The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	264203	283235	1667096	head	Vibrio_phage(21.05%)	31	NA	NA
WP_064085142.1|264203_265121_+	AAA family ATPase	NA	A0A2I7S9C3	Vibrio_phage	44.3	1.2e-58
WP_010944153.1|265120_265354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064085143.1|265366_265984_+	DUF3164 family protein	NA	A4JWM8	Burkholderia_virus	56.9	1.8e-66
WP_041603325.1|265994_266213_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010944158.1|266607_266826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944159.1|266828_267032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944160.1|267028_267364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944161.1|267372_267666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064083071.1|267667_268405_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	35.0	9.7e-27
WP_010944163.1|268404_268680_+	hypothetical protein	NA	A0A2P0P8L3	Salmonella_phage	49.3	1.6e-11
WP_010944164.1|268757_269228_+	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	43.2	1.1e-26
WP_064083073.1|269209_269578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064083074.1|269555_270020_+	regulatory protein GemA	NA	Q6QIE7	Burkholderia_phage	30.9	7.3e-12
WP_041603328.1|270016_270352_+	transcriptional regulator	NA	A0A2I7S9J0	Vibrio_phage	39.1	8.6e-07
WP_064083075.1|270428_270980_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.3	3.0e-73
WP_010944171.1|271212_271443_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	74.6	9.4e-21
WP_010944172.1|271445_271730_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_010944174.1|271849_272080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944175.1|272076_272412_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_041603330.1|272415_272715_+	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	54.1	1.2e-20
WP_010944177.1|272737_273307_+	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	46.4	5.9e-40
WP_088591959.1|273303_274866_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.5	1.6e-159
WP_064085144.1|274869_276474_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	49.7	3.9e-137
WP_010944180.1|277935_278379_+	phage virion morphogenesis protein	NA	G9BWH2	Planktothrix_phage	29.8	3.8e-10
WP_010944182.1|279621_280533_+|head	head protein	head	C9DGP2	Escherichia_phage	52.6	2.0e-82
WP_010944183.1|280607_280988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944184.1|280987_281407_+	DUF1320 domain-containing protein	NA	A0A0C4UR02	Shigella_phage	36.0	8.8e-17
WP_064083079.1|281406_281838_+	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	38.2	5.5e-22
WP_155727103.1|281731_282031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944186.1|282020_282761_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	50.6	1.6e-61
WP_010944187.1|282806_283235_+	hypothetical protein	NA	L7P7Y2	Pseudomonas_phage	40.5	3.7e-18
>prophage 2
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	570357	592898	1667096	head,tail	Haemophilus_phage(36.0%)	33	NA	NA
WP_010944491.1|570357_570564_+	hypothetical protein	NA	F6MII8	Haemophilus_phage	47.4	8.5e-05
WP_064083113.1|570550_570895_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	54.9	7.0e-20
WP_064085150.1|570905_571523_+	DUF3164 family protein	NA	A0A0M3LQ92	Mannheimia_phage	79.4	6.1e-91
WP_064085207.1|571606_571825_+	ANR family transcriptional regulator	NA	A0A0M3LSH0	Mannheimia_phage	58.1	1.4e-05
WP_010944495.1|571828_572008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944496.1|572026_572323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944497.1|572319_572523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050711635.1|572532_572802_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_041603379.1|572859_573426_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	73.4	4.5e-72
WP_010944500.1|573409_573838_+	regulatory protein GemA	NA	F6MIJ6	Haemophilus_phage	65.0	1.5e-43
WP_010944501.1|574151_574751_+	phage antirepressor Ant	NA	G9L6G1	Escherichia_phage	47.0	7.4e-25
WP_010944502.1|574761_574971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944503.1|575099_575522_+	hypothetical protein	NA	F6MIJ8	Haemophilus_phage	67.6	1.9e-51
WP_041603380.1|575609_576158_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	72.6	2.9e-76
WP_010944505.1|576162_576516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944506.1|576502_576736_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.0	4.7e-28
WP_010944507.1|576735_577125_+	DUF2681 domain-containing protein	NA	A0A0M3LP93	Mannheimia_phage	43.5	9.1e-16
WP_010944508.1|577173_577452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944509.1|577448_577703_+	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	54.8	2.4e-17
WP_010944510.1|577710_578211_+	DUF1804 family protein	NA	A0A0M3LQI8	Mannheimia_phage	90.4	8.5e-75
WP_064085151.1|579949_581587_+	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	79.3	1.3e-252
WP_010944513.1|581570_582881_+|head	head morphogenesis protein	head	B7SDN5	Haemophilus_phage	67.1	2.1e-165
WP_010944514.1|583013_583430_+	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	76.6	5.3e-54
WP_041603382.1|583684_584755_+	hypothetical protein	NA	B7SDN9	Haemophilus_phage	78.3	5.9e-150
