The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	1137611	1150713	4678597	portal,protease,tail,capsid,head	Paracoccus_phage(25.0%)	14	NA	NA
WP_064329500.1|1137611_1138748_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	37.5	4.6e-60
WP_064329501.1|1139128_1139437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133033157.1|1139585_1140143_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	42.5	1.8e-25
WP_064329502.1|1140215_1141460_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	44.4	4.7e-82
WP_064329503.1|1141609_1142179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064329504.1|1142178_1142517_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_064329505.1|1142513_1142921_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_064329506.1|1142948_1143356_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_084437808.1|1143288_1143918_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_064329508.1|1143921_1144455_+|tail	phage tail tape measure protein	tail	D6PFD6	uncultured_phage	30.9	8.9e-06
WP_064329509.1|1144764_1145400_+	DUF2460 domain-containing protein	NA	A0A0K1Y6G4	Rhodobacter_phage	47.2	2.1e-41
WP_064329510.1|1145396_1146287_+	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	46.6	1.2e-63
WP_084438282.1|1146288_1146864_+	peptidase P60	NA	A0A1V0DYB6	Dinoroseobacter_phage	50.0	7.1e-33
WP_064329512.1|1146867_1150713_+	hypothetical protein	NA	A0A0K1LL82	Rhodobacter_phage	39.9	5.0e-223
>prophage 2
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	1415192	1425125	4678597	protease	Diachasmimorpha_longicaudata_entomopoxvirus(16.67%)	6	NA	NA
WP_168168947.1|1415192_1416944_-	gamma-glutamyltransferase	NA	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	23.5	5.9e-06
WP_064329746.1|1417221_1417854_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	60.7	5.5e-63
WP_064329747.1|1418142_1419420_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.4	4.6e-133
WP_064329748.1|1419834_1422258_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	46.8	9.8e-193
WP_023516583.1|1422463_1422739_+	HU family DNA-binding protein	NA	A0A172Q061	Acinetobacter_phage	35.2	1.0e-05
WP_064329749.1|1422929_1425125_+	esterase-like activity of phytase family protein	NA	E3SJA5	Synechococcus_phage	41.6	4.4e-83
>prophage 3
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	1626191	1694778	4678597	transposase,tRNA,integrase	uncultured_Mediterranean_phage(43.48%)	58	1617583:1617601	1705457:1705475
1617583:1617601	attL	GCCCCCGGGGCGGCTTTTC	NA	NA	NA	NA
WP_064332486.1|1626191_1627952_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_064329915.1|1628015_1631339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064329916.1|1631465_1632485_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	1.2e-22
WP_064329917.1|1632597_1633407_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.9	2.6e-33
WP_084437839.1|1633381_1634113_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	43.9	2.4e-38
WP_064329918.1|1634275_1635379_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	32.3	4.3e-10
WP_023511864.1|1635421_1635619_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	1.6e-08
WP_064329919.1|1635669_1636299_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_064329920.1|1636295_1637132_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.9	4.5e-44
WP_064329921.1|1637201_1638485_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.7	1.8e-100
WP_064329922.1|1638504_1639275_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.8	3.0e-26
WP_064329923.1|1639271_1639928_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	36.6	5.3e-16
WP_064329924.1|1640188_1640818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064329925.1|1640969_1642550_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	33.3	4.8e-15
WP_064329926.1|1642878_1643748_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_064329927.1|1643931_1644264_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	36.5	9.8e-11
WP_064332488.1|1644352_1646860_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	38.8	4.9e-38
WP_064329928.1|1646852_1647239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064332489.1|1647303_1648116_+	phytoene/squalene synthase family protein	NA	NA	NA	NA	NA
WP_064329929.1|1648230_1648683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064329930.1|1648891_1650301_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_023511883.1|1650444_1650588_-	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_064496054.1|1650931_1651075_-	DUF1127 domain-containing protein	NA	A0A0F6YPC3	Sinorhizobium_phage	54.5	6.2e-07
