The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	12485	71073	4127222	transposase	uncultured_Mediterranean_phage(20.0%)	45	NA	NA
WP_005012067.1|12485_13436_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|13990_14365_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|14439_15498_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|15521_16472_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929808.1|19353_20523_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_003815953.1|20623_22231_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929810.1|22277_24299_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815955.1|24327_24573_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_004565905.1|24586_25777_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_010929811.1|25972_26938_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929812.1|26960_28100_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929813.1|28311_29274_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929814.1|29397_31422_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929815.1|31618_33862_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_003815964.1|34140_34599_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929816.1|35526_38148_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_010929817.1|38211_40839_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929818.1|40990_42055_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815975.1|42051_42825_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929819.1|42833_43667_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818225.1|43679_44459_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003818226.1|44493_45966_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929821.1|45993_46752_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929822.1|46807_48658_-	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929823.1|48751_49228_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853391.1|49244_50165_-	bestrophin	NA	NA	NA	NA	NA
WP_003818232.1|50271_50772_+	SET domain-containing protein	NA	NA	NA	NA	NA
WP_010929826.1|51145_51838_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_153302770.1|51992_52160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|52146_53097_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931556.1|53093_56867_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010931557.1|57203_59093_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931558.1|59104_59998_+	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_003817654.1|60023_60899_+	thiazole synthase	NA	NA	NA	NA	NA
WP_010931560.1|60895_61747_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817656.1|61808_62489_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_023853185.1|62492_62852_+	outer membrane efflux domain protein	NA	NA	NA	NA	NA
WP_019247190.1|62852_63812_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_003815102.1|63832_64321_-	D-beta-D-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_010931561.1|64602_65619_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003807735.1|65810_66914_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931562.1|67000_67765_+	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_010931563.1|67886_69077_+	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_005012067.1|69073_70024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|70122_71073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	232781	297693	4127222	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|232781_233267_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|233355_233493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|233485_234466_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|234732_235542_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|235581_236262_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|236255_236714_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|236725_237088_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|237170_237854_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|237909_238218_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|238236_238551_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|238547_241022_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|241029_242421_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|242417_242603_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|242581_243283_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|243279_244101_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|244081_245206_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|245198_246218_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_024000452.1|246423_247458_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|247558_248350_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|248432_248807_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|248784_250194_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|250186_251569_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|251903_253508_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077274089.1|253543_254557_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|254567_255494_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|255884_256835_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|257004_258231_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|258430_259297_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|259289_260252_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|260352_261303_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|261401_262352_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|262450_263401_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|263397_264891_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|264887_267995_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|267991_271060_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|271056_272307_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|272487_273249_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|273281_273932_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|273934_274774_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|275014_275758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|275840_276188_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|276285_277128_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|277172_278060_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|278086_278275_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|278372_279830_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|279816_281343_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|281361_281829_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|281828_282851_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|282971_283712_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|283766_284867_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|284868_286059_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|286178_287195_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|287513_288185_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|288181_289090_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|289301_289949_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|293800_294877_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|294887_295697_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|295786_296560_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023996063.1|296579_296756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853639.1|296742_297693_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	333713	403749	4127222	tRNA,transposase	Natrialba_phage(12.5%)	60	NA	NA
WP_010929569.1|333713_335633_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|335629_336322_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|336318_337116_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|337122_337884_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|337927_338845_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_003806883.1|340434_341625_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|341863_342244_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|342253_342787_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|342850_343282_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|343284_343983_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|344225_344750_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|344831_345215_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|345374_349487_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|349486_353731_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|353839_354244_-	lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|354484_355660_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|358065_359172_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|360183_360999_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010929577.1|360995_361946_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|362027_362363_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|362387_362822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|362854_364081_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|364077_364575_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|364782_365691_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|365876_366719_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|366761_368183_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|368338_369289_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|369285_370476_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|370662_371637_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|371638_373777_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|373773_374313_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|374316_375045_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|375031_375925_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|375995_376391_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|376400_376931_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|377059_377359_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|377376_378327_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815267.1|378826_379462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|379433_379670_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|379797_380691_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|381860_383108_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|383104_383719_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|383854_384805_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|384847_386104_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|387335_388070_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|388075_388666_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|388690_389380_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|389376_390138_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|390217_391117_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|391210_392161_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|392961_394188_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|394187_394607_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|394790_395732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|396155_396992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|397186_397768_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|397780_398098_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|398201_399260_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|399294_400566_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|401195_402377_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|402798_403749_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	411347	469821	4127222	