.1|2631955_2633143_-	cupin	NA	NA	NA	NA	NA
WP_033446228.1|2633139_2635737_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930433.1|2635991_2636207_+	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_010930432.1|2636662_2637217_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930431.1|2637484_2638045_+	membrane protein	NA	NA	NA	NA	NA
WP_023853587.1|2638156_2639461_+	imelysin	NA	NA	NA	NA	NA
WP_019247498.1|2639457_2640969_+	c-type cytochrome	NA	NA	NA	NA	NA
WP_019248041.1|2641074_2642076_+	imelysin family protein	NA	NA	NA	NA	NA
WP_010930428.1|2642056_2643178_+	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2643277_2644228_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010928449.1|2644224_2644851_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_003820094.1|2644916_2645762_+	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010930426.1|2645865_2646465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930425.1|2646461_2647226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2647295_2648246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930424.1|2648344_2648953_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_010930423.1|2649003_2649330_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_023995689.1|2649376_2651602_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930421.1|2652269_2655674_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930420.1|2655686_2658347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930419.1|2658550_2659753_-	MFS transporter	NA	NA	NA	NA	NA
WP_023994932.1|2660439_2661552_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_005012067.1|2661558_2662509_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2690554	2761502	4115166	tRNA,transposase	Salmonella_phage(18.18%)	56	NA	NA
WP_005012067.1|2690554_2691505_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2691603_2692374_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2692370_2693042_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2693038_2693680_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2693692_2694613_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2694773_2695934_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2695975_2696926_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_010930393.1|2697524_2697749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2697913_2699608_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2699729_2699999_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2700114_2700513_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2700523_2701480_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2701616_2702162_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2702182_2704132_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2704519_2705296_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2705301_2705694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2706115_2707066_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2707062_2708160_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2708191_2709142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2710923_2712165_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2712176_2712950_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814011.1|2714024_2714807_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2714895_2716122_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2716847_2718233_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2718251_2718857_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|2724444_2725830_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_010930939.1|2726451_2728308_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2728304_2729105_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2729119_2730313_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2730380_2731355_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2731477_2732701_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2732811_2735016_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2735310_2735970_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2735977_2736184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2736522_2737278_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2737293_2737455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2737548_2738064_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2738336_2738654_+	virulence factor	NA	NA	NA	NA	NA
WP_003814025.1|2738841_2739090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2739368_2740724_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814028.1|2740770_2742150_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2742212_2742845_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2742844_2745205_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2745246_2746206_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2746192_2746879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2746875_2747208_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2747324_2748275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2748373_2749324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814040.1|2749320_2751387_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_003814042.1|2751386_2751659_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_017685545.1|2752353_2752443_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_010930949.1|2752442_2754227_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_010930950.1|2754250_2756416_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_003814050.1|2756426_2757026_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_003814052.1|2759847_2760543_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_005013747.1|2760551_2761502_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2847619	2888284	4115166	tRNA,transposase	Salmonella_phage(33.33%)	44	NA	NA
WP_010929591.1|2847619_2848570_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2848680_2848863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2848962_2849559_-	lipoprotein	NA	NA	NA	NA	NA
WP_003812822.1|2851329_2851740_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2851798_2852140_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2852145_2854563_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2854575_2855598_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2855672_2856032_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2856047_2856245_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2856580_2857531_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996094.1|2857517_2857679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816756.1|2857725_2858175_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2858171_2859122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120812.1|2859108_2859255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|2859232_2860681_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2860795_2861077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153302789.1|2861029_2861194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2861180_2862131_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2862375_2863089_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2863211_2863439_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2863733_2864372_-	DedA family protein	NA	NA	NA	NA	NA
WP_023994671.1|2864444_2865515_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2865511_2866462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2866877_2867402_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2867405_2867675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2867873_2868935_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2869018_2870653_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2870654_2871458_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2871486_2872446_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2872449_2873964_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2874000_2875005_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2875436_2875907_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2875942_2876554_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2876584_2877208_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2877288_2878821_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2878855_2880097_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2880140_2881172_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2881168_2882338_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2882331_2883012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2883173_2884016_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2884178_2885150_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2885321_2886200_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2886222_2887293_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2887333_2888284_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	2943748	3016620	4115166	tRNA,transposase	Moraxella_phage(16.67%)	59	NA	NA
WP_003810909.1|2943748_2944165_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2944275_2944908_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2944936_2945380_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2945401_2946493_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2946547_2947348_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2947483_2948104_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2948243_2948717_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2949857_2950808_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2950804_2958466_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2958706_2962753_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2963065_2963647_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2963643_2964942_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2965021_2966050_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_076879546.1|2965973_2966324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|2966310_2967261_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2967257_2968208_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2968524_2969130_+	fimbrial protein FimX	NA	NA	NA	NA	NA