WP_064329931.1|1652179_1653283_+	DUF2157 domain-containing protein	NA	NA	NA	NA	NA
WP_064329932.1|1653285_1653876_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_064329933.1|1654366_1655845_+	trigger factor	NA	NA	NA	NA	NA
WP_064329934.1|1656554_1658090_-	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	31.6	2.2e-20
WP_064329935.1|1658362_1658926_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_084438292.1|1658970_1659612_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_064329937.1|1659678_1660167_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_064329938.1|1660194_1660569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064329939.1|1660570_1661443_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_064329940.1|1661608_1662412_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_064329941.1|1662505_1663912_-	Si-specific NAD(P)(+) transhydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.4	1.1e-39
WP_064329942.1|1664474_1666157_-	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
WP_064329943.1|1666464_1667676_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	50.1	8.0e-95
WP_064329944.1|1667676_1670160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084437849.1|1670569_1671202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084438294.1|1671396_1672143_+	recombinase family protein	NA	Q6DMS6	Streptococcus_phage	25.0	8.1e-05
WP_145925838.1|1672210_1673429_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	53.9	2.2e-76
WP_145926002.1|1674243_1675116_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_064329947.1|1675108_1676044_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_064329948.1|1676367_1677159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064329949.1|1677145_1678063_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_064329950.1|1678221_1679154_+	restriction endonuclease	NA	A0A1S6KZY3	Salmonella_phage	45.7	3.7e-07
WP_064329951.1|1679193_1680120_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_060583174.1|1682009_1683509_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_003501246.1|1683510_1684245_+	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	31.2	1.5e-32
WP_168168897.1|1685622_1685991_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_064329397.1|1685987_1686341_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_064329396.1|1686403_1688056_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.0	2.1e-82
WP_064329955.1|1689237_1690197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064329956.1|1690193_1691459_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
WP_064329957.1|1691483_1692266_-	DUF5131 family protein	NA	A0A2P1A0W3	Gordonia_phage	45.9	1.1e-49
WP_084437855.1|1692317_1692695_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_064329958.1|1692699_1693065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064329959.1|1693108_1693528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064329960.1|1693524_1694778_-|integrase	site-specific integrase	integrase	A0A248SL35	Klebsiella_phage	67.8	5.5e-163
1705457:1705475	attR	GAAAAGCCGCCCCGGGGGC	NA	NA	NA	NA
>prophage 4
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	1816708	1827330	4678597		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_064330053.1|1816708_1819627_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.4	0.0e+00
WP_064330054.1|1819919_1820426_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	61.8	6.2e-49
WP_064330055.1|1820503_1820911_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_064330056.1|1821223_1821853_-	MarC family protein	NA	NA	NA	NA	NA
WP_064330057.1|1822095_1824876_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.2	1.9e-75
WP_162853123.1|1825099_1825246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330058.1|1825634_1826129_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	38.2	9.4e-26
WP_064330059.1|1826162_1826732_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.0	8.3e-42
WP_064330060.1|1826814_1827330_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	57.5	4.2e-45
>prophage 5
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	2396951	2419665	4678597	tail,integrase,transposase	Ochrobactrum_phage(45.0%)	33	2400593:2400611	2418218:2418236
WP_064332558.1|2396951_2398439_-|tail	phage tail protein	tail	A0A2I7S9H0	Vibrio_phage	27.7	2.8e-49
