The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013542	Rhizobium phaseoli strain R620 chromosome, complete genome	4424308	1540244	1549445	4424308		Enterobacteria_phage(28.57%)	9	NA	NA
WP_012483354.1|1540244_1541543_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.2	5.4e-97
WP_003547190.1|1541552_1542029_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_012483355.1|1542032_1543400_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.6	6.8e-34
WP_012483356.1|1543399_1544011_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.6	2.0e-17
WP_012483357.1|1544062_1544932_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.0	1.2e-95
WP_012483358.1|1544941_1545829_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_064825071.1|1545832_1546888_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.5	4.1e-95
WP_012483360.1|1546894_1547473_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	8.1e-37
WP_064825072.1|1547462_1549445_-	hypothetical protein	NA	F2Y0P4	Organic_Lake_phycodnavirus	36.4	8.8e-06
>prophage 2
NZ_CP013542	Rhizobium phaseoli strain R620 chromosome, complete genome	4424308	1913718	1926821	4424308	tRNA	uncultured_Mediterranean_phage(90.91%)	13	NA	NA
WP_041683873.1|1913718_1914732_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	6.2e-24
WP_029531141.1|1914750_1915608_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	3.6e-33
WP_012483599.1|1915604_1916309_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.2	3.3e-40
WP_012483600.1|1916496_1916688_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	70.5	8.9e-09
WP_012483601.1|1916739_1917366_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_012483602.1|1917362_1918190_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	1.2e-52
WP_012483603.1|1918286_1919570_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	9.7e-99
WP_004678859.1|1919574_1920348_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	1.8e-23
WP_010025231.1|1920344_1920998_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.7	5.2e-16
WP_016732897.1|1921137_1922727_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.0	5.0e-12
WP_064825178.1|1922812_1923685_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_004678848.1|1923888_1924236_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.1	4.1e-12
WP_064825179.1|1924280_1926821_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	50.2	4.3e-58
>prophage 3
NZ_CP013542	Rhizobium phaseoli strain R620 chromosome, complete genome	4424308	2161683	2171946	4424308		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_012483791.1|2161683_2164605_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.2	0.0e+00
WP_004671899.1|2164887_2165403_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	72.9	1.2e-44
WP_004671901.1|2165504_2166152_-	MarC family protein	NA	NA	NA	NA	NA
WP_029531195.1|2166389_2169212_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.6	8.8e-76
WP_003539654.1|2169613_2169769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825256.1|2169911_2170190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825257.1|2170280_2170775_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.8	3.6e-25
WP_012483798.1|2170833_2171406_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	5.7e-43
WP_004671916.1|2171436_2171946_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.2e-44
>prophage 4
NZ_CP013542	Rhizobium phaseoli strain R620 chromosome, complete genome	4424308	3931376	3941495	4424308		Mycobacterium_phage(28.57%)	9	NA	NA
WP_012485329.1|3931376_3932087_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	48.7	2.1e-50
WP_012485330.1|3932086_3932443_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_012485331.1|3932439_3933168_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	38.2	4.0e-41
WP_012485332.1|3933250_3934495_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.5	1.9e-14
WP_064825673.1|3934596_3935571_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	74.4	4.7e-138
WP_041683783.1|3935750_3937955_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	51.8	3.9e-212
WP_012485335.1|3937933_3938338_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_010068756.1|3938354_3938576_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	52.1	1.8e-16
WP_012485336.1|3939251_3941495_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	37.2	5.1e-127