WP_010931072.1|2969183_2970497_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2970571_2971042_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2971041_2971830_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2971840_2973493_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2973580_2974531_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2975692_2976199_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2976195_2976960_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2976975_2977260_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2977324_2978314_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2978485_2979415_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2979386_2980073_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2980106_2980652_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2980696_2981962_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2981958_2982861_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2984042_2984987_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2985081_2986599_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2986640_2988269_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2988376_2989258_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2992370_2992745_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2992769_2993108_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2993151_2994786_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2994824_2996171_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2996278_2997700_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2997769_2998354_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2998456_2999407_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2999542_3000649_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|3000659_3001757_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|3001901_3003107_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|3003113_3003635_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|3003631_3004123_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|3004119_3004371_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|3004351_3004837_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|3004972_3008434_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_076879578.1|3008430_3009336_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|3009345_3009777_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|3010023_3010527_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_023995849.1|3010538_3012005_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|3012079_3012955_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|3012951_3013959_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|3014426_3014732_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|3014822_3015413_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|3015603_3016620_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	3019764	3086575	4115166	protease,transposase	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_023995489.1|3019764_3020715_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3020813_3021764_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|3021760_3022555_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|3022586_3023291_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|3023365_3024166_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|3024162_3024570_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|3024566_3025208_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_019247695.1|3025200_3027222_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|3028461_3029793_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|3029789_3030740_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|3032446_3032713_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|3033420_3033759_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|3038312_3038915_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|3039011_3040301_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|3040358_3041090_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|3041086_3041890_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|3041886_3042975_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|3042971_3043901_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|3044049_3045195_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|3045216_3046167_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|3046497_3050319_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|3050475_3051144_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|3051148_3052822_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|3052840_3054160_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_023995053.1|3054164_3056516_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_010931115.1|3056535_3058704_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|3058700_3063890_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|3063979_3064294_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|3064521_3064767_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|3064861_3065380_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|3065479_3066685_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|3066800_3068198_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|3068314_3068893_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|3068965_3070357_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|3070524_3071475_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|3071755_3072376_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|3072372_3072786_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|3072782_3073826_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|3073881_3074070_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|3074079_3074844_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|3074934_3075591_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|3075682_3076441_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|3076466_3078068_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|3078268_3079273_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|3079373_3079637_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|3079754_3080531_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|3081121_3082072_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|3084455_3085568_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|3085624_3086575_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	3116961	3156150	4115166	transposase	Planktothrix_phage(50.0%)	38	NA	NA
WP_005012067.1|3116961_3117912_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879632.1|3117898_3118144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|3118032_3118929_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|3121206_3123432_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|3123596_3124685_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|3124641_3125295_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|3125342_3126140_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|3126671_3127622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|3127702_3128851_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|3128907_3129858_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879633.1|3129844_3130063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814535.1|3129956_3130262_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|3130290_3130725_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|3130726_3131971_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|3131967_3132678_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|3132692_3133604_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|3133966_3134371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|3134367_3134826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|3134832_3135741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|3135737_3136604_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|3136590_3137418_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|3137428_3138556_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|3139633_3140872_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|3140913_3142176_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|3142182_3142935_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|3142986_3143172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|3143447_3143912_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|3143943_3144603_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|3144747_3146856_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|3146852_3147803_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|3147906_3148527_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|3148630_3149371_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|3150505_3151630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|3151675_3152044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3152285_3153236_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|3154271_3154814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740747.1|3155006_3155213_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3155199_3156150_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	3541649	3595391	4115166	transposase	Staphylococcus_phage(33.33%)	49	NA	NA
WP_023995489.1|3541649_3542600_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3543004_3543649_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3543673_3544258_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3544358_3544976_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3544978_3546694_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3546690_3546999_-	urease subunit beta	NA	NA	NA	NA	NA
