The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	832488	841163	4459165		uncultured_phage(33.33%)	6	NA	NA
WP_064842357.1|832488_833451_+	glycosyl transferase	NA	D6PEY2	uncultured_phage	26.1	1.5e-11
WP_064842359.1|833526_834576_+	NAD-dependent epimerase/dehydratase family protein	NA	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	29.4	4.9e-16
WP_064842360.1|834585_835425_+	hypothetical protein	NA	D6PFI0	uncultured_phage	40.2	8.0e-09
WP_064842362.1|835511_836507_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A0A0Q3B9	Pectobacterium_bacteriophage	35.8	5.7e-22
WP_064842364.1|837459_839208_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y1H0	Organic_Lake_phycodnavirus	28.9	2.8e-32
WP_064842366.1|839228_841163_-	acyltransferase	NA	C6ZR20	Salmonella_phage	35.6	1.9e-98
>prophage 2
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	1535067	1544268	4459165		Enterobacteria_phage(28.57%)	9	NA	NA
WP_012483354.1|1535067_1536366_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.2	5.4e-97
WP_003547190.1|1536375_1536852_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_012483355.1|1536855_1538223_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.6	6.8e-34
WP_012483356.1|1538222_1538834_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.6	2.0e-17
WP_012483357.1|1538885_1539755_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.0	1.2e-95
WP_012483358.1|1539764_1540652_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_064825071.1|1540655_1541711_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.5	4.1e-95
WP_012483360.1|1541717_1542296_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	8.1e-37
WP_064842602.1|1542285_1544268_-	hypothetical protein	NA	F2Y0P4	Organic_Lake_phycodnavirus	36.4	8.8e-06
>prophage 3
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	1877674	1890777	4459165	tRNA	uncultured_Mediterranean_phage(90.91%)	13	NA	NA
WP_064843541.1|1877674_1878688_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	4.8e-24
WP_029531141.1|1878706_1879564_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	3.6e-33
WP_012483599.1|1879560_1880265_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.2	3.3e-40
WP_012483600.1|1880452_1880644_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	70.5	8.9e-09
WP_012483601.1|1880695_1881322_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_012483602.1|1881318_1882146_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	1.2e-52
WP_012483603.1|1882242_1883526_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	9.7e-99
WP_004678859.1|1883530_1884304_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	1.8e-23
WP_010025231.1|1884300_1884954_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.7	5.2e-16
WP_064842717.1|1885093_1886683_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.0	5.0e-12
WP_064842719.1|1886768_1887641_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_004678848.1|1887844_1888192_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.1	4.1e-12
WP_064842721.1|1888236_1890777_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	50.2	2.8e-57
>prophage 4
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	1915375	1970823	4459165	transposase,lysis,tRNA,protease	Stx2-converting_phage(16.67%)	60	NA	NA
WP_064825192.1|1915375_1916878_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_064831005.1|1916880_1917384_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_064831006.1|1917387_1917861_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_064842733.1|1917963_1918362_+	NADH:ubiquinone oxidoreductase subunit NDUFA12	NA	NA	NA	NA	NA
WP_016732913.1|1918475_1918916_+	DUF2155 domain-containing protein	NA	NA	NA	NA	NA
WP_190299956.1|1919000_1919930_-	DUF2167 domain-containing protein	NA	NA	NA	NA	NA
WP_012483634.1|1920007_1920622_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_016732915.1|1920629_1921985_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_016732916.1|1921989_1922463_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_064821922.1|1922483_1922921_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_064831008.1|1923072_1923831_-	DsbA family protein	NA	NA	NA	NA	NA
WP_004671237.1|1923909_1924083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064842736.1|1924041_1925199_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_064842737.1|1925238_1926582_-	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
WP_064834770.1|1926790_1928695_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_004671231.1|1928799_1929213_+	SHOCT domain-containing protein	NA	NA	NA	NA	NA
WP_029531151.1|1929434_1930652_+	LL-diaminopimelate aminotransferase	NA	NA	NA	NA	NA
WP_064842739.1|1930713_1932039_+	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_064842740.1|1932245_1932488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064842742.1|1932568_1934371_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	31.5	1.6e-54
WP_064831727.1|1935217_1936294_-	YcbK family protein	NA	A0A2D0VKR9	Proteus_phage	50.7	6.8e-13
WP_064831015.1|1936461_1936902_-	VOC family protein	NA	NA	NA	NA	NA