WP_064330526.1|2398441_2398627_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_064330528.1|2399237_2399672_-	DUF1320 domain-containing protein	NA	B7SDP4	Haemophilus_phage	36.0	4.4e-11
WP_064330529.1|2399848_2400271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330530.1|2400383_2401277_-	hypothetical protein	NA	J9SVY7	Pseudomonas_phage	45.3	2.0e-74
2400593:2400611	attL	CGTCGAGCGTGGCCTTGGA	NA	NA	NA	NA
WP_064330531.1|2401288_2401678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064332559.1|2401679_2402717_-	hypothetical protein	NA	M4SNT6	Rhodobacter_phage	36.0	2.7e-38
WP_064330532.1|2402780_2403287_-	phage virion morphogenesis protein	NA	A0A2K9VH22	Faecalibacterium_phage	35.8	6.9e-16
WP_064330533.1|2403283_2404366_-	hypothetical protein	NA	J9STS2	Pseudomonas_phage	46.6	6.8e-53
WP_064330534.1|2404484_2406110_-	DUF935 domain-containing protein	NA	M4SPR8	Rhodobacter_phage	43.6	7.0e-110
WP_064330535.1|2406109_2407765_-	hypothetical protein	NA	A0A219VH72	Ochrobactrum_phage	73.9	2.7e-218
WP_064330536.1|2407757_2408399_-	DUF3486 family protein	NA	A0A219VH75	Ochrobactrum_phage	49.0	6.9e-45
WP_064330537.1|2408405_2408717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330538.1|2408727_2409030_-	DUF2730 family protein	NA	A0A219VHD8	Ochrobactrum_phage	27.1	5.0e-06
WP_064330539.1|2409243_2409609_-	hypothetical protein	NA	A0A068CE23	Rhizobium_phage	42.6	6.3e-11
WP_064330540.1|2409605_2409863_-	hypothetical protein	NA	A0A219VHD7	Ochrobactrum_phage	50.7	4.1e-09
WP_064332560.1|2409866_2410598_-	TIGR02594 family protein	NA	R9TRQ2	Rhizobium_phage	38.2	4.5e-32
WP_064330541.1|2410684_2411071_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_064330542.1|2411089_2411299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330543.1|2411295_2411946_-	regulatory protein GemA	NA	NA	NA	NA	NA
WP_084437931.1|2411942_2412191_-	hypothetical protein	NA	R9U2R5	Rhizobium_phage	47.1	3.0e-12
WP_145925909.1|2412187_2412469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330545.1|2412468_2412702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330546.1|2412691_2413066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330547.1|2413055_2413322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330548.1|2413333_2413993_-	DUF3164 family protein	NA	A0A1B0T6L8	Pelagibaca_phage	50.2	2.6e-55
WP_064330549.1|2414005_2414527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330550.1|2414523_2414829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330551.1|2414828_2415851_-	AAA family ATPase	NA	A0A219VHC7	Ochrobactrum_phage	42.9	1.2e-62
WP_145925910.1|2415936_2417976_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A219VHD4	Ochrobactrum_phage	51.7	2.9e-129
WP_064330552.1|2417972_2418434_-	hypothetical protein	NA	A0A219VHC5	Ochrobactrum_phage	66.0	2.3e-50
2418218:2418236	attR	CGTCGAGCGTGGCCTTGGA	NA	NA	NA	NA
WP_064330553.1|2418430_2419294_-	ParB N-terminal domain-containing protein	NA	A0A219VHB6	Ochrobactrum_phage	45.9	2.1e-52
WP_064330554.1|2419293_2419665_-	hypothetical protein	NA	A0A219VHC3	Ochrobactrum_phage	43.3	2.2e-19
>prophage 6
NZ_CP015736	Shinella sp. HZN7 chromosome, complete genome	4678597	2828332	2868267	4678597	tail,integrase,transposase,plate,terminase	Rhizobium_phage(76.32%)	54	2818448:2818465	2872281:2872298
2818448:2818465	attL	CCGCCATGGCGGCCGGCG	NA	NA	NA	NA
WP_084437990.1|2828332_2829241_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067XRF8	Caulobacter_phage	48.7	2.7e-63
WP_064332593.1|2829295_2829772_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_145925923.1|2830007_2830232_-	hypothetical protein	NA	R9U2V1	Rhizobium_phage	63.4	4.7e-17
WP_064330888.1|2830362_2830680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330889.1|2830722_2831010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330891.1|2833652_2834093_-	hypothetical protein	NA	A0A291L9V2	Bordetella_phage	45.6	3.5e-24
WP_084437992.1|2834098_2835214_-	hypothetical protein	NA	R9U468	Rhizobium_phage	49.7	1.8e-40
WP_084437994.1|2835206_2836343_-|plate	phage baseplate assembly protein	plate	R9U1E3	Rhizobium_phage	66.4	8.0e-129
WP_064332595.1|2836335_2836743_-	hypothetical protein	NA	R9U2U6	Rhizobium_phage	71.1	7.2e-56
WP_064330894.1|2837340_2838339_-	late control protein D	NA	R9U464	Rhizobium_phage	69.3	3.3e-126
WP_064330895.1|2838338_2838530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330896.1|2838531_2838801_-	hypothetical protein	NA	R9U1D8	Rhizobium_phage	73.9	3.3e-33
WP_064330897.1|2838797_2839274_-	hypothetical protein	NA	R9U2U2	Rhizobium_phage	62.0	1.2e-49