WP_015040527.1|3547015_3547651_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3547677_3547980_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3548080_3548935_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3549122_3549347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3549516_3549789_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3550206_3550614_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3550983_3551778_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3551878_3553114_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3553182_3554199_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_029443830.1|3554195_3555587_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3555583_3556780_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3556776_3558315_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3558311_3559571_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_010929591.1|3561511_3562462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3563229_3564324_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3564316_3565651_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3565604_3566288_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3566313_3567477_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3567473_3568475_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3568474_3569347_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3569343_3570093_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3570089_3570881_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3570877_3572017_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446332.1|3572325_3573078_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3573111_3573894_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3573897_3574287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3575426_3576290_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3576325_3577414_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3577410_3578361_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080501793.1|3578347_3578761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247959.1|3578714_3581693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3582619_3583498_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3585446_3586397_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3586393_3586861_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3586903_3587674_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3587694_3588495_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3588505_3589915_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3590009_3590795_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3591034_3592051_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3592158_3592551_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3592688_3593369_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_010931358.1|3593373_3594372_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3594440_3595391_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	3601544	3660844	4115166	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3601544_3603308_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3603419_3604298_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3604410_3605226_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3605229_3605481_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3605565_3606582_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3606912_3607134_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3609494_3610412_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3610909_3612118_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3612197_3613769_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3613886_3614822_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3615010_3615955_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814281.1|3616023_3616239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814283.1|3616522_3622240_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3622245_3623373_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3623428_3624055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3624326_3625343_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3625438_3626149_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3626145_3627135_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023852728.1|3627266_3628862_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3628864_3629602_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3629757_3630630_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3630898_3632119_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3632115_3632775_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3632846_3633479_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3633508_3634027_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3634037_3635147_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3635193_3636048_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3636049_3636952_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3638174_3639125_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3640881_3641871_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3642046_3642835_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3642831_3643863_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3643881_3644445_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3644500_3646021_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3646284_3646989_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3646996_3647734_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3647839_3648214_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3648256_3649546_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3649542_3650712_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3650708_3651548_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3651607_3652543_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3652555_3653506_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3653604_3654567_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3654598_3654958_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3655082_3655985_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3655986_3657759_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3657793_3658570_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3659893_3660844_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP015759	Bordetella pertussis strain VA-194, complete genome	4115166	3675782	3733855	4115166	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3675782_3676733_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3676861_3677995_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3678038_3678944_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3678946_3680647_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3680643_3681564_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3681571_3682549_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3682607_3683642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3685616_3685853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3685979_3686843_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3686931_3687753_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3687832_3688570_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3688566_3689559_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3689672_3690335_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3690379_3691528_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3693851_3694802_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3695142_3696093_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3696191_3697142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3697438_3697936_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3697978_3699754_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_076879643.1|3699800_3700628_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3700634_3701369_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3702538_3703333_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3703622_3704213_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3704246_3705575_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3705649_3706795_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3706906_3707905_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3707867_3708302_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3709818_3710703_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3710699_3711905_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3711901_3712762_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3712874_3714665_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3714705_3715371_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3715371_3715680_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3715845_3717132_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3718565_3719516_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3721467_3722682_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3722787_3723777_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3723773_3724382_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3724394_3725024_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3725020_3725641_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3725672_3726464_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815179.1|3727306_3727771_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_010929965.1|3727789_3728716_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3728769_3730056_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3730986_3731859_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3731855_3732806_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3732904_3733855_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