WP_004675946.1|1937096_1937675_+	CspA family cold shock protein	NA	A0A1W6JNX5	Morganella_phage	42.4	3.9e-07
WP_010021174.1|1937676_1938159_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_190299951.1|1938663_1938849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004675942.1|1938980_1939286_+	ETC complex I subunit	NA	NA	NA	NA	NA
WP_016732930.1|1939759_1940029_+	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_004675939.1|1940054_1940402_+	dehydrogenase	NA	NA	NA	NA	NA
WP_012483648.1|1940697_1942539_-	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_064842743.1|1942997_1943234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_097541909.1|1943338_1944098_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	42.1	1.4e-23
WP_064842745.1|1944286_1944679_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014330938.1|1944675_1945023_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	64.5	3.4e-38
WP_064842747.1|1945068_1946703_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.9	7.5e-104
WP_064843543.1|1946772_1947009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041683621.1|1947450_1947783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012483651.1|1947986_1948298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010015252.1|1948447_1948888_-	DUF3597 domain-containing protein	NA	NA	NA	NA	NA
WP_081284259.1|1949355_1949988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012483654.1|1950050_1950824_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.6	1.6e-32
WP_012483655.1|1950859_1952005_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_029531157.1|1952006_1953209_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004675930.1|1953303_1954329_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.4	1.5e-78
WP_064842750.1|1954682_1955873_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_064842752.1|1955909_1957058_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_010024961.1|1957086_1957332_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_064842754.1|1957491_1958277_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_004675925.1|1958404_1959238_+	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_010021897.1|1959376_1959580_+	DUF3126 family protein	NA	NA	NA	NA	NA
WP_010021895.1|1959850_1960222_+	phasin family protein	NA	NA	NA	NA	NA
WP_012483661.1|1960499_1960853_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.1	1.7e-13
WP_012483662.1|1960863_1963353_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.3e-171
WP_016732942.1|1963431_1963857_-	HIT family protein	NA	NA	NA	NA	NA
WP_012483664.1|1963911_1965102_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_016732944.1|1965179_1965899_-	glycerophosphodiester phosphodiesterase	NA	A0A1J0F961	Only_Syngen_Nebraska_virus	27.5	6.0e-13
WP_064842755.1|1965895_1966366_-	RidA family protein	NA	NA	NA	NA	NA
WP_004678603.1|1966502_1967339_+	cell envelope integrity EipB family protein	NA	NA	NA	NA	NA
WP_012483666.1|1967538_1968615_+	toxic anion resistance protein	NA	H6X3X9	Enterobacteria_phage	23.5	2.2e-11
WP_041683875.1|1968629_1970198_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_012483668.1|1970205_1970823_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
>prophage 5
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	2132345	2142608	4459165		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_012483791.1|2132345_2135267_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.2	0.0e+00
WP_004671899.1|2135549_2136065_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	72.9	1.2e-44
WP_004671901.1|2136166_2136814_-	MarC family protein	NA	NA	NA	NA	NA
WP_029531195.1|2137051_2139874_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.6	8.8e-76
WP_003539654.1|2140275_2140431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825256.1|2140573_2140852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064825257.1|2140942_2141437_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.8	3.6e-25
WP_012483798.1|2141495_2142068_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	5.7e-43
WP_004671916.1|2142098_2142608_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.2e-44
>prophage 6
NZ_CP013522	Rhizobium phaseoli strain R744 chromosome, complete genome	4459165	3986972	3997091	4459165		Mycobacterium_phage(28.57%)	9	NA	NA
WP_012485329.1|3986972_3987683_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	48.7	2.1e-50
WP_012485330.1|3987682_3988039_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_012485331.1|3988035_3988764_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	38.2	4.0e-41
WP_012485332.1|3988846_3990091_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.5	1.9e-14
WP_064825673.1|3990192_3991167_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	74.4	4.7e-138
WP_041683783.1|3991346_3993551_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	51.8	3.9e-212
WP_012485335.1|3993529_3993934_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_010068756.1|3993950_3994172_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	52.1	1.8e-16
WP_064843350.1|3994847_3997091_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	37.2	6.6e-127