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|411347_412298_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|412372_413317_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|413313_415188_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|416535_417240_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|417236_418343_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|418604_419198_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|419194_420382_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|420444_421704_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|421727_422816_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|422823_423924_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|423927_424503_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|424506_425559_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|425689_426697_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|426698_427985_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|428001_428157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|428181_428985_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|428981_429848_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_076879533.1|429916_431053_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|431052_431892_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|432824_433427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|433456_434110_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|434242_435499_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_019248163.1|435501_436446_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|436521_436797_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|436804_437467_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|437528_438530_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|438544_439093_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|439150_440047_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|440043_441105_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|441140_442091_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|442990_444184_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|444265_444895_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|444956_445640_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|445649_447332_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|447619_447967_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|448057_448375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|448657_449674_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|449749_450550_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|450546_451422_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|451432_452725_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|452767_453808_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|453913_454735_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|454835_455786_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|455884_456790_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|456786_457620_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|458456_459467_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|459463_459853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929638.1|460746_462000_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|462090_463791_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|464217_464865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|464863_466303_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|466395_466698_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|466725_467604_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|468870_469821_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	498606	559117	4127222	protease,tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	52	NA	NA
WP_005015810.1|498606_499557_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|501000_501903_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|501880_502510_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|502840_504223_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|504256_504886_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|504934_506542_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|506566_507250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|507331_507808_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|507848_508028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|508014_508965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|510080_510608_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|510699_511515_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|511575_512310_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|512347_514426_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|514675_514948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|515046_516135_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|516138_518043_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|518039_521714_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|521774_522338_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|522345_522768_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|522795_523215_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|523243_523690_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|523816_524314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|524468_526739_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|526787_528020_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|528118_529069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|529114_529807_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|529803_530697_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|531091_532192_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|532273_532648_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|532707_535572_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|535716_536457_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|536526_537738_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|537766_538735_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|539348_540299_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|540455_540779_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|540883_541933_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|541929_542754_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|542754_543051_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|543076_543352_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|543408_544053_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|544052_544739_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|544868_545720_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|545770_546496_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|546527_547877_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|547988_548921_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446321.1|549378_552174_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|552767_555710_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|555781_556501_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|556539_557088_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|557242_558142_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|558166_559117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	567049	621689	4127222	protease,tRNA,transposase	Bacillus_phage(25.0%)	49	NA	NA
WP_005012067.1|567049_568000_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|568086_569037_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|569033_569984_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302767.1|569970_570144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|570082_570880_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|571829_572240_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|573261_574005_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|574048_575092_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|575262_577365_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|578775_579732_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|579750_580242_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|580238_581594_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|581594_582293_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|582289_582991_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|583243_584293_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|584398_585340_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|585336_587226_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|587312_587951_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|588093_589479_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|589409_589946_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|590097_591489_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|591505_592486_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|592621_593605_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|593669_594569_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|594675_596430_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|596437_597562_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|597575_598556_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_065470066.1|599286_600255_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|600336_601287_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|601846_602392_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|602475_604095_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|604110_605265_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|605278_605404_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|605400_607152_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|607148_608828_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_085964336.1|608863_609439_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929717.1|610581_610860_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|611903_612854_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|613133_613295_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|613302_613443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|613961_614411_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|614420_615032_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|615190_616045_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|616064_617447_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|617511_618153_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|618292_618751_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|618775_619552_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|619605_620742_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|620738_621689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	890074	949374	4127222	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|890074_891025_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|892348_893125_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|893159_894932_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|894933_895836_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|895960_896320_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|896351_897314_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|897412_898363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|898375_899311_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|899370_900210_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|900206_901376_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|901372_902662_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|902704_903079_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|903184_903922_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|903929_904634_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|904897_906418_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|906473_907037_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|907055_908087_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|908083_908872_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_023997720.1|909047_910037_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|911793_912744_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|913966_914869_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|914870_915725_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|915771_916881_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|916891_917410_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|917439_918072_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|918143_918803_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|918799_920020_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|920288_921161_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|921316_922054_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852728.1|922056_923652_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|923783_924773_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|924769_925480_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|925575_926592_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|926863_927490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|927545_928673_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|928678_934396_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814281.1|934679_934895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814277.1|934963_935908_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|936096_937032_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|937149_938721_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|938800_940009_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|940506_941424_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|943784_944006_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|944336_945353_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|945437_945689_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|945692_946508_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|946620_947499_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|947610_949374_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 9
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	955529	1009270	4127222	transposase	Salmonella_phage(33.33%)	50	NA	NA
