assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001682335.1_ASM168233v1	NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	1	745909-746051	1	CRISPRCasFinder	no	PrimPol	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	Unclear	TAAAAAATCATGTGAAACCAATGATATCAAGGGTTTTGTGAGCTTTCGAGTAAA	54	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	NA,NA|291aa|down_2|NZ_CP016072.1_749427_750300_+,NA|307aa|down_3|NZ_CP016072.1_750274_751195_+,NA|145aa|down_5|NZ_CP016072.1_752745_753180_+	NA|130aa|up_9|NZ_CP016072.1_737395_737785_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|315aa|up_8|NZ_CP016072.1_737860_738805_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|123aa|up_7|NZ_CP016072.1_738821_739190_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|270aa|up_6|NZ_CP016072.1_739669_740479_+	PRK13648, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|289aa|up_5|NZ_CP016072.1_740475_741342_+	PRK13646, cbiO, energy-coupling factor transporter ATPase	NA|268aa|up_4|NZ_CP016072.1_741331_742135_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|268aa|up_3|NZ_CP016072.1_742150_742954_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|146aa|up_2|NZ_CP016072.1_743162_743600_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|133aa|up_1|NZ_CP016072.1_743613_744012_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|479aa|up_0|NZ_CP016072.1_744435_745872_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|30aa|down_0|NZ_CP016072.1_746457_746547_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|182aa|down_1|NZ_CP016072.1_748700_749246_-	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|291aa|down_2|NZ_CP016072.1_749427_750300_+	NA	NA|307aa|down_3|NZ_CP016072.1_750274_751195_+	NA	NA|240aa|down_4|NZ_CP016072.1_751560_752280_+	pfam08808, RES, RES domain	NA|145aa|down_5|NZ_CP016072.1_752745_753180_+	NA	NA|179aa|down_6|NZ_CP016072.1_753368_753905_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	PrimPol|945aa|down_7|NZ_CP016072.1_754183_757018_+	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown]	NA|251aa|down_8|NZ_CP016072.1_757174_757927_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|143aa|down_9|NZ_CP016072.1_758131_758560_+	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed
GCF_001682335.1_ASM168233v1	NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	2	1330609-1330758	2	CRISPRCasFinder	no	cas3	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	Unclear	AATGAAGAAGCGTTAAAACAAGCACAACCTAAAACAACAACACAA	45	0	0	NA	NA	NA	1	1	Unclear	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	NA,NA	NA|325aa|up_9|NZ_CP016072.1_1317089_1318064_+	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|83aa|up_8|NZ_CP016072.1_1318237_1318486_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|374aa|up_7|NZ_CP016072.1_1320698_1321820_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|330aa|up_6|NZ_CP016072.1_1321922_1322912_+	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|214aa|up_5|NZ_CP016072.1_1322926_1323568_+	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|378aa|up_4|NZ_CP016072.1_1325572_1326706_+	PRK14280, PRK14280, molecular chaperone DnaJ	NA|311aa|up_3|NZ_CP016072.1_1326709_1327642_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|251aa|up_2|NZ_CP016072.1_1327643_1328396_+	pfam04452, Methyltrans_RNA, RNA methyltransferase	NA|450aa|up_1|NZ_CP016072.1_1328400_1329750_+	