The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	36555	48868	1862487		Synechococcus_phage(28.57%)	8	NA	NA
WP_002987703.1|36555_40281_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	1.1e-38
WP_021340854.1|40441_41896_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
WP_011284404.1|41923_42946_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	2.4e-63
WP_002987709.1|43113_43668_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
WP_065244887.1|43851_45399_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	51.8	1.7e-44
WP_002987712.1|45456_46581_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_021340857.1|46833_48099_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002987716.1|48376_48868_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	338032	343906	1862487		Streptococcus_phage(100.0%)	9	NA	NA
WP_002990917.1|338032_338668_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
WP_002985844.1|338685_339561_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.6	2.1e-68
WP_011284534.1|339747_339909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002985838.1|340063_340387_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_002985836.1|340391_341255_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_002985833.1|341281_341674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011284535.1|341720_342350_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_011284536.1|342648_343005_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_021340916.1|343078_343906_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.9	1.7e-128
>prophage 3
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	622088	632692	1862487		Streptococcus_phage(57.14%)	9	NA	NA
WP_030126548.1|622088_624299_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.8	2.5e-267
WP_011284674.1|624406_625570_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	64.9	4.5e-143
WP_002985140.1|625566_626253_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002990262.1|626346_627513_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_002990260.1|627573_627915_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
WP_011284677.1|628136_629489_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.0e-29
WP_002990257.1|629576_630845_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_014407485.1|630874_631315_-	membrane protein	NA	NA	NA	NA	NA
WP_011184383.1|631549_632692_+	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
>prophage 4
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	979608	1035563	1862487	tail,head,integrase,portal,terminase	Streptococcus_phage(44.07%)	73	985930:985989	1032102:1032197
WP_011284836.1|979608_982719_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.7	5.4e-119
WP_002989617.1|982903_983275_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002984437.1|983274_983973_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
WP_002984433.1|983982_984768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002989607.1|984894_985509_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
985930:985989	attL	ACTCCCACCAGCTCCATCAATGCTTACCGTAAGTAATCATAACTTACTAAAACCTTGTTA	NA	NA	NA	NA
WP_002993136.1|986099_986288_-	hypothetical protein	NA	A3F673	Streptococcus_phage	76.3	2.1e-18
WP_011184727.1|986527_987286_+	DNase Mf2	NA	NA	NA	NA	NA
WP_002985327.1|987396_988104_+	streptococcal pyrogenic exotoxin SpeC	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.1	3.9e-09
WP_011284838.1|988179_989514_-	lysin	NA	Q5MY96	Streptococcus_phage	93.0	1.3e-247
WP_011284839.1|989625_989811_-	hypothetical protein	NA	Q938J5	Temperate_phage	96.7	6.6e-25
WP_002990012.1|989807_990104_-	hypothetical protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
WP_011284840.1|990114_990732_-	hypothetical protein	NA	A3F662	Streptococcus_phage	94.6	9.8e-89
WP_002988795.1|990734_990896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284841.1|990909_992805_-	hypothetical protein	NA	Q938J9	Temperate_phage	52.5	5.9e-76
WP_021340983.1|992815_993130_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284843.1|993131_994346_-	hypothetical protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
WP_011284844.1|994342_996397_-	hypothetical protein	NA	A3F656	Streptococcus_phage	84.1	0.0e+00
WP_011284845.1|996393_997173_-	hypothetical protein	NA	A3F655	Streptococcus_phage	54.0	1.9e-65
WP_011284846.1|997204_1000840_-	tape measure protein	NA	C5IUK3	Streptococcus_phage	41.4	1.2e-85
WP_021340179.1|1000854_1001151_-	hypothetical protein	NA	A0A0S2MYH1	Enterococcus_phage	42.2	1.3e-09
WP_002990023.1|1001225_1001579_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	48.6	5.5e-20
WP_030126608.1|1001632_1002256_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	50.5	3.2e-39