WP_010930179.1|955529_956480_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931358.1|956548_957547_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|957551_958232_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|958369_958762_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|958869_959886_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|960125_960911_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|961005_962415_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|962425_963226_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|963246_964017_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|964059_964527_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|964523_965474_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|967422_968301_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|969227_972206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080501793.1|972159_972573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|972559_973510_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|973506_974595_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|974630_975494_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|976633_977023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|977026_977809_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_033446332.1|977842_978595_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|978903_980043_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|980039_980831_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|980827_981577_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|981573_982446_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|982445_983447_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|983443_984607_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|984632_985316_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|985269_986604_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|986596_987691_+	CoA transferase	NA	NA	NA	NA	NA
WP_153302791.1|988294_988471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929969.1|988457_989408_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|991348_992608_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|992604_994143_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|994139_995336_-	MFS transporter	NA	NA	NA	NA	NA
WP_029443830.1|995332_996724_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|996720_997737_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|997805_999041_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|999141_999936_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|1000305_1000713_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|1001130_1001403_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|1001572_1001797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|1001984_1002839_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|1002939_1003242_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_015040527.1|1003268_1003904_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|1003920_1004229_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|1004225_1005941_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|1005943_1006561_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|1006661_1007246_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|1007270_1007915_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|1008319_1009270_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1058157	1089966	4127222	protease,integrase,tRNA,transposase	Pseudomonas_phage(33.33%)	22	1055456:1055474	1075344:1075362
1055456:1055474	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_029443720.1|1058157_1058805_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|1058801_1059584_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|1059656_1060748_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|1061027_1062155_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|1062496_1063543_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|1063690_1066810_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_010931302.1|1066811_1069763_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|1069778_1070990_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|1070986_1071187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1071173_1072124_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|1072140_1072635_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|1072638_1072896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853401.1|1072920_1074351_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_029443992.1|1074432_1074717_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|1075500_1076451_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
1075344:1075362	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|1076869_1079434_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|1079478_1081332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|1081664_1083236_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1084677_1085628_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|1085713_1086454_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|1086680_1087628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1089015_1089966_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1339919	1433956	4127222	transposase	Bacillus_virus(27.27%)	88	NA	NA
WP_005012067.1|1339919_1340870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1340972_1341635_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1341729_1341900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1342252_1343254_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1343256_1344453_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1344473_1345277_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1345357_1345654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1345684_1346248_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1346288_1347146_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1347153_1347903_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1347924_1348797_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1348825_1349605_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1349638_1350436_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014486092.1|1351887_1353060_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
WP_003808978.1|1353090_1353483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1353476_1354337_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1354340_1355303_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1356079_1356769_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1357629_1358580_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1358929_1359799_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1359869_1360565_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1360554_1361064_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1361060_1362281_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1362228_1363131_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1364017_1365304_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1365342_1366716_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1366754_1367456_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1367754_1368744_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1368844_1369306_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1369321_1369870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1370011_1371487_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1371592_1372684_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1372687_1373470_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1373479_1374268_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1375393_1375828_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1375824_1376835_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1376878_1377805_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1378091_1378460_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1378676_1379627_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1379671_1382098_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1382146_1382839_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1382911_1384111_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1384128_1385034_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1385149_1386079_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1386104_1387451_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1387478_1388228_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1388241_1389024_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1389216_1390167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879583.1|1390228_1391374_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1391850_1392687_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1392756_1393722_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1393718_1394669_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740747.1|1394655_1394862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1395054_1395597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1396632_1397583_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1397824_1398193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1398238_1399363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1400497_1401238_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1401341_1401962_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1402065_1403016_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1403012_1405121_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1405265_1405925_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1405956_1406421_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1406696_1406882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1406933_1407686_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1407692_1408955_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1408996_1410235_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1411312_1412440_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1412450_1413278_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1413264_1414131_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1415497_1415902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1415993_1416944_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446288.1|1417313_1418225_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1418239_1418950_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1418946_1420191_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1420192_1420627_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1420655_1420961_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_076879633.1|1420854_1421073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1421059_1422010_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1422066_1423215_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1423295_1424246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1424777_1425575_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1425622_1426276_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1426232_1427321_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1427485_1429711_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1431988_1432885_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_076879632.1|1432773_1433019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1433005_1433956_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1464342	1535313	4127222	protease,transposase	