assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001663735.1_ASM166373v1	NZ_CP014890	Lactobacillus backii strain TMW 1.1992 chromosome, complete genome	1	1126697-1130886	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j	Type II-C, Type II-B, or Type II-C?,Type II-A,Type II-B	GCTATTGATTCCTTCAGTTTTCAGCTAAAATAGATC,GCTATTGATTCCTTCAGTTTTCAGCTAAAATAGATC,GCTATTGATTCCTTCAGTTTTCAGCTAAAATAGATC,GCTATTGATTCCTTCAGTTTTCAGCTAAAATAGATC	36,36,36,36	8	12	1128579-1128608|1128909-1128938|1128975-1129004|1129437-1129466|1129437-1129466|1129964-1129993|1129964-1129993|1130030-1130059|1130030-1130059|1130360-1130389|1130360-1130389|1130755-1130784	NZ_CP014890.1_826149-826120|NZ_CP014890.1_817027-816998|NZ_CP014890.1_458307-458336|NZ_CP014890.1_454207-454178|NZ_CP014890.1_830470-830441|NZ_CP014890.1_466127-466098|NZ_CP014890.1_840009-839980|NZ_CP014890.1_452179-452150|NZ_CP014890.1_825814-825785|NZ_CP014890.1_471393-471364|NZ_CP014890.1_845275-845246|NZ_CP014890.1_1980099-1980128	NA:NA:NA:NA	63,63,63,63	63	TypeII-C,TypeII-B,orTypeII-C?,TypeII-A,TypeII-B	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j,RT	NA|112aa|up_1|NZ_CP014890.1_1125516_1125852_+,NA|87aa|up_0|NZ_CP014890.1_1126250_1126511_+,NA|111aa|down_5|NZ_CP014890.1_1137832_1138165_+	NA|107aa|up_9|NZ_CP014890.1_1109994_1110315_-	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|162aa|up_8|NZ_CP014890.1_1110336_1110822_-	COG3467, COG3467, Predicted flavin-nucleotide-binding protein [General function prediction only]	NA|841aa|up_7|NZ_CP014890.1_1111805_1114328_-	TIGR02687, conserved_hypothetical_protein, TIGR02687 family protein	NA|1193aa|up_6|NZ_CP014890.1_1114478_1118057_-	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX	NA|1218aa|up_5|NZ_CP014890.1_1118210_1121864_-	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|193aa|up_4|NZ_CP014890.1_1121943_1122522_-	pfam08747, DUF1788, Domain of unknown function (DUF1788)	NA|195aa|up_3|NZ_CP014890.1_1122524_1123109_-	pfam08849, DUF1819, Putative inner membrane protein (DUF1819)	NA|190aa|up_2|NZ_CP014890.1_1124759_1125329_+	pfam16729, DUF5067, Domain of unknown function (DUF5067)	NA|112aa|up_1|NZ_CP014890.1_1125516_1125852_+	NA	NA|87aa|up_0|NZ_CP014890.1_1126250_1126511_+	NA	cas2|108aa|down_0|NZ_CP014890.1_1130938_1131262_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|301aa|down_1|NZ_CP014890.1_1131254_1132157_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1123aa|down_2|NZ_CP014890.1_1132159_1135528_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|251aa|down_3|NZ_CP014890.1_1135765_1136518_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|287aa|down_4|NZ_CP014890.1_1136982_1137843_+	pfam09524, Phg_2220_C, Conserved phage C-terminus (Phg_2220_C)	NA|111aa|down_5|NZ_CP014890.1_1137832_1138165_+	NA	NA|428aa|down_6|NZ_CP014890.1_1138276_1139560_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|336aa|down_7|NZ_CP014890.1_1139594_1140602_+	pfam03796, DnaB_C, DnaB-like helicase C terminal domain	NA|255aa|down_8|NZ_CP014890.1_1140783_1141548_+	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA	NA|122aa|down_9|NZ_CP014890.1_1142001_1142367_-	PRK09907, PRK09907, endoribonuclease MazF
GCF_001663735.1_ASM166373v1	NZ_CP014890	Lactobacillus backii strain TMW 1.1992 chromosome, complete genome	2	1197973-1198070	2	CRISPRCasFinder	no	cas3	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j	Unclear	GTGGTAAGAACACGGTATTTACCCGG	26	0	0	NA	NA	NA	1	1	Unclear	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j,RT	NA|71aa|up_4|NZ_CP014890.1_1194273_1194486_-,NA|70aa|up_3|NZ_CP014890.1_1194498_1194708_-,NA|109aa|down_2|NZ_CP014890.1_1200302_1200629_+,NA|61aa|down_3|NZ_CP014890.1_1200808_1200991_+	NA|327aa|up_9|NZ_CP014890.1_1189722_1190703_+	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|349aa|up_8|NZ_CP014890.1_1190875_1191922_-	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like	NA|202aa|up_7|NZ_CP014890.1_1192075_1192681_-	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	NA|186aa|up_6|NZ_CP014890.1_1193131_1193689_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|114aa|up_5|NZ_CP014890.1_1193709_1194051_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|71aa|up_4|NZ_CP014890.1_1194273_1194486_-	NA	NA|70aa|up_3|NZ_CP014890.1_1194498_1194708_-	NA	NA|145aa|up_2|NZ_CP014890.1_1194814_1195249_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|119aa|up_1|NZ_CP014890.1_1195769_1196126_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|455aa|up_0|NZ_CP014890.1_1196164_1197529_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|478aa|down_0|NZ_CP014890.1_1198302_1199736_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|114aa|down_1|NZ_CP014890.1_1199757_1200099_-	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|109aa|down_2|NZ_CP014890.1_1200302_1200629_+	NA	NA|61aa|down_3|NZ_CP014890.1_1200808_1200991_+	NA	NA|125aa|down_4|NZ_CP014890.1_1200980_1201355_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|518aa|down_5|NZ_CP014890.1_1201363_1202917_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|339aa|down_6|NZ_CP014890.1_1203034_1204051_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|269aa|down_7|NZ_CP014890.1_1204067_1204874_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|1185aa|down_8|NZ_CP014890.1_1204870_1208425_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|233aa|down_9|NZ_CP014890.1_1208439_1209138_-	PRK00102, rnc, ribonuclease III; Reviewed