WP_064330898.1|2839270_2841862_-	tape measure protein	NA	R9U4C6	Rhizobium_phage	50.9	7.7e-111
WP_064330899.1|2842101_2842437_-	hypothetical protein	NA	R9U460	Rhizobium_phage	66.4	4.1e-33
WP_064330900.1|2842518_2842827_-	hypothetical protein	NA	R9U1D3	Rhizobium_phage	33.3	1.8e-06
WP_064330901.1|2842867_2843374_-|tail	phage tail protein	tail	R9U2T4	Rhizobium_phage	58.4	5.2e-56
WP_064330902.1|2843388_2844657_-|tail	phage tail protein	tail	R9U4C2	Rhizobium_phage	76.8	2.3e-185
WP_064330903.1|2844660_2844879_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145925924.1|2844890_2845400_-	hypothetical protein	NA	R9U453	Rhizobium_phage	66.5	3.8e-54
WP_064330905.1|2845387_2845855_-	DUF1320 family protein	NA	R9U1C9	Rhizobium_phage	76.3	6.5e-61
WP_064330906.1|2845937_2846357_-	hypothetical protein	NA	R9U2T2	Rhizobium_phage	57.6	8.3e-07
WP_064330907.1|2846370_2847324_-	hypothetical protein	NA	R9U4B8	Rhizobium_phage	78.0	1.4e-142
WP_064330908.1|2847335_2847671_-	DUF2190 family protein	NA	R9U0T4	Rhizobium_phage	64.9	1.0e-28
WP_064330909.1|2847685_2848807_-	hypothetical protein	NA	R9U448	Rhizobium_phage	65.1	8.4e-131
WP_064330910.1|2849082_2849547_-	phage virion morphogenesis protein	NA	R9U1C4	Rhizobium_phage	63.2	5.0e-45
WP_084437998.1|2849649_2852508_-	DUF935 family protein	NA	R9U2S4	Rhizobium_phage	79.6	4.1e-230
WP_064330911.1|2852582_2854238_-|terminase	phage terminase large subunit	terminase	R9U0T3	Rhizobium_phage	82.1	3.0e-270
WP_064330912.1|2854234_2854738_-	DUF1804 family protein	NA	R9U444	Rhizobium_phage	89.2	2.2e-75
WP_064330913.1|2854727_2854973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168168909.1|2854969_2855134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330914.1|2855171_2855519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168168952.1|2855515_2856004_-	hypothetical protein	NA	F8TUT3	EBPR_podovirus	36.0	1.3e-11
WP_064330916.1|2856646_2857021_-	hypothetical protein	NA	F8TVB5	EBPR_siphovirus	51.7	6.4e-27
WP_064330917.1|2857017_2857464_-	regulatory protein GemA	NA	R9U1B6	Rhizobium_phage	68.3	6.5e-50
WP_145925926.1|2857460_2857745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145925927.1|2857737_2857995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330919.1|2857991_2858447_-	hypothetical protein	NA	R9U4A4	Rhizobium_phage	64.2	2.6e-46
WP_064330920.1|2858443_2858917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145925928.1|2858913_2859414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084438000.1|2859370_2860120_-	DUF3164 family protein	NA	A0A1B0T6L8	Pelagibaca_phage	38.4	1.7e-39
WP_064330922.1|2860140_2860389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330923.1|2860385_2860604_-	hypothetical protein	NA	R9U2R2	Rhizobium_phage	58.5	2.4e-10
WP_064330924.1|2860593_2860986_-	hypothetical protein	NA	G8GWC3	Rhodobacter_phage	55.3	5.9e-31
WP_145925929.1|2860970_2861570_-	hypothetical protein	NA	G8GWC2	Rhodobacter_phage	44.0	2.2e-37
WP_064330925.1|2861566_2862334_-	ATP-binding protein	NA	G8GWC1	Rhodobacter_phage	66.9	5.1e-95
WP_064330926.1|2862360_2864631_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	R9U1A8	Rhizobium_phage	72.3	0.0e+00
WP_064330927.1|2864627_2865095_-	hypothetical protein	NA	R9U2Q7	Rhizobium_phage	78.7	5.3e-63
WP_064330928.1|2865097_2866081_-	ParB N-terminal domain-containing protein	NA	R9U496	Rhizobium_phage	66.1	3.4e-112
WP_064330929.1|2866206_2866833_-	hypothetical protein	NA	R9U0S2	Rhizobium_phage	33.7	1.9e-15
WP_168168910.1|2866829_2866982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330930.1|2866978_2867287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064330931.1|2867283_2867586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145925930.1|2867739_2868267_+	helix-turn-helix domain-containing protein	NA	G8GWB1	Rhodobacter_phage	31.3	1.1e-11
2872281:2872298	attR	CCGCCATGGCGGCCGGCG	NA	NA	NA	NA
>prophage 1
NZ_CP015741	Shinella sp. HZN7 plasmid pShin-05, complete sequence	155026	773	63147	155026	transposase,integrase	Stx2-converting_phage(12.5%)	57	29094:29108	63060:63074
WP_145926104.1|773_1719_+|transposase	IS630 family transposase	transposase	A0A2P0VP61	Tetraselmis_virus	21.8	5.3e-09
WP_084438671.1|1867_2416_+	YqhA family protein	NA	K4K6D8	Caulobacter_phage	31.8	1.3e-12
WP_064334242.1|3928_5290_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_064334243.1|5509_5758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168168996.1|5769_7155_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_064334245.1|7235_8900_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA	NA
