The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016351	Vibrio natriegens strain CCUG 16374 chromosome 1, complete sequence	3460038	818482	825136	3460038		Staphylococcus_phage(66.67%)	7	NA	NA
WP_014231006.1|818482_819622_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.7e-62
WP_065296421.1|819639_820890_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	9.5e-99
WP_014231008.1|821006_821456_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_065296422.1|821462_822581_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	37.7	7.5e-47
WP_020333699.1|822598_823252_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.0	3.1e-32
WP_065296423.1|823387_824497_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	9.4e-66
WP_014231012.1|824665_825136_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.0	3.7e-32
>prophage 2
NZ_CP016351	Vibrio natriegens strain CCUG 16374 chromosome 1, complete sequence	3460038	1066332	1135205	3460038	integrase,transposase,protease	Tupanvirus(11.76%)	50	1112346:1112361	1144557:1144572
WP_025506618.1|1066332_1066617_+|transposase	IS3 family transposase	transposase	A9YX41	Burkholderia_phage	29.3	1.8e-05
WP_080258209.1|1066592_1067471_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	59.4	3.0e-83
WP_065296521.1|1068734_1070027_-|integrase	site-specific integrase	integrase	A0A248SL35	Klebsiella_phage	28.2	9.3e-33
WP_065296522.1|1070326_1071118_-	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	NA	NA	NA	NA	NA
WP_065296523.1|1071219_1072317_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081280711.1|1072585_1073806_+	isochorismate synthase	NA	NA	NA	NA	NA
WP_155759710.1|1073802_1075422_+	(2,3-dihydroxybenzoyl)adenylate synthase	NA	A0A2K9KZV5	Tupanvirus	28.1	1.8e-12
WP_065296525.1|1075473_1076352_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_065296526.1|1076385_1080333_+	enterobactin synthase subunit F	NA	A0A2K9KZV5	Tupanvirus	26.5	1.6e-91
WP_065296527.1|1080325_1081270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065296528.1|1081284_1082013_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_065296529.1|1082132_1084094_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	34.7	4.6e-15
WP_065296530.1|1084158_1085472_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_065296531.1|1085666_1086896_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	5.7e-56
WP_014231202.1|1087140_1087803_+	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_065296532.1|1087799_1089167_+	Ktr system potassium transporter B	NA	NA	NA	NA	NA
WP_065296533.1|1089436_1092430_+|protease	M6 family metalloprotease domain-containing protein	protease	NA	NA	NA	NA
WP_065296534.1|1092589_1094059_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	36.2	7.8e-60
WP_065296535.1|1094199_1094925_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.2	3.0e-28
WP_065296536.1|1094914_1096357_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_065296537.1|1096518_1097766_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014231209.1|1097848_1098772_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_065296538.1|1098768_1099626_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_014231211.1|1099631_1100747_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.3	4.0e-24
WP_020336137.1|1101046_1102045_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_065296539.1|1102114_1102804_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_065296540.1|1102807_1104169_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_020336140.1|1104465_1105803_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_065296541.1|1105805_1107614_-	sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.9	8.0e-06
WP_014231219.1|1108138_1109443_+	trigger factor	NA	NA	NA	NA	NA
WP_014231220.1|1109548_1110175_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	61.4	1.1e-63
WP_014231221.1|1110245_1111526_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.6	2.5e-131
WP_020336143.1|1111656_1114008_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.4	8.0e-224
1112346:1112361	attL	TGAGCAAATGAAAGCG	NA	NA	NA	NA
WP_014231223.1|1114199_1114472_+	HU family DNA-binding protein	NA	A3E2K9	Sodalis_phage	58.4	3.8e-21
WP_020336144.1|1114675_1116535_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_020336145.1|1116713_1117007_+	ComEA family DNA-binding protein	NA	NA	NA	NA	NA
WP_020336146.1|1117088_1117640_-	rhombosortase	NA	NA	NA	NA	NA
WP_065296543.1|1117643_1118267_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_065296544.1|1118263_1119586_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
WP_065296545.1|1120294_1121239_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_065296546.1|1121235_1122552_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_065296547.1|1122544_1123009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065296548.1|1123001_1125920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065297636.1|1126108_1128253_+	hypothetical protein	NA	A5LH58	Enterobacteria_phage	33.1	6.0e-101
WP_065296549.1|1128318_1129497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081280763.1|1129614_1130868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065296551.1|1131074_1131803_+	hypothetical protein	NA	Q7M296	Enterobacteria_phage	39.8	7.1e-14
WP_155759711.1|1132053_1132506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065296553.1|1132564_1133833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065296554.1|1133921_1135205_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
1144557:1144572	attR	CGCTTTCATTTGCTCA	NA	NA	NA	NA
>prophage 3
NZ_CP016351	Vibrio natriegens strain CCUG 16374 chromosome 1, complete sequence	3460038	2313728	2338572	3460038	integrase,transposase	Vibrio_phage(39.13%)	38	2312467:2312480	2341781:2341794
2312467:2312480	attL	GGTTTAACTCTTCA	NA	NA	NA	NA