WP_011284850.1|1002310_1002700_-	hypothetical protein	NA	B5SP36	Lactococcus_phage	68.2	4.2e-45
WP_030126607.1|1002696_1003062_-	HK97 gp10 family phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	5.9e-17
WP_011284852.1|1003042_1003351_-	hypothetical protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	7.4e-13
WP_002984392.1|1003347_1003701_-	hypothetical protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
WP_011284854.1|1003714_1003957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284855.1|1003966_1005049_-	hypothetical protein	NA	A0A2H4J022	uncultured_Caudovirales_phage	57.1	3.4e-105
WP_011284856.1|1005051_1005432_-|head	head decoration protein	head	A0A0K2CNR0	Brevibacillus_phage	32.5	1.8e-05
WP_023079765.1|1005441_1005975_-	DUF4355 domain-containing protein	NA	A0A141E0S7	Streptococcus_phage	80.7	6.8e-14
WP_011284858.1|1006118_1006385_-	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	70.5	1.9e-25
WP_011284859.1|1006387_1006702_-	hypothetical protein	NA	M1PLI3	Streptococcus_phage	72.8	6.8e-38
WP_002988389.1|1006771_1006957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284860.1|1006960_1008523_-|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	44.2	2.5e-48
WP_002984369.1|1008503_1010006_-|portal	phage portal protein	portal	C9W9H5	Streptococcus_virus	54.5	1.9e-141
WP_020833530.1|1010017_1011325_-|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.7	2.0e-184
WP_044564892.1|1011302_1011770_-|terminase	terminase small subunit	terminase	A0A141E1Y3	Streptococcus_phage	70.8	1.1e-52
WP_001132273.1|1011832_1012018_+	addiction module toxin, HicA family	NA	D6PSW1	Lactobacillus_phage	54.0	1.7e-09
WP_002987543.1|1012069_1012447_+	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	44.0	3.3e-15
WP_002984360.1|1012584_1013046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284864.1|1013064_1013979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284866.1|1014556_1014991_-	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	97.9	6.2e-74
WP_011888686.1|1015439_1015919_-	DUF1642 domain-containing protein	NA	A0A141E0J6	Streptococcus_phage	41.9	6.5e-24
WP_011888685.1|1015923_1016556_-	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.6	5.1e-85
WP_011284869.1|1016557_1016842_-	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	86.2	2.6e-36
WP_002995955.1|1017005_1017242_-	DUF3310 domain-containing protein	NA	A0A097PAQ7	Streptococcus_pyogenes_phage	100.0	2.4e-40
WP_011284873.1|1017483_1017840_-	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	100.0	2.9e-61
WP_023079767.1|1017823_1018174_-	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	88.5	9.9e-46
WP_014635521.1|1018127_1018997_-	hypothetical protein	NA	A0A1P8BME8	Lactococcus_phage	65.6	5.8e-103
WP_011284875.1|1019265_1020819_-	hypothetical protein	NA	A0A1P8BM51	Lactococcus_phage	70.6	5.7e-210
WP_002984328.1|1020836_1021319_-	DUF669 domain-containing protein	NA	A0A1P8BM40	Lactococcus_phage	70.7	9.7e-60
WP_075340263.1|1021323_1022727_-	DEAD/DEAH box helicase	NA	A0A1P8BMH7	Lactococcus_phage	72.3	2.3e-194
WP_002984321.1|1022762_1023446_-	AAA family ATPase	NA	J7KC09	Streptococcus_phage	99.1	9.4e-125
WP_011284877.1|1023442_1023727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002984315.1|1023723_1023918_-	hypothetical protein	NA	J7KK69	Streptococcus_phage	54.2	3.9e-12
WP_011284878.1|1023917_1024247_-	hypothetical protein	NA	J7KBZ0	Streptococcus_phage	41.8	7.9e-13
WP_011017881.1|1024327_1024465_-	hypothetical protein	NA	A0A097PAR2	Streptococcus_pyogenes_phage	100.0	3.4e-18
WP_011017882.1|1024461_1024758_-	hypothetical protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	98.0	3.1e-48
WP_011054585.1|1024836_1025022_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
WP_011284879.1|1025188_1025428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984292.1|1025577_1025787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011017884.1|1026045_1026555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984281.1|1026662_1026890_-	hypothetical protein	NA	A0A141E1R7	Streptococcus_phage	57.3	2.9e-14
WP_011054589.1|1026963_1027350_+	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
WP_011284881.1|1027338_1027548_-	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	100.0	1.7e-32
WP_011284882.1|1027601_1028201_+	hypothetical protein	NA	A0A097PAT4	Streptococcus_pyogenes_phage	100.0	3.1e-108
WP_011284883.1|1028230_1028389_-	hypothetical protein	NA	J7KH24	Streptococcus_phage	90.4	8.4e-21
WP_021341080.1|1028447_1028663_+	hypothetical protein	NA	J7KBX0	Streptococcus_phage	95.7	2.5e-28
WP_011284884.1|1029155_1029899_+	helix-turn-helix domain-containing protein	NA	A0A1S5S8T5	Streptococcus_phage	62.9	2.5e-75
WP_023079768.1|1029911_1030721_+	toxin-antitoxin system toxin component MazF family	NA	J7KDP1	Streptococcus_phage	35.8	2.9e-24
