assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001680065.1_ASM168006v1	NZ_CP016349	Vibrio natriegens strain CCUG 16373 chromosome 1, complete sequence	1	1069110-1069193	1	CRISPRCasFinder	no	cas5f,cas7f,cas6f,RT	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	Unclear	GTGTTCCGCCGAGTAGGCGGCTAA	24	0	0	NA	NA	NA	1	1	Unclear	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	NA|194aa|up_9|NZ_CP016349.1_1059230_1059812_-,NA|108aa|down_2|NZ_CP016349.1_1073062_1073386_+,NA|305aa|down_3|NZ_CP016349.1_1073419_1074334_+	NA|194aa|up_9|NZ_CP016349.1_1059230_1059812_-	NA	NA|173aa|up_8|NZ_CP016349.1_1060090_1060609_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|199aa|up_7|NZ_CP016349.1_1060605_1061202_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|209aa|up_6|NZ_CP016349.1_1061208_1061835_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|269aa|up_5|NZ_CP016349.1_1062014_1062821_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|257aa|up_4|NZ_CP016349.1_1062957_1063728_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|404aa|up_3|NZ_CP016349.1_1064015_1065227_+	pfam06527, TniQ, TniQ	cas5f|697aa|up_2|NZ_CP016349.1_1065230_1067321_+	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas7f|347aa|up_1|NZ_CP016349.1_1067327_1068368_+	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	cas6f|204aa|up_0|NZ_CP016349.1_1068367_1068979_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|581aa|down_0|NZ_CP016349.1_1069561_1071304_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|473aa|down_1|NZ_CP016349.1_1071300_1072719_+	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD	NA|108aa|down_2|NZ_CP016349.1_1073062_1073386_+	NA	NA|305aa|down_3|NZ_CP016349.1_1073419_1074334_+	NA	NA|111aa|down_4|NZ_CP016349.1_1075121_1075454_+	PRK02237, PRK02237, YnfA family protein	NA|229aa|down_5|NZ_CP016349.1_1076157_1076844_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|138aa|down_6|NZ_CP016349.1_1076840_1077254_-	PRK03113, PRK03113, putative disulfide oxidoreductase; Provisional	NA|242aa|down_7|NZ_CP016349.1_1077271_1077997_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|136aa|down_8|NZ_CP016349.1_1078066_1078474_+	cd04785, HTH_CadR-PbrR-like, Helix-Turn-Helix DNA binding domain of the CadR- and PbrR-like transcription regulators	NA|259aa|down_9|NZ_CP016349.1_1078930_1079707_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain
GCF_001680065.1_ASM168006v1	NZ_CP016349	Vibrio natriegens strain CCUG 16373 chromosome 1, complete sequence	2	1285616-1286012	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas4,cas2,cas1,cas9	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	Type II-A,Type II-C,Type II-B	GTTTCAGTGGCTGACTTGTTGAGATAAGCTGTGGAAC,GTTTCAGTGGCTGACTTGTTGAGATAAGCTGTGGAAC,GTTTCAGTGGCTGACTTGTTGAGATAAGCTGTGGAAC	37,37,37	0	0	NA	NA	NA:NA:NA	5,5,5	5	TypeII-A,TypeII-C,TypeII-B	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	NA|113aa|up_6|NZ_CP016349.1_1280868_1281207_+,NA|246aa|up_5|NZ_CP016349.1_1281439_1282177_+,NA|202aa|up_4|NZ_CP016349.1_1282257_1282863_+,NA|86aa|up_3|NZ_CP016349.1_1282894_1283152_+,NA|78aa|up_2|NZ_CP016349.1_1283207_1283441_+,NA|255aa|up_1|NZ_CP016349.1_1283537_1284302_+,NA|395aa|down_4|NZ_CP016349.1_1293124_1294309_+,NA|69aa|down_5|NZ_CP016349.1_1294502_1294709_-,NA|115aa|down_6|NZ_CP016349.1_1294895_1295240_+	NA|685aa|up_9|NZ_CP016349.1_1273345_1275400_+	pfam03235, DUF262, Protein of unknown function DUF262	NA|1055aa|up_8|NZ_CP016349.1_1275396_1278561_+	TIGR00348, R_protein, type I site-specific deoxyribonuclease, HsdR family	NA|243aa|up_7|NZ_CP016349.1_1278560_1279289_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|113aa|up_6|NZ_CP016349.1_1280868_1281207_+	NA	NA|246aa|up_5|NZ_CP016349.1_1281439_1282177_+	NA	NA|202aa|up_4|NZ_CP016349.1_1282257_1282863_+	NA	NA|86aa|up_3|NZ_CP016349.1_1282894_1283152_+	NA	NA|78aa|up_2|NZ_CP016349.1_1283207_1283441_+	NA	NA|255aa|up_1|NZ_CP016349.1_1283537_1284302_+	NA	NA|338aa|up_0|NZ_CP016349.1_1284434_1285448_+	pfam12835, Integrase_1, Integrase	cas4|194aa|down_0|NZ_CP016349.1_1286131_1286713_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas2|96aa|down_1|NZ_CP016349.1_1286699_1286987_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|328aa|down_2|NZ_CP016349.1_1286995_1287979_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas9|1475aa|down_3|NZ_CP016349.1_1288140_1292565_-	TIGR03031, cas_csx12, CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12	NA|395aa|down_4|NZ_CP016349.1_1293124_1294309_+	NA	NA|69aa|down_5|NZ_CP016349.1_1294502_1294709_-	NA	NA|115aa|down_6|NZ_CP016349.1_1294895_1295240_+	NA	NA|244aa|down_7|NZ_CP016349.1_1295422_1296154_-	cd13631, PBP2_Ct-PDT_like, Catalytic domain of prephenate dehydratase from Chlorobium tepidum and similar proteins, subgroup 2; the type 2 periplasmic binding protein fold	NA|209aa|down_8|NZ_CP016349.1_1296873_1297500_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|797aa|down_9|NZ_CP016349.1_1298741_1301132_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins
