assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001677155.1_ASM167715v1	NZ_CP016190	Mycobacteroides abscessus strain FLAC028 chromosome, complete genome	1	806342-806472	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	CTCCCGTCCCGCACAGCGCCGAGCCG	26	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|219aa|up_8|NZ_CP016190.1_797340_797997_+,NA|144aa|up_7|NZ_CP016190.1_798066_798498_+,NA|99aa|up_6|NZ_CP016190.1_798523_798820_-,NA|102aa|up_5|NZ_CP016190.1_799336_799642_-,NA|223aa|up_4|NZ_CP016190.1_799970_800639_-,NA|161aa|up_3|NZ_CP016190.1_800862_801345_-,NA|132aa|up_2|NZ_CP016190.1_801341_801737_-,NA|94aa|up_0|NZ_CP016190.1_804466_804748_+,NA|160aa|down_0|NZ_CP016190.1_807032_807512_+,NA|235aa|down_1|NZ_CP016190.1_807512_808217_+,NA|106aa|down_3|NZ_CP016190.1_808819_809137_+,NA|157aa|down_5|NZ_CP016190.1_810013_810484_-,NA|170aa|down_6|NZ_CP016190.1_810476_810986_-	NA|214aa|up_9|NZ_CP016190.1_796691_797333_+	pfam03167, UDG, Uracil DNA glycosylase superfamily	NA|219aa|up_8|NZ_CP016190.1_797340_797997_+	NA	NA|144aa|up_7|NZ_CP016190.1_798066_798498_+	NA	NA|99aa|up_6|NZ_CP016190.1_798523_798820_-	NA	NA|102aa|up_5|NZ_CP016190.1_799336_799642_-	NA	NA|223aa|up_4|NZ_CP016190.1_799970_800639_-	NA	NA|161aa|up_3|NZ_CP016190.1_800862_801345_-	NA	NA|132aa|up_2|NZ_CP016190.1_801341_801737_-	NA	NA|819aa|up_1|NZ_CP016190.1_801733_804190_-	pfam13476, AAA_23, AAA domain	NA|94aa|up_0|NZ_CP016190.1_804466_804748_+	NA	NA|160aa|down_0|NZ_CP016190.1_807032_807512_+	NA	NA|235aa|down_1|NZ_CP016190.1_807512_808217_+	NA	NA|122aa|down_2|NZ_CP016190.1_808227_808593_+	pfam09951, DUF2185, Protein of unknown function (DUF2185)	NA|106aa|down_3|NZ_CP016190.1_808819_809137_+	NA	NA|260aa|down_4|NZ_CP016190.1_809187_809967_+	pfam09951, DUF2185, Protein of unknown function (DUF2185)	NA|157aa|down_5|NZ_CP016190.1_810013_810484_-	NA	NA|170aa|down_6|NZ_CP016190.1_810476_810986_-	NA	NA|298aa|down_7|NZ_CP016190.1_811121_812015_-	pfam07751, Abi_2, Abi-like protein	NA|697aa|down_8|NZ_CP016190.1_812353_814444_+	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|847aa|down_9|NZ_CP016190.1_814440_816981_+	pfam04851, ResIII, Type III restriction enzyme, res subunit
GCF_001677155.1_ASM167715v1	NZ_CP016190	Mycobacteroides abscessus strain FLAC028 chromosome, complete genome	2	819659-820112	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	CTGCTCCCCGCGTAAGCGGGGATGA,CTGCTCCCCGCGCAAGCGGGGATGA,CTGCTCCCCGCGCAAGCGGGGATGACCC	25,25,28	0	0	NA	NA	I-E:I-E:I-E	6,7,2	7	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|106aa|up_9|NZ_CP016190.1_808819_809137_+,NA|157aa|up_7|NZ_CP016190.1_810013_810484_-,NA|170aa|up_6|NZ_CP016190.1_810476_810986_-,NA|271aa|up_1|NZ_CP016190.1_818508_819321_-,NA|60aa|up_0|NZ_CP016190.1_819395_819575_-,NA|741aa|down_1|NZ_CP016190.1_820651_822874_+,NA|95aa|down_2|NZ_CP016190.1_823520_823805_+,NA|82aa|down_3|NZ_CP016190.1_823931_824177_+,NA|53aa|down_4|NZ_CP016190.1_824195_824354_+,NA|75aa|down_9|NZ_CP016190.1_828646_828871_-	NA|106aa|up_9|NZ_CP016190.1_808819_809137_+	NA	NA|260aa|up_8|NZ_CP016190.1_809187_809967_+	pfam09951, DUF2185, Protein of unknown function (DUF2185)	NA|157aa|up_7|NZ_CP016190.1_810013_810484_-	NA	NA|170aa|up_6|NZ_CP016190.1_810476_810986_-	NA	NA|298aa|up_5|NZ_CP016190.1_811121_812015_-	pfam07751, Abi_2, Abi-like protein	NA|697aa|up_4|NZ_CP016190.1_812353_814444_+	