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|1464342_1465293_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1465349_1466462_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1468845_1469796_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1470386_1471163_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1471280_1471544_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1471644_1472649_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1472849_1474451_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1474476_1475235_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1475326_1475983_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1476073_1476838_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1476847_1477036_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1477091_1478135_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1478131_1478545_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1478541_1479162_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1479442_1480393_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1480560_1481952_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1482024_1482603_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1482719_1484117_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1484232_1485438_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1485537_1486056_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1486150_1486396_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1486623_1486938_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1487027_1492217_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1492213_1494382_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023995053.1|1494401_1496753_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_003820402.1|1496757_1498077_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1498095_1499769_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1499773_1500442_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1500598_1504420_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1504750_1505701_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1505722_1506868_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1507016_1507946_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1507942_1509031_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1509027_1509831_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1509827_1510559_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1510616_1511906_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1512002_1512605_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1517158_1517497_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1518204_1518471_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1520177_1521128_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1521124_1522456_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247695.1|1523695_1525717_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1525709_1526351_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1526347_1526755_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1526751_1527552_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1527626_1528331_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1528362_1529157_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1529153_1530104_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1530202_1531153_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1531251_1531686_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1531768_1534105_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1534296_1535313_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1635533	1692744	4127222	transposase	Klosneuvirus(16.67%)	52	NA	NA
WP_010931070.1|1635533_1636484_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1640230_1640842_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1641064_1642525_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1642621_1644214_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_076879563.1|1644200_1644479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931039.1|1644537_1644825_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1644826_1646167_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1646262_1646952_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1646964_1648395_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1650119_1650941_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1650951_1652523_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1652551_1653529_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1653555_1654359_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1654355_1655150_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1655157_1656393_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1656385_1656820_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1657569_1658520_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1659141_1660869_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1660980_1662339_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_076879564.1|1662459_1662645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1662631_1663582_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1663622_1664693_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1664715_1665594_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1665765_1666737_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1666899_1667742_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1667903_1668584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931024.1|1668577_1669747_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931023.1|1669743_1670775_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1670818_1672060_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1672094_1673627_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1673707_1674331_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1674361_1674973_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1675008_1675479_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1675910_1676915_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1676951_1678466_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1678469_1679429_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1679457_1680261_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1680262_1681897_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1681980_1683042_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1683240_1683510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1683513_1684038_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1684453_1685404_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994671.1|1685400_1686471_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1686543_1687182_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1687476_1687704_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1687826_1688540_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1688784_1689735_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302789.1|1689721_1689886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931009.1|1689838_1690120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1690234_1691683_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_153302788.1|1691666_1691807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1691793_1692744_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1782977	1835130	4127222	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1782977_1783928_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219858.1|1783914_1784082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1784094_1784448_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1784460_1784823_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1784864_1785290_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_057110980.1|1785492_1786749_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1786947_1787928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1788077_1789319_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1789417_1790368_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1790376_1791072_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1793893_1794493_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1794503_1796669_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1796692_1798477_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1798476_1798566_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1799260_1799533_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1799532_1801599_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1801595_1802546_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1802644_1803595_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1803710_1804043_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1804039_1804726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1804712_1805672_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1805713_1808074_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1808073_1808706_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814028.1|1808768_1810148_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1810194_1811550_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814025.1|1811828_1812077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1812264_1812582_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1812854_1813370_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1813463_1813625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1813640_1814396_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1814734_1814941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1814948_1815608_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1815902_1818107_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1818217_1819441_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1819563_1820538_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1820605_1821799_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1821813_1822614_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1822610_1824467_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1824463_1825069_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1825087_1826473_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1827198_1828425_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1828513_1829296_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_010929591.1|1829394_1830345_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1830371_1831145_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1831156_1832398_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1834179_1835130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1879055	1938968	4127222	tRNA,transposase	Streptococcus_virus(12.5%)	55	NA	NA
WP_010930416.1|1879055_1879544_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1879661_1880240_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_003809561.1|1880312_1880714_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153302776.1|1880652_1880826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1880812_1881763_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1881769_1882882_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1883568_1884771_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1884974_1887635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1887647_1891052_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_023995689.1|1891719_1893945_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1893991_1894318_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1894368_1894977_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1895075_1896026_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1896124_1897075_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1897144_1897909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1897905_1898505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820094.1|1898608_1899454_-	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1899519_1900146_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1900142_1901093_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068977.1|1901079_1901268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930428.1|1901191_1902313_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1902293_1903295_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1903400_1904912_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1904908_1906213_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1906324_1906885_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1907152_1907707_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1908162_1908378_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1908632_1911230_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1911226_1912414_+	cupin	NA	NA	NA	NA	NA
WP_019248658.1|1913073_1913688_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1913776_1914904_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1914915_1915821_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_023994753.1|1916571_1916727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1916713_1917664_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1917845_1918598_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1918666_1919326_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1919322_1920051_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1920063_1922343_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1922367_1922571_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_003811129.1|1922612_1923260_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930443.1|1923380_1924298_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1924294_1925008_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1925245_1926016_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1926020_1926620_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1926864_1928355_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1928413_1928698_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010928840.1|1928694_1928823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930445.1|1928835_1928991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1929263_1930190_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1930326_1931067_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1931233_1932610_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1932791_1933697_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1935348_1937151_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1937268_1937919_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1938017_1938968_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	1984140	2039731	4127222	transposase	Brazilian_cedratvirus(25.0%)	49	NA	NA