WP_145926105.1|9011_9362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334246.1|9460_10390_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_024899813.1|10467_11217_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_084438673.1|11523_12873_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.6	1.1e-47
WP_024899816.1|13319_14495_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_168169004.1|14508_15417_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_064334247.1|15539_15917_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_024899819.1|16019_18035_+	6-hydroxypseudooxynicotine oxidase	NA	NA	NA	NA	NA
WP_064334248.1|18229_18523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334249.1|18725_19397_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_168168997.1|19808_20947_-|transposase	IS3 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	31.9	9.4e-21
WP_064334251.1|21089_23300_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.5	1.7e-13
WP_024899825.1|24194_25229_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_064334252.1|27090_28167_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_064334253.1|28560_29241_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
29094:29108	attL	TGGCAATATCGCGCA	NA	NA	NA	NA
WP_064334254.1|29416_30451_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_024899989.1|30482_31283_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_024899990.1|31275_32181_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	26.1	4.6e-10
WP_024899991.1|32183_33257_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.7	1.3e-27
WP_024899992.1|33433_34066_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_064334255.1|34127_35156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024899994.1|35182_35965_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_145926120.1|35977_36679_-	Asp/Glu racemase	NA	NA	NA	NA	NA
WP_024899996.1|37265_37673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024899997.1|37956_39354_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_064334256.1|39383_40697_+	FAD-dependent oxidoreductase	NA	A0A2K9L3H9	Tupanvirus	21.8	6.4e-13
WP_084438674.1|40803_41010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064334257.1|41011_42667_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	46.5	2.9e-103
WP_064334258.1|42712_43060_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	61.7	6.4e-37
WP_037407864.1|43056_43467_-	IS66 family insertion sequence hypothetical protein	NA	A0A1B0YZU7	Pseudomonas_phage	41.9	7.6e-05
WP_084438675.1|43541_43733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084438676.1|43882_46132_-	nicotine dehydrogenase subunit alpha NdhA	NA	NA	NA	NA	NA
WP_024900002.1|46128_46596_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	29.5	4.0e-10
WP_145926109.1|46879_47548_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334260.1|47710_48613_-	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_024900006.1|48699_49098_-	DoxX family protein	NA	NA	NA	NA	NA
WP_024900007.1|49129_49510_-	glutathione S-transferase domain-containing protein	NA	NA	NA	NA	NA
WP_035209847.1|50509_51424_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334261.1|51808_52621_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	37.7	8.2e-35
WP_145926110.1|52610_54137_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	26.1	8.8e-22
WP_064334262.1|54187_54445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334263.1|54444_54915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334264.1|55002_56151_-	DUF1612 and helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_064334265.1|56165_57827_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_064334266.1|58169_58601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064334267.1|58587_58866_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_064334268.1|58943_60107_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_064334269.1|60129_60441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145926111.1|60528_60780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035089229.1|60841_61597_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	46.1	2.3e-55
WP_064332397.1|61611_63147_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	43.6	8.0e-116
63060:63074	attR	TGGCAATATCGCGCA	NA	NA	NA	NA
>prophage 1
NZ_CP015742	Shinella sp. HZN7 plasmid pShin-06, complete sequence	147896	71372	134019	147896	transposase	Salmonella_phage(15.38%)	50	NA	NA
