The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013557	Rhizobium phaseoli strain N841 chromosome, complete genome	4384120	1549485	1558686	4384120		Enterobacteria_phage(28.57%)	9	NA	NA
WP_012483354.1|1549485_1550784_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.2	5.4e-97
WP_003547190.1|1550793_1551270_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_064830840.1|1551273_1552641_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.6	8.9e-34
WP_012483356.1|1552640_1553252_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.6	2.0e-17
WP_064830841.1|1553303_1554173_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.7	5.2e-96
WP_064830842.1|1554182_1555070_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_064821775.1|1555073_1556129_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.2	9.2e-95
WP_012483360.1|1556135_1556714_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	8.1e-37
WP_064830843.1|1556703_1558686_-	glycosyltransferase family 1 protein	NA	F2Y0P4	Organic_Lake_phycodnavirus	36.4	8.8e-06
>prophage 2
NZ_CP013557	Rhizobium phaseoli strain N841 chromosome, complete genome	4384120	1877049	1890153	4384120	tRNA	uncultured_Mediterranean_phage(90.91%)	13	NA	NA
WP_064831723.1|1877049_1878063_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.6	4.8e-24
WP_064831724.1|1878081_1878939_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.3	8.1e-33
WP_064830934.1|1878935_1879640_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.2	1.9e-40
WP_012483600.1|1879827_1880019_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	70.5	8.9e-09
WP_012483601.1|1880070_1880697_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_012483602.1|1880693_1881521_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	1.2e-52
WP_064830935.1|1881617_1882901_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	7.5e-99
WP_004678859.1|1882905_1883679_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	1.8e-23
WP_010025231.1|1883675_1884329_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.7	5.2e-16
WP_064830936.1|1884468_1886058_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.0	5.0e-12
WP_064830937.1|1886144_1887017_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_004678848.1|1887220_1887568_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.1	4.1e-12
WP_064830938.1|1887612_1890153_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	50.2	5.7e-58
>prophage 3
NZ_CP013557	Rhizobium phaseoli strain N841 chromosome, complete genome	4384120	2175643	2185906	4384120		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_064831090.1|2175643_2178565_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.2	0.0e+00
WP_004671899.1|2178847_2179363_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	72.9	1.2e-44
WP_004671901.1|2179464_2180112_-	MarC family protein	NA	NA	NA	NA	NA
WP_029531195.1|2180349_2183172_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.6	8.8e-76
WP_003539654.1|2183573_2183729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825256.1|2183871_2184150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825257.1|2184240_2184735_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.8	3.6e-25
WP_012483798.1|2184793_2185366_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	5.7e-43
WP_004671916.1|2185396_2185906_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.2e-44
>prophage 4
NZ_CP013557	Rhizobium phaseoli strain N841 chromosome, complete genome	4384120	3912677	3922736	4384120		Mycobacterium_phage(28.57%)	9	NA	NA
WP_064831553.1|3912677_3913388_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	48.7	2.7e-50
WP_064822823.1|3913387_3913744_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_064822824.1|3913740_3914469_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	37.8	3.4e-40
WP_064822825.1|3914475_3915699_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.4	2.9e-15
WP_064831554.1|3915801_3916776_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	75.1	2.5e-139
WP_064822827.1|3916971_3919176_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	51.7	1.5e-211
WP_012485335.1|3919154_3919559_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_010068756.1|3919575_3919797_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	52.1	1.8e-16
WP_064831555.1|3920471_3922736_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	41.2	5.1e-127
>prophage 1
NZ_CP013561	Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence	433209	238753	277302	433209	plate,transposase	Stx2-converting_phage(100.0%)	21	NA	NA
WP_008536038.1|238753_239980_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_008536039.1|239943_241830_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_004680427.1|241829_242333_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_004680426.1|242419_242953_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_004680425.1|243068_244556_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_016737476.1|244558_245113_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_004680423.1|245148_246141_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_064812016.1|247839_250119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016737477.1|252675_254031_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_016737478.1|254092_255259_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_008536065.1|255258_256548_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_012489525.1|256557_260163_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_012489526.1|260459_262076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_170960111.1|262246_262414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009996985.1|262778_264344_-|transposase	IS66-like element ISRel19 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	44.4	2.5e-112
WP_009996986.1|264416_264764_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	53.9	4.6e-27
WP_009996987.1|264760_265123_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_012489527.1|266561_267572_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008536079.1|270590_271478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081278607.1|272548_275851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011053406.1|276135_277302_+|transposase	IS110-like element ISRel9 family transposase	transposase	NA	NA	NA	NA