WP_005013747.1|1984140_1985091_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1985149_1985923_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1985915_1987472_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1987468_1988419_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219857.1|1988405_1988561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810741.1|1989745_1990348_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1990587_1991289_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1991282_1992065_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1992249_1993200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302777.1|1993186_1993348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930483.1|1993298_1994036_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1994225_1994984_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1995030_1996020_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1996197_1997166_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1998705_1999674_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1999682_2000624_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2001097_2002108_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|2002098_2003613_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|2003609_2004956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|2004958_2005993_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|2006042_2007668_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|2008220_2009171_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|2009275_2010223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|2010276_2012091_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|2012083_2012758_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|2012887_2015962_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|2015975_2016275_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|2016589_2017213_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|2017456_2018326_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|2018303_2019248_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930495.1|2019333_2020305_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930496.1|2020372_2021146_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|2021142_2022339_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|2022369_2023320_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|2023541_2024231_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|2024295_2025051_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|2025102_2026095_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|2026104_2027058_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|2027173_2028136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|2029537_2029966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2029962_2030913_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|2031206_2031929_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|2032367_2033555_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|2033558_2033939_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|2035658_2036630_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|2036643_2037357_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|2037361_2038279_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|2038385_2038682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|2038780_2039731_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2359900	2407916	4127222	tRNA,transposase	Moraxella_phage(16.67%)	44	NA	NA
WP_010930522.1|2359900_2360851_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|2360949_2363550_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|2363656_2364661_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|2364769_2366110_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|2366150_2367179_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|2367374_2367920_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|2367916_2368477_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|2368575_2369526_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|2369563_2370151_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|2370168_2370552_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|2371911_2373204_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|2373338_2374379_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|2374476_2375493_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|2375760_2376408_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|2376533_2377292_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_077274094.1|2377366_2378056_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
WP_003811022.1|2378073_2378958_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|2378954_2379734_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|2379760_2380438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|2380726_2381479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|2381597_2382998_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|2383021_2383420_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|2383595_2383796_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|2383934_2384663_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|2384796_2386212_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|2386215_2387079_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|2387091_2387841_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|2388023_2390039_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_029443816.1|2390020_2390569_-	arylesterase	NA	NA	NA	NA	NA
WP_077274081.1|2390645_2391365_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
WP_005012067.1|2391464_2392415_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2392513_2393464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|2393612_2393951_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|2394008_2394170_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|2394201_2394402_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|2394667_2397241_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930534.1|2397311_2399885_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|2402411_2402900_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2402991_2404143_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|2404196_2405018_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2405056_2406286_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|2406414_2406855_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_076879558.1|2406799_2406979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2406965_2407916_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2469478	2528748	4127222	protease,tRNA,transposase	Klosneuvirus(40.0%)	52	NA	NA
WP_005013747.1|2469478_2470429_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2470553_2471363_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_153302779.1|2471418_2471577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|2471563_2472514_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|2473787_2475005_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|2476061_2476964_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|2477040_2477913_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|2478043_2478412_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|2478469_2479516_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|2479711_2480968_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|2480972_2482310_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|2482459_2483416_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|2483518_2484451_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|2484566_2484887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930580.1|2484888_2485239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|2485286_2486861_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|2486913_2487858_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|2487875_2488706_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|2488698_2490333_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|2490329_2491685_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|2492591_2494169_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|2494172_2495447_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|2495544_2495919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|2497634_2498768_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|2498805_2499411_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|2499407_2500226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|2500297_2502922_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|2502908_2503163_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|2503229_2503811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|2504114_2504375_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|2504540_2505164_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|2505163_2505937_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|2505933_2507142_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|2507167_2507641_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|2507714_2508665_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2508763_2509714_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|2509812_2511162_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|2511927_2512683_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|2512775_2515658_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|2515980_2516406_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|2516433_2517582_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|2517578_2518085_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|2518091_2519387_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_010930792.1|2519427_2520732_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2520733_2521372_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_077069010.1|2521374_2522535_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2522561_2523917_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2523920_2524991_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2525129_2525366_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2525453_2526560_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2526525_2527830_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2527848_2528748_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 20
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2538988	2583311	4127222	transposase	Staphylococcus_phage(25.0%)	46	NA	NA
WP_005013747.1|2538988_2539939_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879573.1|2539925_2540126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930782.1|2540138_2541224_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|2541239_2542001_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|2541997_2542921_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|2543019_2543544_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|2543552_2544296_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|2544391_2544631_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|2544644_2544797_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|2544882_2546373_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|2546464_2547403_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|2547399_2547576_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|2547578_2548241_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|2549862_2550006_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|2550002_2550977_-	membrane protein	NA	NA	NA	NA	NA
WP_153302783.1|2551013_2551157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2551143_2552094_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2552090_2553365_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_076879572.1|2553462_2554662_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2554658_2555312_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2555308_2556745_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2556732_2557092_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_005012067.1|2558064_2559015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2559113_2560064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2561109_2562975_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2563232_2564753_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2564840_2565491_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2566439_2567735_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2567756_2568641_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2568739_2569615_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2569604_2569961_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_076879571.1|2570034_2571066_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2571195_2571375_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2571472_2571997_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2572007_2572844_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2572956_2573328_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2573324_2573876_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2573891_2575583_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2575631_2576312_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2576559_2577024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2577193_2578123_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2578135_2578783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2578856_2580674_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2580757_2581708_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|2582212_2582374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|2582360_2583311_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2596517	2657293	4127222	transposase	Erysipelothrix_phage(20.0%)	50	NA	NA