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|59aa|up_0|NZ_CP016072.1_1329958_1330135_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|217aa|down_0|NZ_CP016072.1_1331208_1331859_+	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]	NA|332aa|down_1|NZ_CP016072.1_1331877_1332873_+	PRK13665, PRK13665, hypothetical protein; Provisional	NA|205aa|down_2|NZ_CP016072.1_1332886_1333501_+	TIGR00019, Peptide_chain_release_factor_1, peptide chain release factor 1	NA|315aa|down_3|NZ_CP016072.1_1333851_1334796_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|154aa|down_4|NZ_CP016072.1_1334799_1335261_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|116aa|down_5|NZ_CP016072.1_1335260_1335608_+	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes	NA|136aa|down_6|NZ_CP016072.1_1335623_1336031_+	TIGR01354, Cytidine_deaminase, cytidine deaminase, homotetrameric	NA|299aa|down_7|NZ_CP016072.1_1336027_1336924_+	PRK00089, era, GTPase Era; Reviewed	NA|257aa|down_8|NZ_CP016072.1_1336948_1337719_+	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO	NA|465aa|down_9|NZ_CP016072.1_1337934_1339329_-	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional
GCF_001682335.1_ASM168233v1	NZ_CP016072	Staphylococcus pseudintermedius strain NA45 isolate UWMNA45 chromosome, complete genome	3	1646960-1647050	3	CRISPRCasFinder	no	c2c10_CAS-V-U3	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	Type V-U3	ATGTTAATTCGTATAGAACTAAAAC	25	0	0	NA	NA	NA	1	1	TypeV-U3	csa3,RT,WYL,PrimPol,DEDDh,cas3,DinG,c2c10_CAS-V-U3	NA|47aa|up_9|NZ_CP016072.1_1643937_1644078_-,NA|66aa|up_8|NZ_CP016072.1_1644103_1644301_-,NA|72aa|up_7|NZ_CP016072.1_1644620_1644836_-,NA|128aa|up_6|NZ_CP016072.1_1644861_1645245_-,NA|72aa|up_5|NZ_CP016072.1_1645274_1645490_-,NA|76aa|up_4|NZ_CP016072.1_1645520_1645748_-,NA|79aa|up_3|NZ_CP016072.1_1645775_1646012_-,NA|77aa|up_2|NZ_CP016072.1_1646054_1646285_-,NA|78aa|up_1|NZ_CP016072.1_1646318_1646552_-,NA|91aa|up_0|NZ_CP016072.1_1646585_1646858_-,NA|237aa|down_4|NZ_CP016072.1_1649850_1650561_+,NA|90aa|down_5|NZ_CP016072.1_1650612_1650882_-,NA|147aa|down_6|NZ_CP016072.1_1650902_1651343_-,NA|169aa|down_7|NZ_CP016072.1_1651375_1651882_-,NA|162aa|down_8|NZ_CP016072.1_1651924_1652410_-,NA|146aa|down_9|NZ_CP016072.1_1652619_1653057_-	NA|47aa|up_9|NZ_CP016072.1_1643937_1644078_-	NA	NA|66aa|up_8|NZ_CP016072.1_1644103_1644301_-	NA	NA|72aa|up_7|NZ_CP016072.1_1644620_1644836_-	NA	NA|128aa|up_6|NZ_CP016072.1_1644861_1645245_-	NA	NA|72aa|up_5|NZ_CP016072.1_1645274_1645490_-	NA	NA|76aa|up_4|NZ_CP016072.1_1645520_1645748_-	NA	NA|79aa|up_3|NZ_CP016072.1_1645775_1646012_-	NA	NA|77aa|up_2|NZ_CP016072.1_1646054_1646285_-	NA	NA|78aa|up_1|NZ_CP016072.1_1646318_1646552_-	NA	NA|91aa|up_0|NZ_CP016072.1_1646585_1646858_-	NA	c2c10_CAS-V-U3|451aa|down_0|NZ_CP016072.1_1647279_1648632_-	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|131aa|down_1|NZ_CP016072.1_1648809_1649202_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|83aa|down_2|NZ_CP016072.1_1649198_1649447_-	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|90aa|down_3|NZ_CP016072.1_1649560_1649830_+	pfam08863, YolD, YolD-like protein	NA|237aa|down_4|NZ_CP016072.1_1649850_1650561_+	NA	NA|90aa|down_5|NZ_CP016072.1_1650612_1650882_-	NA	NA|147aa|down_6|NZ_CP016072.1_1650902_1651343_-	NA	NA|169aa|down_7|NZ_CP016072.1_1651375_1651882_-	NA	NA|162aa|down_8|NZ_CP016072.1_1651924_1652410_-	NA	NA|146aa|down_9|NZ_CP016072.1_1652619_1653057_-	NA