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|847aa|up_3|NZ_CP016190.1_814440_816981_+	pfam04851, ResIII, Type III restriction enzyme, res subunit	NA|480aa|up_2|NZ_CP016190.1_817022_818462_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|271aa|up_1|NZ_CP016190.1_818508_819321_-	NA	NA|60aa|up_0|NZ_CP016190.1_819395_819575_-	NA	NA|71aa|down_0|NZ_CP016190.1_820363_820576_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|741aa|down_1|NZ_CP016190.1_820651_822874_+	NA	NA|95aa|down_2|NZ_CP016190.1_823520_823805_+	NA	NA|82aa|down_3|NZ_CP016190.1_823931_824177_+	NA	NA|53aa|down_4|NZ_CP016190.1_824195_824354_+	NA	NA|204aa|down_5|NZ_CP016190.1_824653_825265_+	cd16962, RuvC, Crossover junction endodeoxyribonuclease RuvC	NA|90aa|down_6|NZ_CP016190.1_825291_825561_+	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|128aa|down_7|NZ_CP016190.1_825557_825941_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|845aa|down_8|NZ_CP016190.1_825968_828503_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|75aa|down_9|NZ_CP016190.1_828646_828871_-	NA
GCF_001677155.1_ASM167715v1	NZ_CP016190	Mycobacteroides abscessus strain FLAC028 chromosome, complete genome	3	4478513-4478610	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,cas4,WYL	Orphan	TCGTTGATGGCACTGGTGTGGGC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,cas4,WYL	NA|129aa|up_4|NZ_CP016190.1_4473043_4473430_-,NA|218aa|up_3|NZ_CP016190.1_4473507_4474161_-,NA|219aa|up_2|NZ_CP016190.1_4474180_4474837_-,NA|199aa|down_5|NZ_CP016190.1_4484038_4484635_-	NA|284aa|up_9|NZ_CP016190.1_4469598_4470450_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|160aa|up_8|NZ_CP016190.1_4470465_4470945_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|312aa|up_7|NZ_CP016190.1_4471086_4472022_+	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|156aa|up_6|NZ_CP016190.1_4472048_4472516_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|170aa|up_5|NZ_CP016190.1_4472540_4473050_+	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|129aa|up_4|NZ_CP016190.1_4473043_4473430_-	NA	NA|218aa|up_3|NZ_CP016190.1_4473507_4474161_-	NA	NA|219aa|up_2|NZ_CP016190.1_4474180_4474837_-	NA	NA|498aa|up_1|NZ_CP016190.1_4474841_4476335_-	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only]	NA|628aa|up_0|NZ_CP016190.1_4476331_4478215_-	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only]	NA|230aa|down_0|NZ_CP016190.1_4480694_4481384_+	pfam13462, Thioredoxin_4, Thioredoxin	NA|294aa|down_1|NZ_CP016190.1_4481380_4482262_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|121aa|down_2|NZ_CP016190.1_4482279_4482642_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|308aa|down_3|NZ_CP016190.1_4482638_4483562_+	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|156aa|down_4|NZ_CP016190.1_4483558_4484026_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|199aa|down_5|NZ_CP016190.1_4484038_4484635_-	NA	NA|606aa|down_6|NZ_CP016190.1_4484816_4486634_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|814aa|down_7|NZ_CP016190.1_4486654_4489096_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|977aa|down_8|NZ_CP016190.1_4489254_4492185_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|437aa|down_9|NZ_CP016190.1_4492192_4493503_+	PRK09265, PRK09265, aminotransferase AlaT; Validated