GCF_001663735.1_ASM166373v1	NZ_CP014890	Lactobacillus backii strain TMW 1.1992 chromosome, complete genome	3	2161894-2161981	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j	Orphan	AAAAACCGCATCACTTATGATATGGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j,RT	NA|352aa|up_3|NZ_CP014890.1_2157155_2158211_-,NA	NA|298aa|up_9|NZ_CP014890.1_2149809_2150703_-	PRK06194, PRK06194, hypothetical protein; Provisional	NA|205aa|up_8|NZ_CP014890.1_2150832_2151447_-	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator	NA|178aa|up_7|NZ_CP014890.1_2151564_2152098_-	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region	NA|280aa|up_6|NZ_CP014890.1_2152241_2153081_+	PRK06182, PRK06182, short chain dehydrogenase; Validated	NA|663aa|up_5|NZ_CP014890.1_2153355_2155344_-	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]	NA|318aa|up_4|NZ_CP014890.1_2155968_2156922_-	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins	NA|352aa|up_3|NZ_CP014890.1_2157155_2158211_-	NA	NA|376aa|up_2|NZ_CP014890.1_2158341_2159469_-	pfam06347, SH3_4, Bacterial SH3 domain	NA|173aa|up_1|NZ_CP014890.1_2160225_2160744_+	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator	NA|278aa|up_0|NZ_CP014890.1_2160830_2161664_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|426aa|down_0|NZ_CP014890.1_2163768_2165046_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|428aa|down_1|NZ_CP014890.1_2165467_2166751_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|271aa|down_2|NZ_CP014890.1_2166845_2167658_-	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	NA|276aa|down_3|NZ_CP014890.1_2167748_2168576_-	pfam09648, YycI, YycH protein	NA|443aa|down_4|NZ_CP014890.1_2168576_2169905_-	pfam07435, YycH, YycH protein	NA|631aa|down_5|NZ_CP014890.1_2169894_2171787_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|238aa|down_6|NZ_CP014890.1_2171978_2172692_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|453aa|down_7|NZ_CP014890.1_2172895_2174254_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|255aa|down_8|NZ_CP014890.1_2174885_2175650_+	pfam07722, Peptidase_C26, Peptidase C26	NA|392aa|down_9|NZ_CP014890.1_2175732_2176908_-	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX
GCF_001663735.1_ASM166373v1	NZ_CP014893	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence	1	11785-11874	1	CRISPRCasFinder	no			Orphan	ATGAGTTTTAGAAGGATGTTAAAT	24	1	1	11809-11850	NZ_CP014897.1_11755-11714	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,cas2,cas1,cas9,cas14j,RT	NA,NA|120aa|down_1|NZ_CP014893.1_12640_13000_-	NA|410aa|up_9|NZ_CP014893.1_1479_2709_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|159aa|up_8|NZ_CP014893.1_2713_3190_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|139aa|up_7|NZ_CP014893.1_3196_3613_+	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway	NA|459aa|up_6|NZ_CP014893.1_3786_5163_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|460aa|up_5|NZ_CP014893.1_5417_6797_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|281aa|up_4|NZ_CP014893.1_6777_7620_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|257aa|up_3|NZ_CP014893.1_7612_8383_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|253aa|up_2|NZ_CP014893.1_8411_9170_+	PRK06079, PRK06079, enoyl-[acyl-carrier-protein] reductase FabI	NA|416aa|up_1|NZ_CP014893.1_9315_10563_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|295aa|up_0|NZ_CP014893.1_10804_11689_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|196aa|down_0|NZ_CP014893.1_11968_12556_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|120aa|down_1|NZ_CP014893.1_12640_13000_-	NA	NA|679aa|down_2|NZ_CP014893.1_13262_15299_+	pfam02705, K_trans, K+ potassium transporter	NA|84aa|down_3|NZ_CP014893.1_15604_15856_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|281aa|down_4|NZ_CP014893.1_15909_16752_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|116aa|down_5|NZ_CP014893.1_17016_17364_-	pfam17363, DUF5388, Family of unknown function (DUF5388)	NA|267aa|down_6|NZ_CP014893.1_17365_18166_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|103aa|down_7|NZ_CP014893.1_19579_19888_+	pfam18008, Bac_RepA_C, Replication initiator protein A C-terminal domain	NA|94aa|down_8|NZ_CP014893.1_20140_20422_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|246aa|down_9|NZ_CP014893.1_20866_21604_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
