assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001685435.2_ASM168543v3	NZ_CP011361	Salimicrobium jeotgali strain MJ3 chromosome, complete genome	1	473234-473312	1	CRISPRCasFinder	no		csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	Orphan	AATCGTTCCCTTCACACCTGTTAAAAG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	NA|49aa|up_6|NZ_CP011361.2_465221_465368_-,NA|206aa|up_3|NZ_CP011361.2_467203_467821_+,NA	NA|274aa|up_9|NZ_CP011361.2_463238_464060_+	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion]	NA|274aa|up_8|NZ_CP011361.2_464124_464946_+	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion]	NA|81aa|up_7|NZ_CP011361.2_464964_465207_+	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|49aa|up_6|NZ_CP011361.2_465221_465368_-	NA	NA|141aa|up_5|NZ_CP011361.2_465479_465902_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|297aa|up_4|NZ_CP011361.2_465952_466843_-	pfam08378, NERD, Nuclease-related domain	NA|206aa|up_3|NZ_CP011361.2_467203_467821_+	NA	NA|379aa|up_2|NZ_CP011361.2_467911_469048_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1022aa|up_1|NZ_CP011361.2_469048_472114_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|112aa|up_0|NZ_CP011361.2_472331_472667_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|528aa|down_0|NZ_CP011361.2_473700_475284_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|222aa|down_1|NZ_CP011361.2_475280_475946_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|339aa|down_2|NZ_CP011361.2_476093_477110_+	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]	NA|153aa|down_3|NZ_CP011361.2_477177_477636_+	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|497aa|down_4|NZ_CP011361.2_477652_479143_+	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|down_5|NZ_CP011361.2_479792_481190_+	pfam13425, O-antigen_lig, O-antigen ligase like membrane protein	NA|366aa|down_6|NZ_CP011361.2_481208_482306_+	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins	NA|158aa|down_7|NZ_CP011361.2_482306_482780_+	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like	NA|160aa|down_8|NZ_CP011361.2_482776_483256_+	COG5017, COG5017, Uncharacterized conserved protein [Function unknown]	NA|295aa|down_9|NZ_CP011361.2_483293_484178_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
GCF_001685435.2_ASM168543v3	NZ_CP011361	Salimicrobium jeotgali strain MJ3 chromosome, complete genome	2	632136-632230	2	CRISPRCasFinder	no	RT	csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	Unclear	GTATTCGATGAACATCCGGGCAAAGG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	NA|57aa|up_3|NZ_CP011361.2_625224_625395_+,NA|62aa|down_0|NZ_CP011361.2_633962_634148_+,NA|55aa|down_3|NZ_CP011361.2_636273_636438_-,NA|93aa|down_4|NZ_CP011361.2_636454_636733_-	NA|466aa|up_9|NZ_CP011361.2_618845_620243_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|463aa|up_8|NZ_CP011361.2_620308_621697_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|292aa|up_7|NZ_CP011361.2_621693_622569_+	pfam00480, ROK, ROK family	NA|170aa|up_6|NZ_CP011361.2_622619_623129_+	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|91aa|up_5|NZ_CP011361.2_623294_623567_+	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|485aa|up_4|NZ_CP011361.2_623563_625018_+	PRK09442, panF, sodium/pantothenate symporter	NA|57aa|up_3|NZ_CP011361.2_625224_625395_+	NA	RT|460aa|up_2|NZ_CP011361.2_625921_627301_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|235aa|up_1|NZ_CP011361.2_627392_628097_-	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|224aa|up_0|NZ_CP011361.2_628222_628894_+	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase	NA|62aa|down_0|NZ_CP011361.2_633962_634148_+	NA	NA|102aa|down_1|NZ_CP011361.2_634164_634470_+	COG4327, COG4327, Predicted membrane protein [Function unknown]	NA|554aa|down_2|NZ_CP011361.2_634482_636144_+	TIGR03648, Na_symport_lg, probable sodium:solute symporter, VC_2705 subfamily	NA|55aa|down_3|NZ_CP011361.2_636273_636438_-	NA	NA|93aa|down_4|NZ_CP011361.2_636454_636733_-	NA	NA|150aa|down_5|NZ_CP011361.2_636771_637221_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|167aa|down_6|NZ_CP011361.2_637379_637880_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|308aa|down_7|NZ_CP011361.2_637903_638827_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|353aa|down_8|NZ_CP011361.2_638819_639878_-	PRK07409, PRK07409, threonine synthase; Validated	NA|433aa|down_9|NZ_CP011361.2_639877_641176_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional
GCF_001685435.2_ASM168543v3	NZ_CP011361	Salimicrobium jeotgali strain MJ3 chromosome, complete genome	3	1674004-1674634	3,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	 Type I-U?,Type I-U,Type I-C	ATTTCAATCCACGCACCCGCGTGGGGTGCGAC,ATTTCAATCCACGCACCCGCGTGGGGTGCGAC,ATTTCAATCCACGCACCCGCGTGGGGTGCGAC,AATTTCAATCCACGCACCCGCGTGGGGTGCGAC	32,32,32,33	0	0	NA	NA	I-C:I-C:I-C:I-C	9,9,6,6	9	TypeI-U?,TypeI-U,TypeI-C	csa3,cas9,DinG,RT,DEDDh,cas3,cas2,cas1,cas4,cas7,cas8c,cas5,WYL,PrimPol	NA|63aa|up_6|NZ_CP011361.2_1666759_1666948_-,NA|125aa|up_2|NZ_CP011361.2_1670439_1670814_+,NA	NA|118aa|up_9|NZ_CP011361.2_1664652_1665006_-	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|124aa|up_8|NZ_CP011361.2_1665008_1665380_-	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|364aa|up_7|NZ_CP011361.2_1665577_1666669_+	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional	NA|63aa|up_6|NZ_CP011361.2_1666759_1666948_-	NA	NA|505aa|up_5|NZ_CP011361.2_1667171_1668686_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|297aa|up_4|NZ_CP011361.2_1668790_1669681_+	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold	NA|177aa|up_3|NZ_CP011361.2_1669909_1670440_+	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|125aa|up_2|NZ_CP011361.2_1670439_1670814_+	NA	NA|715aa|up_1|NZ_CP011361.2_1670865_1673010_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|236aa|up_0|NZ_CP011361.2_1673138_1673846_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	cas2|97aa|down_0|NZ_CP011361.2_1674792_1675083_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|344aa|down_1|NZ_CP011361.2_1675090_1676122_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|220aa|down_2|NZ_CP011361.2_1676118_1676778_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|290aa|down_3|NZ_CP011361.2_1676764_1677634_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|629aa|down_4|NZ_CP011361.2_1677626_1679513_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|235aa|down_5|NZ_CP011361.2_1679527_1680232_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|796aa|down_6|NZ_CP011361.2_1680508_1682896_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|113aa|down_7|NZ_CP011361.2_1683607_1683946_-	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|352aa|down_8|NZ_CP011361.2_1684064_1685120_+	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family	NA|189aa|down_9|NZ_CP011361.2_1685132_1685699_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]