WP_023079773.1|1030970_1032059_+|integrase	site-specific integrase	integrase	Q38159	Streptococcus_phage	98.6	3.0e-202
WP_002989605.1|1032421_1033042_+	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
1032102:1032197	attR	ACTCCCACCAGCTCCATCAATGCTTACCGTAAGTAATCATAACTTACTAAAACCTTGTTACATCAAGGTTTTTTCTTTTTGTCTTGTTCATGAGTT	NA	NA	NA	NA
WP_011284887.1|1033298_1035563_-	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
>prophage 5
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	1768906	1789131	1862487	integrase,holin	Streptococcus_phage(56.25%)	26	1772105:1772125	1786432:1786452
WP_011285269.1|1768906_1770127_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.8	1.6e-05
WP_021340699.1|1770137_1772120_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	1.3e-62
1772105:1772125	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
WP_022555250.1|1772214_1773360_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	44.9	3.5e-84
WP_011185066.1|1773614_1773758_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_003058809.1|1774619_1775387_-	helix-turn-helix domain-containing protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
WP_002992503.1|1775540_1775747_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
WP_002992502.1|1775780_1775981_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SE31	Streptococcus_phage	56.7	3.4e-11
WP_002992501.1|1776001_1776409_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
WP_011185071.1|1776820_1777348_+	hypothetical protein	NA	R9QNB1	Lactococcus_phage	40.2	9.7e-21
WP_011285273.1|1777574_1777769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285274.1|1777968_1778160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000916926.1|1778300_1778753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285276.1|1778854_1779187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021340709.1|1779186_1779378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003058810.1|1779389_1779719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922766.1|1779721_1779994_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	3.6e-19
WP_011285278.1|1779994_1780861_+	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	73.8	6.1e-121
WP_011285279.1|1780872_1782267_+	phage protein	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
WP_011285280.1|1782560_1782815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285281.1|1782811_1782985_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
WP_030126555.1|1783165_1783675_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.9e-29
WP_002992480.1|1783748_1784237_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
WP_011285284.1|1784640_1785003_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_011285285.1|1784977_1785361_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	41.7	3.7e-14
WP_011285286.1|1785525_1786179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285287.1|1786575_1789131_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	6.8e-43
1786432:1786452	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
>prophage 6
NZ_CP011069	Streptococcus pyogenes strain STAB09014, complete genome	1862487	1815541	1825529	1862487	integrase	Streptococcus_phage(75.0%)	15	1815115:1815129	1822677:1822691
1815115:1815129	attL	AATCCTTGAAGCTGT	NA	NA	NA	NA
WP_000694580.1|1815541_1815715_-	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
WP_011285313.1|1816001_1817615_-	hypothetical protein	NA	A0A1P8BMF9	Lactococcus_phage	53.1	2.4e-147
WP_011285314.1|1817604_1818126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285315.1|1818135_1818504_-	hypothetical protein	NA	A0A1X9I6M4	Streptococcus_phage	47.1	2.6e-12
WP_021340713.1|1818412_1818604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285317.1|1818603_1818936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285318.1|1818947_1819130_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076638096.1|1819350_1819620_-	phage antirepressor protein	NA	NA	NA	NA	NA
WP_011285320.1|1819649_1820216_-	hypothetical protein	NA	A0A0A7S0G2	Clostridium_phage	42.9	5.0e-23
WP_011285321.1|1820231_1820420_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U7	Streptococcus_phage	59.7	1.7e-12
WP_011285322.1|1820588_1821032_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	48.6	1.8e-07
WP_011285323.1|1821211_1822375_+|integrase	site-specific integrase	integrase	A0A1X9I6A9	Streptococcus_phage	70.5	2.8e-161
WP_002982092.1|1822531_1823143_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
1822677:1822691	attR	ACAGCTTCAAGGATT	NA	NA	NA	NA
WP_002991405.1|1823872_1824145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009880645.1|1824161_1825529_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	63.7	1.0e-154
