assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001676805.1_ASM167680v1	NZ_CP015398	Lactobacillus brevis strain NPS-QW-145 chromosome, complete genome	1	79605-80762	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	csn2,cas2,cas1,cas9	csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	Type II-C,Type II-A,Type II-B	GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC,GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC,GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	36,36,36	0	0	NA	NA	NA:NA:NA	17,17,17	17	TypeII-C,TypeII-A,TypeII-B	csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	NA|141aa|up_9|NZ_CP015398.1_68762_69185_+,NA|177aa|down_5|NZ_CP015398.1_89321_89852_-,NA|163aa|down_6|NZ_CP015398.1_89838_90327_-	NA|141aa|up_9|NZ_CP015398.1_68762_69185_+	NA	NA|370aa|up_8|NZ_CP015398.1_69252_70362_-	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|109aa|up_7|NZ_CP015398.1_70672_70999_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|105aa|up_6|NZ_CP015398.1_71000_71315_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|177aa|up_5|NZ_CP015398.1_71319_71850_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|278aa|up_4|NZ_CP015398.1_71923_72757_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|189aa|up_3|NZ_CP015398.1_73017_73584_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|746aa|up_2|NZ_CP015398.1_74197_76435_-	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|351aa|up_1|NZ_CP015398.1_76440_77493_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|460aa|up_0|NZ_CP015398.1_77555_78935_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	csn2|222aa|down_0|NZ_CP015398.1_80796_81462_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_CP015398.1_81458_81764_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP015398.1_81741_82647_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1369aa|down_3|NZ_CP015398.1_82856_86963_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|548aa|down_4|NZ_CP015398.1_87488_89132_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|177aa|down_5|NZ_CP015398.1_89321_89852_-	NA	NA|163aa|down_6|NZ_CP015398.1_89838_90327_-	NA	NA|333aa|down_7|NZ_CP015398.1_90561_91560_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|461aa|down_8|NZ_CP015398.1_91754_93137_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|558aa|down_9|NZ_CP015398.1_93157_94831_+	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins
GCF_001676805.1_ASM167680v1	NZ_CP015398	Lactobacillus brevis strain NPS-QW-145 chromosome, complete genome	2	391217-391302	2	CRISPRCasFinder	no		csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	Orphan	GTATTCCCCACATGTGTGGGGGTGA	25	0	0	NA	NA	I-E,II-B	1	1	Orphan	csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	NA|83aa|up_8|NZ_CP015398.1_381617_381866_+,NA|107aa|up_7|NZ_CP015398.1_381890_382211_+,NA|88aa|up_6|NZ_CP015398.1_382343_382607_+,NA	NA|104aa|up_9|NZ_CP015398.1_381291_381603_+	pfam10078, DUF2316, Uncharacterized protein conserved in bacteria (DUF2316)	NA|83aa|up_8|NZ_CP015398.1_381617_381866_+	NA	NA|107aa|up_7|NZ_CP015398.1_381890_382211_+	NA	NA|88aa|up_6|NZ_CP015398.1_382343_382607_+	NA	NA|481aa|up_5|NZ_CP015398.1_383626_385069_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|143aa|up_4|NZ_CP015398.1_385213_385642_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|146aa|up_3|NZ_CP015398.1_385726_386164_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|562aa|up_2|NZ_CP015398.1_386247_387933_-	pfam10500, SR-25, Nuclear RNA-splicing-associated protein	NA|496aa|up_1|NZ_CP015398.1_388110_389598_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|274aa|up_0|NZ_CP015398.1_390058_390880_+	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase	NA|192aa|down_0|NZ_CP015398.1_391634_392210_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|476aa|down_1|NZ_CP015398.1_392279_393707_+	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like	NA|281aa|down_2|NZ_CP015398.1_393808_394651_-	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|272aa|down_3|NZ_CP015398.1_394890_395706_+	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|389aa|down_4|NZ_CP015398.1_395956_397123_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|449aa|down_5|NZ_CP015398.1_397280_398627_+	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|205aa|down_6|NZ_CP015398.1_398716_399331_-	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]	NA|490aa|down_7|NZ_CP015398.1_399434_400904_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|220aa|down_8|NZ_CP015398.1_401068_401728_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|249aa|down_9|NZ_CP015398.1_401876_402623_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA
GCF_001676805.1_ASM167680v1	NZ_CP015398	Lactobacillus brevis strain NPS-QW-145 chromosome, complete genome	3	1416351-1416623	2,2,3	CRT,PILER-CR,CRISPRCasFinder	no		csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	Orphan	GGTATTCCCCACGGGTGTGGGGGTGATCC,GGTATTCCCCACGGGTGTGGGGGTGATCC,GTATTCCCCACGGGTGTGGGGGTGATCC	29,29,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	3,3,4	4	Orphan	csa3,csn2,cas2,cas1,cas9,cas3,DEDDh,DinG	NA,NA	NA|279aa|up_9|NZ_CP015398.1_1408616_1409453_+	PRK08263, PRK08263, short chain dehydrogenase; Provisional	NA|135aa|up_8|NZ_CP015398.1_1409461_1409866_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|162aa|up_7|NZ_CP015398.1_1409955_1410441_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|478aa|up_6|NZ_CP015398.1_1410549_1411983_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|202aa|up_5|NZ_CP015398.1_1411969_1412575_+	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|149aa|up_4|NZ_CP015398.1_1412635_1413082_-	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|149aa|up_3|NZ_CP015398.1_1413078_1413525_-	smart00850, LytTR, LytTr DNA-binding domain	NA|151aa|up_2|NZ_CP015398.1_1413686_1414139_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|480aa|up_1|NZ_CP015398.1_1414260_1415700_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|104aa|up_0|NZ_CP015398.1_1415829_1416141_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|118aa|down_0|NZ_CP015398.1_1416702_1417056_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|336aa|down_1|NZ_CP015398.1_1417177_1418185_+	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	NA|217aa|down_2|NZ_CP015398.1_1418318_1418969_+	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|162aa|down_3|NZ_CP015398.1_1419057_1419543_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|489aa|down_4|NZ_CP015398.1_1419908_1421375_+	pfam00199, Catalase, Catalase	NA|182aa|down_5|NZ_CP015398.1_1421468_1422014_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|141aa|down_6|NZ_CP015398.1_1422218_1422641_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|421aa|down_7|NZ_CP015398.1_1422719_1423982_-	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|199aa|down_8|NZ_CP015398.1_1424113_1424710_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|275aa|down_9|NZ_CP015398.1_1424785_1425610_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
