The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012605	Ralstonia insidiosa strain FC1138 chromosome 1, complete sequence	3968071	246031	291475	3968071	holin,integrase,transposase	Catovirus(20.0%)	42	253021:253036	290881:290896
WP_031329789.1|246031_248137_+|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
WP_021196282.1|248326_248629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021196283.1|248625_249714_-	DMT family transporter	NA	NA	NA	NA	NA
WP_021196284.1|249912_251358_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_021196285.1|251626_253150_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
253021:253036	attL	CGGCTACAAGGCCAGC	NA	NA	NA	NA
WP_021196286.1|253166_254900_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	28.9	1.7e-53
WP_080981262.1|254899_255709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196288.1|255772_256075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031329795.1|256754_257027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196290.1|257328_257787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196291.1|257865_258867_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_021196292.1|258921_259623_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_021196293.1|259801_260161_-	DUF2917 domain-containing protein	NA	NA	NA	NA	NA
WP_021196294.1|260309_261272_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_021196295.1|261342_261645_-	DUF493 family protein	NA	NA	NA	NA	NA
WP_021196296.1|261665_262859_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	38.6	2.8e-60
WP_021196297.1|262943_263600_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_021196298.1|263639_263969_-	ferredoxin	NA	NA	NA	NA	NA
WP_021196299.1|264419_265709_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_049286157.1|265834_267826_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_021196301.1|267851_269168_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_021196302.1|269225_269963_-	YukJ family protein	NA	NA	NA	NA	NA
WP_021196303.1|270098_270653_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_021196304.1|270754_271270_-	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	50.0	1.2e-36
WP_037012267.1|271351_271921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196306.1|271946_272774_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_021196307.1|272877_273252_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_021196308.1|273550_274192_+	LysE family transporter	NA	NA	NA	NA	NA
WP_021196309.1|274195_275623_-	MFS transporter	NA	NA	NA	NA	NA
WP_021196310.1|275787_276285_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_021196312.1|276975_277668_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	A0A1D8KPK4	Synechococcus_phage	28.7	9.8e-05
WP_082931201.1|277664_278912_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_082931202.1|278908_279517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196314.1|279513_280407_+	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_082931203.1|280410_281337_+	TniQ family protein	NA	NA	NA	NA	NA
WP_156667239.1|281447_281912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021196317.1|282355_282862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064496166.1|283176_285909_-	DUF3893 domain-containing protein	NA	NA	NA	NA	NA
WP_064496167.1|285921_289161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004633552.1|289179_289551_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_004633551.1|289592_289883_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_009238807.1|289945_291475_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	46.1	1.4e-115
290881:290896	attR	CGGCTACAAGGCCAGC	NA	NA	NA	NA
>prophage 2
NZ_CP012605	Ralstonia insidiosa strain FC1138 chromosome 1, complete sequence	3968071	2295273	2304722	3968071	integrase,transposase	Bacillus_phage(42.86%)	9	2297844:2297865	2305045:2305066
WP_021194064.1|2295273_2296968_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.1	1.9e-57
WP_021194063.1|2297138_2297465_+	ferredoxin family protein	NA	NA	NA	NA	NA
2297844:2297865	attL	TCGATCCCGGCCTCGGGCACCA	NA	NA	NA	NA
WP_064496234.1|2298019_2299015_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	38.1	1.6e-53
WP_012760797.1|2299082_2300609_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.1	9.7e-13
WP_004630242.1|2300598_2301384_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	35.8	6.7e-34
WP_104656273.1|2301460_2302420_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	33.8	5.0e-31
WP_064496235.1|2302664_2303717_+	RNA-directed DNA polymerase	NA	A0A0N7AE80	Bacillus_phage	34.7	5.3e-42
WP_021195268.1|2303713_2304238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021195269.1|2304230_2304722_+	DUF1643 domain-containing protein	NA	F4YXR6	Roseobacter_phage	45.8	6.5e-27
2305045:2305066	attR	TCGATCCCGGCCTCGGGCACCA	NA	NA	NA	NA
>prophage 1
NZ_CP012606	Ralstonia insidiosa strain FC1138 chromosome 2, complete sequence	1968926	526076	547589	1968926	integrase,transposase	Escherichia_phage(33.33%)	19	523284:523300	551224:551240
523284:523300	attL	GCGCTGGCCGCCAGCGA	NA	NA	NA	NA
WP_064496285.1|526076_527603_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.1	9.7e-13
WP_167351980.1|527586_528360_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_152524505.1|528478_529629_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	62.3	4.5e-95
WP_011517431.1|529809_531018_+|transposase	IS4-like element ISBvi1 family transposase	transposase	NA	NA	NA	NA
WP_064496287.1|531575_532424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021197718.1|532477_532636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152524506.1|532704_533025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052027489.1|533244_533649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021197721.1|533882_535292_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_021197722.1|535371_535695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081659383.1|535589_535961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152524507.1|536409_537531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021197724.1|537765_539613_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_021197725.1|539609_541373_+	AAA family ATPase	NA	A0A068EQC7	Bacillus_phage	34.0	5.2e-10
WP_021197726.1|541456_541735_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_021197727.1|541731_541923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021197730.1|543699_543936_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031330269.1|544837_546076_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_021197732.1|546011_547589_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
551224:551240	attR	GCGCTGGCCGCCAGCGA	NA	NA	NA	NA
>prophage 2
NZ_CP012606	Ralstonia insidiosa strain FC1138 chromosome 2, complete sequence	1968926	877713	914038	1968926	plate,transposase	Escherichia_phage(50.0%)	25	NA	NA
WP_012760797.1|877713_879240_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.1	9.7e-13
WP_152524425.1|879741_880770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152524424.1|881465_882242_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_052027469.1|882291_883086_-	DUF746 domain-containing protein	NA	NA	NA	NA	NA
WP_152524423.1|883394_884162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152524427.1|884326_884848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031329030.1|885450_885987_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_152524426.1|885983_887789_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_031329028.1|887839_891388_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_021193820.1|891368_892700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031329027.1|892702_892966_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_021193818.1|892977_893448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021193817.1|893444_895877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021193815.1|898377_898911_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_021193814.1|898924_900013_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_021193813.1|900009_901824_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_031329024.1|901835_903419_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_021193811.1|903693_905229_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_021193810.1|905301_905814_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_021193809.1|906317_907670_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_031329023.1|907768_908416_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_021193807.1|908520_910155_+	OmpA family protein	NA	NA	NA	NA	NA
WP_021193806.1|910250_910736_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_021193805.1|910887_913602_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.4	1.5e-93
WP_031329021.1|913612_914038_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 3
NZ_CP012606	Ralstonia insidiosa strain FC1138 chromosome 2, complete sequence	1968926	1202431	1221288	1968926	plate,transposase	Shigella_phage(50.0%)	12	NA	NA
WP_021193545.1|1202431_1203535_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_021193544.1|1203498_1205349_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_021193543.1|1205413_1205887_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_021193541.1|1206581_1208066_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_021193540.1|1208058_1208571_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_031328901.1|1209584_1210265_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_021193536.1|1210292_1211639_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_021193535.1|1211635_1212427_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_021193533.1|1215319_1217053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021193532.1|1217068_1218160_+	DUF1911 domain-containing protein	NA	NA	NA	NA	NA
WP_104656273.1|1218447_1219407_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	35.6	3.2e-30
WP_012760797.1|1219761_1221288_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.1	9.7e-13
