The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	576796	583271	2693398		Salmonella_phage(16.67%)	8	NA	NA
WP_021339420.1|576796_577861_+	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	40.3	3.4e-57
WP_002508325.1|578341_578593_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002508324.1|578657_579251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002508323.1|579489_580206_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.4	4.7e-50
WP_021339423.1|580198_580624_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	24.4	1.4e-06
WP_021339424.1|580625_581297_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	56.5	5.7e-66
WP_065367340.1|581551_582145_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.6	2.6e-38
WP_065367341.1|582128_583271_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	33.3	5.9e-23
>prophage 2
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	591795	612020	2693398		uncultured_Caudovirales_phage(35.71%)	16	NA	NA
WP_002508312.1|591795_593574_+	DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	37.4	2.0e-78
WP_065367344.1|593864_594830_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	2.8e-26
WP_065367345.1|594826_596341_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_064783084.1|596533_597589_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	27.2	6.1e-22
WP_002508308.1|597859_598408_+	5'-3'-deoxyribonucleotidase	NA	A0A0A0PKY7	Bacillus_phage	37.2	6.5e-28
WP_021339436.1|598609_599557_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	23.9	3.3e-11
WP_064783082.1|599739_601248_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.4	3.8e-70
WP_021339439.1|601505_603020_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	35.6	2.7e-71
WP_002508304.1|603311_603812_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	72.3	5.4e-53
WP_021339440.1|603826_604714_-	DMT family transporter	NA	NA	NA	NA	NA
WP_002512096.1|605424_605823_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	74.2	1.6e-52
WP_065367346.1|605785_607891_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	90.3	0.0e+00
WP_002508300.1|608007_608976_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	90.1	1.9e-171
WP_021339443.1|609305_610274_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	2.0e-136
WP_021339444.1|610263_611223_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	52.0	2.7e-05
WP_021339445.1|611219_612020_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	29.8	1.3e-13
>prophage 3
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	858992	867468	2693398		Synechococcus_phage(33.33%)	9	NA	NA
WP_031265876.1|858992_859475_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	2.9e-19
WP_021338636.1|859461_860595_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_021338637.1|860594_861296_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	40.8	3.4e-45
WP_002508031.1|861298_861559_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_046465174.1|861558_862230_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_046465175.1|862222_864412_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.0	1.7e-135
WP_021338640.1|864390_865878_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.3	3.6e-44
WP_046465176.1|865870_866899_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	40.7	7.6e-62
WP_002508026.1|866901_867468_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.8	3.6e-29
>prophage 4
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	1306138	1314694	2693398		Bacillus_phage(33.33%)	9	NA	NA
WP_002507558.1|1306138_1307518_-	ATP-dependent DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	34.1	1.6e-59
WP_021339221.1|1307504_1308470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002507556.1|1308579_1308828_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	49.3	1.3e-15
WP_002507555.1|1309109_1309655_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_037539570.1|1310079_1311855_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	26.2	1.2e-22
WP_021339222.1|1311838_1312564_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.3	3.2e-46
WP_002507552.1|1312697_1313435_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_031265982.1|1313427_1313970_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	30.2	1.4e-09
WP_002507550.1|1313959_1314694_-	segregation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	23.5	1.2e-08
>prophage 5
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	1443154	1452393	2693398	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_021339119.1|1443154_1443673_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.6	3.0e-30
WP_065367456.1|1443685_1445965_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	2.1e-67
WP_031265961.1|1446284_1448561_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	33.2	2.5e-28
WP_002507416.1|1448924_1449185_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.9	1.6e-05
WP_002507415.1|1449203_1450343_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	2.7e-84
WP_065367457.1|1450363_1451389_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_021339116.1|1451391_1452393_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	9.9e-06
>prophage 6
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	1578251	1585730	2693398	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_002507302.1|1578251_1579511_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	77.9	4.5e-40
WP_002507301.1|1579797_1580109_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.9	1.6e-34
WP_021339042.1|1580127_1582542_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	85.8	0.0e+00
WP_002507299.1|1582939_1584109_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	76.1	2.4e-165
WP_021339041.1|1584219_1585173_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	82.6	2.1e-66
WP_021339040.1|1585169_1585730_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	63.4	8.6e-68
>prophage 7
NZ_CP013980	Staphylococcus equorum strain KM1031, complete genome	2693398	1588881	1612408	2693398		Staphylococcus_phage(95.0%)	26	NA	NA
WP_002507293.1|1588881_1589883_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.3	4.7e-125
WP_002507292.1|1589996_1590455_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	75.7	8.6e-58
WP_021339036.1|1590467_1591649_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	70.5	2.1e-164
WP_002507290.1|1591659_1592292_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	63.8	1.1e-71
WP_021339035.1|1592298_1593342_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	64.1	6.2e-128
WP_021339034.1|1593919_1595389_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	67.3	1.2e-12
WP_021339033.1|1595566_1596493_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002507286.1|1597123_1597975_-	autolysin	NA	A0A1W6JNR1	Staphylococcus_phage	43.3	5.7e-39
WP_002507285.1|1598138_1598363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065367463.1|1598583_1599054_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	47.3	1.2e-27
WP_021339030.1|1599066_1599489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002507281.1|1599499_1599949_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	52.2	5.2e-23
WP_021339029.1|1600075_1600711_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002507279.1|1600907_1601621_-	transaldolase	NA	H8ZNI7	Synechococcus_phage	37.7	5.0e-20
WP_002507278.1|1601904_1602210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021339028.1|1602277_1602643_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	62.8	5.1e-37
WP_021339027.1|1602639_1602996_+	CrcB family protein	NA	NA	NA	NA	NA
WP_002507275.1|1603189_1604026_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.2	2.5e-111
WP_002507274.1|1604219_1605128_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	77.0	1.3e-100
WP_002507273.1|1605223_1606420_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	86.1	7.5e-194
WP_021339026.1|1606808_1608398_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	81.1	6.3e-257
WP_002507271.1|1608451_1609222_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	69.4	2.5e-97
WP_002507270.1|1609229_1609706_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	52.9	1.8e-42
WP_002507269.1|1609768_1610005_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	79.2	1.9e-29
WP_021339023.1|1610001_1611006_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.2	2.9e-90
WP_021339022.1|1611019_1612408_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	63.2	8.7e-170
>prophage 1
NZ_CP013981	Staphylococcus equorum strain KM1031 plasmid unnamed1, complete sequence	45912	26151	33424	45912		Staphylococcus_phage(50.0%)	9	NA	NA
WP_002509693.1|26151_26466_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	60.6	3.6e-31
WP_037579786.1|26468_27758_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	80.4	4.7e-186
WP_002509695.1|27775_28171_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	82.0	2.6e-58
WP_081288862.1|28477_29020_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_065367574.1|29134_30586_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	50.7	1.9e-119
WP_001836859.1|30599_31013_+	universal stress protein	NA	NA	NA	NA	NA
WP_155762606.1|32265_32430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155762607.1|32661_33105_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	28.2	3.3e-06
WP_081288864.1|33193_33424_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	42.4	2.4e-08
