The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011484	Helicobacter pylori strain CC33C, complete genome	1659899	228703	238711	1659899	tRNA	Streptococcus_phage(42.86%)	9	NA	NA
WP_064436256.1|228703_229948_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	29.4	6.0e-29
WP_064436257.1|229934_230705_+	hypothetical protein	NA	S0A2X1	Cellulophaga_phage	48.5	6.1e-56
WP_064436258.1|230679_232023_+	McrB family protein	NA	M1NSM1	Streptococcus_phage	42.0	1.2e-86
WP_064436259.1|232015_233236_+	LlaJI family restriction endonuclease	NA	Q6DMW8	Streptococcus_phage	36.1	5.1e-65
WP_064436260.1|233309_234332_-	pseudaminic acid synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	34.1	4.5e-30
WP_000588246.1|234334_234976_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.7	6.7e-16
WP_033776981.1|234978_236250_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_080230845.1|236500_237196_+	CvpA family protein	NA	NA	NA	NA	NA
WP_064436261.1|237205_238711_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	40.1	7.9e-92
>prophage 2
NZ_CP011484	Helicobacter pylori strain CC33C, complete genome	1659899	674026	682294	1659899	tRNA	Synechococcus_phage(33.33%)	7	NA	NA
WP_064436485.1|674026_675997_-	DNA ligase (NAD(+)) LigA	NA	A0A0K2QQN8	Ralstonia_phage	33.4	4.5e-95
WP_064436486.1|676068_677010_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	28.9	2.4e-22
WP_064436487.1|677044_678778_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	21.4	2.4e-15
WP_064436488.1|678794_679370_+	adenylate kinase	NA	NA	NA	NA	NA
WP_064436489.1|679390_680389_+	glycosyltransferase family 25 protein	NA	A0A1D8KNF8	Synechococcus_phage	26.3	1.5e-09
WP_064436490.1|680446_681721_+	lipopolysaccharide biosynthesis protein	NA	A0A1D8KNF8	Synechococcus_phage	26.0	6.0e-08
WP_001047002.1|681772_682294_+	inorganic diphosphatase	NA	A0A1B1ISK6	uncultured_Mediterranean_phage	46.4	1.9e-37
>prophage 3
NZ_CP011484	Helicobacter pylori strain CC33C, complete genome	1659899	1566096	1656586	1659899	protease,transposase,tRNA	Helicobacter_phage(26.67%)	60	NA	NA
WP_064437006.1|1566096_1568859_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	26.6	5.4e-70
WP_033747649.1|1568875_1569790_+	type II/IV secretion system ATPase subunit	NA	NA	NA	NA	NA
WP_064437007.1|1569790_1571095_+	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_064437008.1|1571105_1571372_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_064437009.1|1571375_1572155_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_064437010.1|1572199_1573054_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
WP_064437011.1|1573035_1573872_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
WP_064437012.1|1573881_1574985_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_080471298.1|1574985_1575882_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_064437014.1|1575889_1576231_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_000187324.1|1576289_1576736_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	58.0	1.8e-39
WP_080471299.1|1580033_1581770_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_064437016.1|1585964_1586843_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_001155611.1|1586842_1587691_-	biotin synthase	NA	NA	NA	NA	NA
WP_080471330.1|1587816_1590429_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_064437018.1|1590422_1592219_+	site-specific DNA-methyltransferase	NA	A0A1B0XWD0	Campylobacter_phage	45.2	1.0e-69
WP_080471331.1|1592667_1593345_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_064437020.1|1593674_1594502_-	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_064437021.1|1594503_1596993_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	38.2	1.2e-137
WP_001237295.1|1597035_1597698_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_064437022.1|1597688_1597889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033599814.1|1598110_1598500_+	flagellar assembly protein FliW	NA	NA	NA	NA	NA
WP_064437023.1|1598682_1599162_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_064437024.1|1599164_1599977_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_064437025.1|1599978_1601325_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	47.8	2.4e-108
WP_000577745.1|1601367_1602411_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_064437026.1|1602414_1603161_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_064437027.1|1603215_1606119_-	restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_064437028.1|1606129_1608589_-	site-specific DNA-methyltransferase	NA	A0A2R3ZYF2	Campylobacter_phage	35.9	1.5e-42
WP_064437029.1|1608836_1610114_+	DUF1887 family protein	NA	A0A0B5IWU9	Pandoravirus	31.4	5.6e-14
WP_080471301.1|1610782_1611469_-	DNA cytosine methyltransferase	NA	A7XXH6	Thermus_virus	28.3	3.0e-14
WP_080471302.1|1614118_1614547_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	96.2	1.4e-70
WP_080471303.1|1614545_1615616_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.3	5.3e-191
WP_064437034.1|1616941_1618270_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_064437035.1|1618362_1619646_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RG77	Helicobacter_phage	95.1	6.6e-196
WP_064437036.1|1619715_1620144_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RG71	Helicobacter_phage	97.9	1.9e-75
WP_064437037.1|1620227_1621133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000394655.1|1622480_1622765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064437038.1|1622843_1623500_-	ParA family protein	NA	A2I303	Vibrio_virus	22.9	9.3e-05
WP_080471304.1|1626782_1627046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080471305.1|1629095_1629611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033602074.1|1631422_1632559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064437041.1|1632555_1634211_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_064437042.1|1637644_1638622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001278752.1|1638638_1638914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064437043.1|1638918_1639863_+	conjugal transfer protein TrbB	NA	NA	NA	NA	NA
WP_064437044.1|1639859_1640378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064437045.1|1640374_1642618_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_064437046.1|1642638_1644699_+	type IA DNA topoisomerase	NA	A0A1V0SB35	Catovirus	28.9	1.6e-58
WP_001955992.1|1644738_1645224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064437047.1|1645193_1645997_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_064437048.1|1646070_1646736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000365702.1|1646713_1647091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000150803.1|1647137_1647806_-	ParA family protein	NA	A0A222YXS3	Escherichia_phage	33.5	9.1e-24
WP_064437049.1|1648606_1649659_+	DUF1738 domain-containing protein	NA	NA	NA	NA	NA
WP_064437050.1|1649658_1651695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000120427.1|1651704_1653138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064437051.1|1653134_1654397_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_064437052.1|1654393_1655518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033600270.1|1655569_1656586_+|transposase	IS1595-like element ISHp1 family transposase	transposase	NA	NA	NA	NA