WP_145926128.1|71372_71627_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	52.8	1.1e-14
WP_064334419.1|71751_73950_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_064334420.1|73954_74905_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_064334421.1|74901_75534_-	aldehyde dehydrogenase iron-sulfur subunit	NA	A0A0P0IVM8	Acinetobacter_phage	35.8	2.2e-19
WP_064334422.1|75601_76096_-	DUF305 domain-containing protein	NA	A0A1V0SJW0	Klosneuvirus	30.2	4.1e-05
WP_064334423.1|76409_78023_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.4	3.2e-22
WP_064334424.1|78271_78874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334425.1|78851_79859_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_064334426.1|80231_81686_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_084438697.1|81996_82449_-	response regulator	NA	NA	NA	NA	NA
WP_064334427.1|82687_83323_-	DUF1109 family protein	NA	NA	NA	NA	NA
WP_064334428.1|83324_83879_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_064334429.1|84105_84387_+	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_064334430.1|84452_85307_+	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_064334431.1|85310_86087_+	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_145926129.1|86058_86532_+	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_064334433.1|86755_88123_+	chloride channel protein	NA	NA	NA	NA	NA
WP_064334434.1|88285_89770_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	65.9	2.1e-169
WP_064334435.1|90090_90351_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_064334436.1|90360_92127_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_064334437.1|92208_94035_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_064334438.1|94046_94577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334439.1|94580_96266_+	3'-5' exonuclease	NA	A0A1X9SH08	Bradyrhizobium_phage	36.5	3.2e-17
WP_064334440.1|96722_97679_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_064334441.1|97756_99862_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_064334442.1|99858_100257_+	DUF1850 domain-containing protein	NA	NA	NA	NA	NA
WP_064334443.1|100343_102158_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_064334444.1|102154_103516_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334445.1|103576_104860_+	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
WP_064334476.1|104950_106108_+	osmoprotectant NAGGN system M42 family peptidase	NA	NA	NA	NA	NA
WP_064334446.1|106208_107786_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_064334447.1|107816_108764_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_064334448.1|108792_110550_+	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.3e-26
WP_064334449.1|110546_111344_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	2.4e-15
WP_064334450.1|111340_112123_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334451.1|112243_114019_+	N-acetylglutaminylglutamine amidotransferase	NA	F2Y1H0	Organic_Lake_phycodnavirus	26.6	2.4e-31
WP_064334452.1|114020_115808_+	N-acetylglutaminylglutamine synthetase	NA	NA	NA	NA	NA
WP_064334477.1|115814_118022_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_145926130.1|118160_118475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334453.1|118734_119634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084438707.1|121578_121848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145926060.1|122057_123270_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	48.8	1.2e-66
WP_145926131.1|124327_124453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084438708.1|124662_125214_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_145925838.1|125638_126858_-|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	53.9	2.2e-76
WP_050746605.1|126934_127963_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_064334456.1|128104_129661_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_064334457.1|130127_130316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334458.1|130295_130889_-	recombinase family protein	NA	A0A219Y912	Aeromonas_phage	34.6	2.9e-21
WP_064334459.1|131043_134019_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.7	2.0e-187
>prophage 1
NZ_CP015743	Shinella sp. HZN7 plasmid pShin-07, complete sequence	132822	113907	125379	132822	transposase	Stx2-converting_phage(25.0%)	11	NA	NA
WP_050746970.1|113907_115263_+	MBL fold metallo-hydrolase	NA	Q331V3	Clostridium_botulinum_C_phage	30.3	4.7e-19