GCF_001680065.1_ASM168006v1	NZ_CP016349	Vibrio natriegens strain CCUG 16373 chromosome 1, complete sequence	3	2993950-2994206	2	PILER-CR	no		cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	Orphan	GTGCCTCCTTAGCTCAGTAGGTAGAGCAACGGACTGATAATCCG	44	1	1	2993994-2994032	NZ_CP016349.1_2993618-2993656	NA	2	2	Orphan	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	NA,NA	NA|97aa|up_9|NZ_CP016349.1_2984964_2985255_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|144aa|up_8|NZ_CP016349.1_2985329_2985761_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|201aa|up_7|NZ_CP016349.1_2985894_2986497_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|392aa|up_6|NZ_CP016349.1_2986514_2987690_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|307aa|up_5|NZ_CP016349.1_2987769_2988690_-	PRK00971, PRK00971, glutaminase; Provisional	NA|343aa|up_4|NZ_CP016349.1_2988778_2989807_-	COG1041, COG1041, Predicted DNA modification methylase [DNA replication, recombination, and repair]	NA|240aa|up_3|NZ_CP016349.1_2989818_2990538_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|359aa|up_2|NZ_CP016349.1_2990741_2991818_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|91aa|up_1|NZ_CP016349.1_2991837_2992110_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|381aa|up_0|NZ_CP016349.1_2992202_2993345_+	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC	NA|542aa|down_0|NZ_CP016349.1_2994505_2996131_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|418aa|down_1|NZ_CP016349.1_3004276_3005530_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|225aa|down_2|NZ_CP016349.1_3005831_3006506_+	cd05233, SDR_c, classical (c) SDRs	NA|313aa|down_3|NZ_CP016349.1_3006645_3007584_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|222aa|down_4|NZ_CP016349.1_3008594_3009260_-	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR	NA|423aa|down_5|NZ_CP016349.1_3009438_3010707_+	pfam10011, DUF2254, Predicted membrane protein (DUF2254)	NA|160aa|down_6|NZ_CP016349.1_3010900_3011380_+	pfam06271, RDD, RDD family	NA|357aa|down_7|NZ_CP016349.1_3011410_3012481_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|down_8|NZ_CP016349.1_3012484_3013585_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|503aa|down_9|NZ_CP016349.1_3013785_3015294_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional
GCF_001680065.1_ASM168006v1	NZ_CP016349	Vibrio natriegens strain CCUG 16373 chromosome 1, complete sequence	4	3218433-3218547	3	CRISPRCasFinder	no	DEDDh	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	Unclear	TTGGTTGCGGGGGCCGGATTTGATCCGA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,RT,cas5f,cas7f,cas6f,csx1,cas4,cas2,cas1,cas9,DEDDh	NA,NA	NA|62aa|up_9|NZ_CP016349.1_3207039_3207225_+	COG3242, COG3242, Uncharacterized protein conserved in bacteria [Function unknown]	NA|327aa|up_8|NZ_CP016349.1_3207299_3208280_-	TIGR01932, Protein_HflC, HflC protein	NA|401aa|up_7|NZ_CP016349.1_3208282_3209485_-	PRK10930, PRK10930, FtsH protease activity modulator HflK	NA|430aa|up_6|NZ_CP016349.1_3209530_3210820_-	PRK11058, PRK11058, GTPase HflX; Provisional	NA|88aa|up_5|NZ_CP016349.1_3210858_3211122_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|311aa|up_4|NZ_CP016349.1_3211315_3212248_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|677aa|up_3|NZ_CP016349.1_3212244_3214275_-	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|572aa|up_2|NZ_CP016349.1_3214292_3216008_-	PRK10431, PRK10431, N-acetylmuramoyl-l-alanine amidase II; Provisional	NA|155aa|up_1|NZ_CP016349.1_3216001_3216466_-	PRK10646, PRK10646, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA|376aa|up_0|NZ_CP016349.1_3216779_3217907_+	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	DEDDh|182aa|down_0|NZ_CP016349.1_3219979_3220525_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|355aa|down_1|NZ_CP016349.1_3220654_3221719_+	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	NA|286aa|down_2|NZ_CP016349.1_3221835_3222693_+	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|472aa|down_3|NZ_CP016349.1_3222871_3224287_+	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13)	NA|296aa|down_4|NZ_CP016349.1_3224451_3225339_+	pfam00892, EamA, EamA-like transporter family	NA|511aa|down_5|NZ_CP016349.1_3225410_3226943_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|145aa|down_6|NZ_CP016349.1_3227495_3227930_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|157aa|down_7|NZ_CP016349.1_3228136_3228607_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|346aa|down_8|NZ_CP016349.1_3228817_3229855_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|274aa|down_9|NZ_CP016349.1_3229927_3230749_+	PRK11132, cysE, serine acetyltransferase; Provisional