WP_010930153.1|2596517_2597534_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019247707.1|2597676_2599029_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_003812172.1|2599203_2599500_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2599598_2600549_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|2600647_2601598_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2602049_2603051_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2603223_2604081_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2604077_2605340_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2605440_2605815_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_076879569.1|2605863_2607075_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2607159_2607930_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2608043_2608808_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023996008.1|2608923_2610060_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2610056_2610863_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2612607_2613579_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2613735_2614248_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2614406_2615381_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2616381_2617176_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2617201_2618008_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810329.1|2618118_2618709_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2618719_2619898_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2620000_2620375_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2620627_2621959_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2622025_2625256_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2626746_2627493_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2627577_2628039_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2628076_2629135_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2629097_2630927_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2630966_2631539_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_015041331.1|2632963_2633875_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
WP_010930728.1|2634103_2635426_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2635785_2636421_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2636380_2637331_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2638201_2639074_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2639151_2640291_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_029443722.1|2640640_2641906_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2641911_2642439_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2642443_2643262_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2643261_2643984_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2644005_2644320_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_029443721.1|2644316_2645486_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2645516_2646392_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2646388_2647708_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2647780_2648977_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2648987_2650475_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2653069_2653969_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2654106_2655072_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2655170_2656121_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068978.1|2656164_2656356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2656342_2657293_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2856440	2911920	4127222	tRNA,transposase	Planktothrix_phage(40.0%)	51	NA	NA
WP_005012067.1|2856440_2857391_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2857870_2858527_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2858541_2860209_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2860211_2860841_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2861052_2862147_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2862291_2863104_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2863107_2864811_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2864861_2865992_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2866178_2867255_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2867336_2867987_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_023853504.1|2868001_2869435_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2869688_2870507_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2870503_2871208_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2872107_2873223_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2873256_2873631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2873653_2874811_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2874823_2875057_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2875691_2878661_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2878675_2878885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2879036_2879666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029443766.1|2879662_2881780_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_010930372.1|2881776_2882457_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2882453_2883014_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2883020_2884118_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_077274082.1|2884255_2884864_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2884860_2886153_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2886166_2886709_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2886718_2887555_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2887588_2888650_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2888691_2889744_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2889759_2890062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2890203_2891154_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996304.1|2891140_2891299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2891332_2893027_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2893023_2894109_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2894156_2895056_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2895066_2895711_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2896732_2899975_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_010930365.1|2899985_2901083_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_003819864.1|2901345_2902329_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_076879624.1|2902427_2903378_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2903476_2904427_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2904525_2905476_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2905485_2906175_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2906234_2906672_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2906717_2907611_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2907658_2908831_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2908827_2909982_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2910178_2910529_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2910518_2910953_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2910969_2911920_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	2958013	3024513	4127222	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2958013_2958964_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2959333_2959906_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2959908_2960919_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2960911_2961412_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2961422_2961764_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2961775_2962567_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2962583_2962853_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2962875_2963664_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2963710_2964727_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2964943_2966386_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2966564_2968184_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2968304_2970125_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2970203_2971736_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2971769_2973416_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2973485_2974508_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2974525_2975659_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2975661_2976351_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2976350_2977136_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2977179_2977944_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2977982_2979404_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2979469_2980174_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2980221_2980641_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2980653_2981061_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2981244_2981955_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2982081_2982372_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2982389_2982872_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2987377_2988532_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010929632.1|2988837_2989854_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2990100_2990889_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2990955_2991636_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2991632_2992403_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2992501_2993452_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2993507_2994425_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2994435_2995614_-	mandelate racemase	NA	NA	NA	NA	NA
WP_010930318.1|2995633_2996629_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2998217_2998826_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2998813_2999854_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2999871_3000834_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|3000830_3002024_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|3002020_3002818_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|3002843_3003830_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|3003848_3005888_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|3006089_3006770_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|3006783_3007695_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|3007691_3008270_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|3008408_3009314_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|3009321_3012741_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|3012728_3015329_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|3016284_3016917_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|3017310_3018069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|3018065_3019268_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|3019455_3020406_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|3021313_3022459_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930309.1|3022478_3023201_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|3023317_3023497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|3023562_3024513_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3187078	3252662	4127222	tRNA,transposase	Oenococcus_phage(33.33%)	53	NA	NA
WP_023853639.1|3187078_3188029_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|3188127_3189078_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|3189280_3190270_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_010930230.1|3190353_3190707_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|3190784_3191393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|3193066_3193645_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|3193669_3194623_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|3194662_3195580_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|3195701_3196628_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|3196635_3197382_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|3197708_3198650_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_003811651.1|3198725_3198848_-	membrane protein	NA	NA	NA	NA	NA