WP_082342933.1|115304_116777_+	thymidine phosphorylase family protein	NA	A0A0H3UZD4	Geobacillus_virus	25.4	1.9e-21
WP_064334523.1|117343_117766_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_050746938.1|117762_118107_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	56.6	2.7e-32
WP_050746941.1|118154_119807_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	42.1	1.9e-91
WP_050746939.1|119809_120394_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	31.6	2.5e-17
WP_168169015.1|120401_120701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050746940.1|120747_121629_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	46.3	6.1e-52
WP_050746942.1|121625_122885_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	36.6	1.0e-44
WP_084438720.1|123231_123780_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_050747148.1|124038_125379_-|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	28.3	1.1e-31
>prophage 1
NZ_CP015745	Shinella sp. HZN7 plasmid pShin-09, complete sequence	127666	50939	107011	127666	transposase	Lactococcus_phage(23.08%)	41	NA	NA
WP_064334688.1|50939_52436_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_064334689.1|52432_53191_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	39.7	8.4e-42
WP_064334693.1|59316_59883_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_064334694.1|60241_60934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334695.1|60936_62607_+	hypothetical protein	NA	A0A0P0CRP3	Ostreococcus_lucimarinus_virus	27.9	8.9e-36
WP_145926147.1|63521_64061_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_064334696.1|64441_64621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064334697.1|64613_66680_+	recombinase family protein	NA	A0A1B2LRQ3	Wolbachia_phage	25.4	1.3e-07
WP_084438738.1|66986_68543_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_064334699.1|68523_69684_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_064334700.1|69676_70132_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334458.1|70438_71032_-	recombinase family protein	NA	A0A219Y912	Aeromonas_phage	34.6	2.9e-21
WP_064334459.1|71186_74162_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.7	2.0e-187
WP_064334701.1|74801_75461_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_064334702.1|76136_77351_-	replication initiation protein RepC	NA	L7TKN6	Rhizobium_phage	28.2	2.1e-18
WP_064334703.1|77506_78529_-	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	36.4	3.1e-47
WP_064334742.1|78525_79740_-	plasmid partitioning protein RepA	NA	A0A240F4U1	Ochrobactrum_phage	54.5	1.2e-117
WP_064334704.1|80128_80752_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_064334705.1|80764_81742_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_064334706.1|81731_82115_+	conjugal transfer protein TrbC	NA	NA	NA	NA	NA
WP_064334707.1|82107_82407_+	conjugal transfer protein TrbD	NA	NA	NA	NA	NA
WP_064334708.1|82416_84873_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_064334709.1|84844_85648_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_064334710.1|85641_85818_+	entry exclusion protein TrbK	NA	NA	NA	NA	NA
WP_064334711.1|85822_87001_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_064334712.1|87025_87688_+	conjugal transfer protein TrbF	NA	NA	NA	NA	NA
WP_064334713.1|87705_88518_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA	NA
WP_064334714.1|88521_88959_+	conjugal transfer protein TrbH	NA	NA	NA	NA	NA
WP_064328977.1|89889_90648_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	40.5	2.9e-42
WP_064328978.1|90644_92141_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	25.2	1.1e-13
WP_064334717.1|93554_94652_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_064334718.1|94980_95409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084438739.1|95457_96261_+	DUF1403 family protein	NA	NA	NA	NA	NA
WP_064334719.1|96601_97627_-	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	32.2	1.4e-39
WP_064334720.1|97638_98550_-	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	35.1	9.8e-37
WP_064334721.1|98566_99850_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_064334722.1|100445_101453_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_064334723.1|101669_103067_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_064334724.1|103113_103893_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064334689.1|104759_105518_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	39.7	8.4e-42
WP_064334688.1|105514_107011_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