WP_010944516.1|584754_585678_+|tail	tail sheath protein	tail	B7SDP1	Haemophilus_phage	82.8	4.6e-143
WP_010944517.1|585724_586012_+	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	70.0	1.9e-18
WP_010944518.1|586014_586401_+	DUF1320 domain-containing protein	NA	A0A2D1GNP0	Pseudomonas_phage	44.5	7.9e-20
WP_010944519.1|586397_586844_+	hypothetical protein	NA	A0A075CI80	Pseudomonas_phage	32.2	2.6e-14
WP_010944520.1|586874_587618_+	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.4	1.0e-60
WP_010944521.1|587675_588095_+	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	39.7	1.2e-21
WP_010944522.1|588271_588526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944523.1|588540_591900_+	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.4	1.0e-107
WP_010944524.1|591899_592898_+	hypothetical protein	NA	A0A125RND5	Pseudomonas_phage	30.9	2.9e-34
>prophage 3
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	607502	622760	1667096		Streptomyces_phage(14.29%)	11	NA	NA
WP_010944540.1|607502_610979_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.1	3.5e-191
WP_010944541.1|611090_612173_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010944542.1|612173_613277_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_010944544.1|613603_615103_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.7	8.0e-52
WP_010944545.1|615172_615802_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	33.6	2.2e-11
WP_064085154.1|615801_616224_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	37.0	4.7e-18
WP_010944547.1|616216_616891_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	47.7	3.2e-53
WP_010944550.1|617255_618167_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	48.1	1.1e-64
WP_010944551.1|618268_618556_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_010944552.1|618684_620112_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010944553.1|620189_622760_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	34.1	4.2e-125
>prophage 4
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	691829	702411	1667096		uncultured_Caudovirales_phage(28.57%)	10	NA	NA
WP_041603563.1|691829_692738_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	5.2e-22
WP_064083123.1|692749_694813_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	35.8	2.9e-44
WP_010945597.1|694840_695380_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.0	6.0e-26
WP_010945596.1|695585_696344_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	26.6	3.0e-15
WP_010945595.1|696340_697246_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010945594.1|697316_697652_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	56.8	1.0e-28
WP_010945593.1|697713_698379_-	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.8	1.8e-48
WP_041603561.1|698564_699116_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_064083124.1|699202_701041_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010945590.1|701118_702411_+	purine permease	NA	Q9KX94	Enterobacteria_phage	28.4	1.5e-22
>prophage 5
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	1238342	1244855	1667096		Staphylococcus_phage(50.0%)	7	NA	NA
WP_041603676.1|1238342_1239644_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	32.6	2.0e-30
WP_010945071.1|1239735_1240671_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.8	4.1e-38
WP_010945070.1|1240678_1241167_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010945068.1|1241254_1241716_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.1	8.7e-42
WP_010945067.1|1241825_1243031_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	8.5e-105
WP_010945066.1|1243086_1243734_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	8.0e-41
WP_010945065.1|1243748_1244855_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.7	3.7e-46
>prophage 6
NZ_CP015426	[Haemophilus] ducreyi strain VAN3, complete genome	1667096	1317803	1332847	1667096		uncultured_Mediterranean_phage(12.5%)	15	NA	NA
WP_010945007.1|1317803_1318313_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.4	2.5e-13
WP_010945006.1|1318416_1319655_+	multifunctional CCA addition/repair protein	NA	S5MVS8	Sinorhizobium_phage	46.0	1.6e-82
WP_010945005.1|1319667_1320477_+	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_041603474.1|1320515_1320710_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_010945003.1|1320709_1321051_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_064085185.1|1321062_1322916_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.8	2.8e-107
WP_010945001.1|1322967_1323600_-	DUF2625 family protein	NA	NA	NA	NA	NA
WP_010945000.1|1323644_1324166_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_010944999.1|1324174_1324498_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	9.8e-24
WP_010944998.1|1324631_1325015_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	75.8	1.7e-51
WP_064083187.1|1325062_1326283_-	IscS subfamily cysteine desulfurase	NA	A0A2K9L679	Tupanvirus	24.7	4.9e-15
WP_010944996.1|1326336_1326789_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041603472.1|1327216_1328554_+	membrane protein	NA	NA	NA	NA	NA
WP_010944993.1|1328617_1329175_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.1	3.8e-31
WP_010944992.1|1329250_1332847_-	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	21.5	1.0e-12