WP_010930224.1|3198876_3200574_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|3201008_3202430_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|3202583_3203363_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930221.1|3203487_3204360_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|3204471_3205596_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|3205641_3206604_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|3206596_3207451_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|3207558_3207969_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929956.1|3207965_3208916_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|3209014_3209896_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|3209973_3211353_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|3211391_3212237_-	membrane protein	NA	NA	NA	NA	NA
WP_003813580.1|3212252_3212597_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|3212599_3213136_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|3213308_3213884_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|3213986_3214724_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|3214791_3216429_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|3216536_3217292_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|3217279_3218242_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_003813594.1|3218343_3219144_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|3219205_3221281_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|3221445_3223821_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|3223901_3225257_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|3226735_3227458_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|3227512_3228496_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3228625_3229576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|3229572_3230475_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|3230562_3231321_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248962.1|3231333_3232482_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|3232522_3233950_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|3234179_3235394_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|3235439_3238310_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|3240720_3241209_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|3241334_3244031_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|3244185_3246468_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|3246632_3247265_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|3247363_3248314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|3248360_3248915_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|3248982_3249828_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|3249897_3250866_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|3250865_3252662_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3270232	3331257	4127222	holin,tRNA,transposase	Catovirus(20.0%)	50	NA	NA
WP_010930190.1|3270232_3271753_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|3271795_3272098_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|3272094_3272727_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|3272805_3274671_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_010930187.1|3274667_3275483_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930186.1|3275490_3276606_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|3277510_3278389_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|3278388_3279213_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|3279380_3280331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879621.1|3280513_3283393_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003812697.1|3283374_3284151_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|3284243_3285707_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|3285703_3286075_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|3286092_3287406_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|3287442_3287901_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3288013_3288964_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|3288960_3289974_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|3290113_3291100_+	homoserine kinase	NA	NA	NA	NA	NA
WP_010930177.1|3291143_3291944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3292746_3293697_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995509.1|3293683_3293845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809618.1|3293848_3294451_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|3294469_3295102_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930174.1|3295339_3297226_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|3297244_3298087_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|3298083_3299442_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|3299662_3300457_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|3300687_3302181_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|3302416_3304498_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|3304692_3305733_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|3305867_3306884_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|3306905_3307763_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|3307807_3308584_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|3308951_3309902_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|3309928_3310393_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|3311599_3313888_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|3314004_3314877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|3314919_3316074_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|3316108_3316939_-	transglycosylase	NA	NA	NA	NA	NA
WP_023853525.1|3317022_3318567_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|3318609_3318969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|3318970_3319384_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|3319424_3319742_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|3319826_3320543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|3320806_3322228_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_010929632.1|3325372_3326389_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|3326724_3327366_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|3327456_3328893_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3329050_3330124_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3330120_3331257_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
>prophage 26
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3335010	3401038	4127222	tRNA,transposase	Pseudomonas_phage(14.29%)	56	NA	NA
WP_010931363.1|3335010_3336027_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3336964_3338392_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3338388_3339411_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3339400_3339874_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_023995116.1|3339999_3340902_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3340898_3342542_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|3342538_3343546_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|3344376_3345393_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3345492_3346125_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3346133_3346523_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3346575_3347628_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3348491_3350198_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3350271_3350772_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3350786_3352844_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3352870_3353164_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3353265_3354213_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3354225_3355101_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3355221_3355782_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3355816_3356140_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3356575_3357313_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3357611_3358562_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3358805_3359069_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3359142_3359424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3359440_3360301_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3360297_3360633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3360686_3361337_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3363017_3363962_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3364007_3364325_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3364327_3365266_-	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3365443_3365929_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3365947_3366496_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|3366527_3366680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853531.1|3366772_3367906_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443834.1|3367943_3368651_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3368805_3371154_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3371150_3372089_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3372114_3373305_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3373301_3374075_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3374104_3375298_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3375415_3376426_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3376443_3378480_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3378674_3379415_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|3379513_3380464_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3380506_3381682_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3381903_3383694_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3383706_3385368_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3385380_3388086_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3388378_3390133_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3390129_3390756_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3390752_3391604_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3391679_3393794_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_023853098.1|3393944_3394595_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3394740_3394992_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3395061_3396444_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3396440_3399620_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010930208.1|3400087_3401038_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3405317	3467514	4127222	transposase	Bacillus_virus(15.38%)	55	NA	NA
WP_010929632.1|3405317_3406334_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3406471_3407521_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3407625_3408576_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3408671_3409397_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3409607_3409988_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3410293_3411166_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3411173_3411554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3411707_3412982_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3414469_3415378_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3416175_3417240_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_003821528.1|3419076_3420111_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3420300_3420942_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3421024_3422851_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3423094_3424024_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3424023_3424773_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3424844_3425759_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3425778_3426924_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3426984_3427896_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3427976_3428927_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3429025_3429610_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3429644_3430634_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3430630_3431572_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3431568_3432789_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3432831_3433146_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3433337_3433697_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_003821510.1|3433698_3435429_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3435601_3436273_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3436287_3437616_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3437612_3438512_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3438598_3439684_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3439676_3440810_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3440809_3443491_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3443861_3444443_+	OmpA family protein	NA	NA	NA	NA	NA