WP_065297112.1|2313728_2314637_-	hypothetical protein	NA	K7XS75	uncultured_Mediterranean_phage	33.8	1.8e-30
WP_065297113.1|2314626_2315073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297114.1|2315072_2315504_-	DUF1320 domain-containing protein	NA	A0A0M3VI88	Ralstonia_phage	40.9	2.6e-19
WP_065297116.1|2316148_2317042_-	hypothetical protein	NA	L7P7Y9	Pseudomonas_phage	49.7	3.7e-73
WP_065297117.1|2317088_2317481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081280736.1|2317481_2318639_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	44.1	1.3e-70
WP_065297118.1|2318692_2319199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297119.1|2319207_2319402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297120.1|2319588_2320047_-	phage virion morphogenesis protein	NA	A0A2H4PAM9	Aphanizomenon_phage	28.9	7.2e-12
WP_065297121.1|2320046_2320244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297122.1|2320253_2321657_-	F protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	47.8	1.3e-64
WP_153645804.1|2321640_2321778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297123.1|2321777_2323358_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	53.8	2.1e-127
WP_155759755.1|2323378_2324896_-	hypothetical protein	NA	M1NVQ0	Vibrio_phage	64.5	2.7e-180
WP_065297125.1|2324919_2325501_-	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	44.2	4.2e-33
WP_155759732.1|2325475_2325643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297126.1|2325658_2325949_-	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	54.3	1.4e-21
WP_081280737.1|2325935_2326262_-	DUF2730 family protein	NA	A0A2I7S9E2	Vibrio_phage	37.2	1.4e-09
WP_065297127.1|2326258_2326477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297128.1|2326473_2326980_-	hypothetical protein	NA	A0A2I7S9B5	Vibrio_phage	42.5	6.5e-22
WP_155759733.1|2326961_2327228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297129.1|2327235_2327682_-	hypothetical protein	NA	M4M9N1	Vibrio_phage	60.0	4.3e-46
WP_081280738.1|2327827_2328250_-	hypothetical protein	NA	A0A0C4UR27	Shigella_phage	39.4	1.9e-19
WP_065297131.1|2328347_2328884_-	hypothetical protein	NA	C7BGG4	Burkholderia_phage	32.1	9.6e-08
WP_065297677.1|2328925_2329537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297132.1|2329677_2330205_-	hypothetical protein	NA	A0A2P9JZH6	Alteromonadaceae_phage	56.0	3.1e-27
WP_065297133.1|2330371_2330947_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	36.8	7.6e-27
WP_065297134.1|2331143_2331590_-	hypothetical protein	NA	M4MHH2	Vibrio_phage	56.1	2.0e-35
WP_065297135.1|2331582_2331777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297136.1|2331837_2332032_-	hypothetical protein	NA	A0A2I7S9A9	Vibrio_phage	37.3	5.5e-06
WP_065297137.1|2332028_2332229_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_065297138.1|2332240_2332855_-	DUF3164 family protein	NA	M4MHH7	Vibrio_phage	66.8	2.8e-72
WP_025636974.1|2332842_2333040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297139.1|2333024_2333297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065297140.1|2333889_2334402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025636970.1|2334412_2335120_-	ATP-binding protein	NA	A0A1B0T6H3	Thiobacimonas_phage	31.7	2.1e-31
WP_081280739.1|2335182_2337438_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	M4T586	Rhodobacter_phage	26.7	2.7e-51
WP_065297142.1|2337849_2338572_+	helix-turn-helix transcriptional regulator	NA	A0SML1	Pseudomonas_virus	36.3	8.9e-33
2341781:2341794	attR	TGAAGAGTTAAACC	NA	NA	NA	NA
>prophage 4
NZ_CP016351	Vibrio natriegens strain CCUG 16374 chromosome 1, complete sequence	3460038	2854709	2871932	3460038	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_065297371.1|2854709_2857292_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	2.3e-78
WP_065297372.1|2857434_2857902_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_014232974.1|2858016_2859063_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	1.4e-111
WP_020333963.1|2859253_2859745_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	46.8	1.4e-26
WP_065297373.1|2859829_2862391_+	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.6	1.6e-31
WP_081280750.1|2863533_2864457_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	36.4	1.8e-06
WP_014232979.1|2864470_2865097_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.7	6.7e-37
WP_014232980.1|2865096_2865873_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	50.6	1.7e-66
WP_020333968.1|2865872_2866916_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_014232982.1|2866958_2867438_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_065297375.1|2867451_2868159_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	26.2	3.1e-06
WP_014232984.1|2868160_2868442_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_014232985.1|2868908_2870210_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	60.3	2.7e-136
WP_020333971.1|2870291_2871932_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.2	6.5e-156
>prophage 1
NZ_CP016352	Vibrio natriegens strain CCUG 16374 chromosome 2, complete sequence	2044646	2009500	2017030	2044646		Escherichia_phage(66.67%)	7	NA	NA
WP_014233919.1|2009500_2010148_-	aldolase	NA	A0A077SK32	Escherichia_phage	62.4	9.0e-69
WP_065298835.1|2010159_2011416_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	57.2	2.1e-130
WP_014233917.1|2011440_2012340_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	67.0	3.1e-99
WP_014233916.1|2012620_2013394_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	46.8	1.7e-53
WP_065298836.1|2013402_2014242_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	24.8	2.2e-11
WP_081280834.1|2014664_2016050_+	guanine deaminase	NA	NA	NA	NA	NA
WP_065298837.1|2016085_2017030_-	carbon-nitrogen hydrolase family protein	NA	M1I5Z5	Acanthocystis_turfacea_Chlorella_virus	27.6	2.9e-07