WP_077274086.1|3444520_3445294_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_010930092.1|3445290_3445968_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3446183_3447365_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3448137_3448320_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3448349_3449300_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740670.1|3449286_3449541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004566317.1|3449429_3449822_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3450098_3451010_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3451134_3452109_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3452105_3453056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3453154_3454240_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3454337_3454748_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3455363_3457277_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3457412_3460025_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3460026_3460761_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3460924_3462106_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3462102_3462315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3462311_3463292_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3463337_3464165_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930067.1|3464311_3466129_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3466183_3466567_+	ferredoxin	NA	NA	NA	NA	NA
WP_010930066.1|3466563_3467514_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3584540	3648641	4127222	transposase	Klosneuvirus(16.67%)	53	NA	NA
WP_041337087.1|3584540_3585491_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3585487_3586507_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3586516_3589225_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3589372_3590029_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_154219863.1|3589988_3590141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3590127_3591078_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930014.1|3591183_3592119_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3592318_3594013_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3594047_3594974_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3595042_3596140_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3596158_3597022_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3597033_3597816_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3597812_3598931_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3598927_3600460_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3600500_3601508_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3601652_3602375_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3602390_3603413_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3603729_3604464_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3604548_3606294_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3606290_3607043_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3607087_3608044_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3608132_3608699_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3608706_3609567_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_010930001.1|3609596_3610340_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
WP_003807497.1|3610356_3611040_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3611877_3612792_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3612856_3613765_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3613855_3615280_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3615281_3616604_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3616600_3618739_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3618816_3623937_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3624037_3624346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3624415_3624973_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3624988_3626470_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3626524_3628378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3628640_3629978_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3630012_3632010_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3632027_3634076_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3634206_3635073_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3635341_3636307_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3636421_3637570_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3637994_3638306_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3638339_3638600_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3638749_3639883_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3639953_3641090_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3641255_3642050_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3642112_3642556_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3642671_3643622_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068980.1|3643608_3643797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020699729.1|3643744_3644152_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3644224_3646420_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3646641_3647592_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3647690_3648641_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP015761	Bordetella pertussis strain VA-190, complete genome	4127222	3653641	3763152	4127222	protease,tail,transposase,tRNA,terminase	uncultured_Caudovirales_phage(13.79%)	115	NA	NA
WP_010929591.1|3653641_3654592_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3654749_3656015_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3656048_3657146_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3657800_3658751_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814459.1|3658751_3659321_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929980.1|3659388_3660204_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929979.1|3660370_3661990_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929978.1|3662068_3663010_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929977.1|3663009_3663894_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010927038.1|3663897_3665550_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929976.1|3665589_3666987_+	amidase family protein	NA	NA	NA	NA	NA
WP_019247242.1|3667028_3668408_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_003814443.1|3668447_3668666_-	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_003814441.1|3669006_3669879_+	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_023852750.1|3669908_3670052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3670038_3670989_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3671087_3672038_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3672769_3673147_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3673131_3673833_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3673976_3674669_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3674668_3675772_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3675881_3678254_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3678250_3679810_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3679834_3680632_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3680663_3681809_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3681913_3683356_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_003814416.1|3683358_3684447_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3686725_3687676_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879618.1|3687662_3687881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|3688805_3689363_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3689338_3689689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3689857_3690652_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3690648_3691698_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3691697_3692387_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3692473_3692971_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3693002_3694319_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3694335_3695310_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3695346_3695805_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3695804_3696485_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3696487_3696916_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3696968_3698699_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3698764_3699337_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3699317_3700004_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3700359_3701031_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010926433.1|3701580_3701862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076879540.1|3701858_3702392_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3702373_3702925_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3702903_3703146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3703150_3703963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3703962_3704226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3704266_3704464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3704444_3704861_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3704865_3708822_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3708814_3709204_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3709200_3709734_-	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3709801_3710161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3710170_3712783_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3712808_3713099_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3713116_3713446_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3713455_3713974_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3714228_3714729_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3714736_3715159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931438.1|3715155_3715554_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3715550_3715946_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3715945_3716146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3716147_3716630_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3716692_3716944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853024.1|3716953_3717601_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_005012808.1|3717618_3718569_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3718997_3719600_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3719722_3719965_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3719970_3721026_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3721054_3722473_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3722475_3723753_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931448.1|3723739_3724189_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_005012067.1|3724864_3725815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3725832_3726054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|3726068_3726767_+	membrane protein	NA	NA	NA	NA	NA
WP_010931450.1|3726759_3727080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|3727559_3728171_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931452.1|3728236_3728449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3728700_3729651_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3729749_3730823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3730990_3731785_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3731824_3732349_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3732341_3734084_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3734293_3735052_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3735054_3735762_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3735778_3736660_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3736670_3737429_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3737397_3738153_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3738222_3739641_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3739662_3740313_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3740446_3740782_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3740870_3741821_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3741897_3743718_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3743722_3744796_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3744918_3745887_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3745960_3746872_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3746890_3747463_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3747543_3748092_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3748091_3749681_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3749750_3749990_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_003814219.1|3750030_3751062_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3751121_3752303_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3752399_3752852_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3752861_3754202_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3754518_3755556_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3755937_3756297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3756380_3757322_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3757396_3758347_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3758640_3759735_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3759816_3760698_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3760719_3761559_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3761634_3763152_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
