The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	934773	942086	4679487	integrase,protease	Dickeya_phage(16.67%)	7	923511:923525	942304:942318
923511:923525	attL	AGCCTGCGAGGAGAC	NA	NA	NA	NA
WP_001201751.1|934773_935892_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125875.1|935888_937835_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_000447499.1|937964_938186_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|938509_938830_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934064.1|938860_941137_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_001117984.1|941349_941547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001539594.1|941708_942086_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
942304:942318	attR	GTCTCCTCGCAGGCT	NA	NA	NA	NA
>prophage 2
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	992545	1054063	4679487	tRNA,protease,tail	Escherichia_phage(18.75%)	53	NA	NA
WP_001154025.1|992545_993349_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|993341_994664_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060025.1|994644_995349_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572746.1|995348_999815_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925870.1|1000159_1002010_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|1002269_1002818_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|1002845_1003493_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|1003554_1004745_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|1004929_1006021_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117867.1|1006614_1008015_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000762342.1|1008215_1008677_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544855.1|1008994_1010209_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893200.1|1010454_1011891_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191404.1|1011968_1013171_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000274547.1|1013796_1014426_+	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	65.9	1.6e-75
WP_000729406.1|1014409_1015036_+	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	71.6	3.3e-92
WP_000583382.1|1015032_1016742_+|tail	tail fiber protein	tail	A0A0U2SAV1	Escherichia_phage	66.0	1.5e-91
WP_000143167.1|1016741_1017323_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_072100753.1|1017326_1017575_-|tail	tail fiber assembly protein	tail	A0A1B0VCD0	Salmonella_phage	66.2	2.1e-18
WP_001674638.1|1017800_1018769_+	SPI-2 type III secretion system effector SseI	NA	Q9MBL9	Phage_Gifsy-2	99.4	3.0e-193
WP_000334547.1|1019416_1020043_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_001525490.1|1020402_1021089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497441.1|1021359_1021551_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_000193790.1|1021977_1024590_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	6.3e-20
WP_000291723.1|1024797_1025808_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001574119.1|1025973_1026516_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224079.1|1026512_1027622_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086485.1|1027720_1029829_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|1029841_1031749_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333139.1|1031763_1033017_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433414.1|1033021_1034662_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|1034658_1035222_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1035477_1035645_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1035744_1036263_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156448.1|1036331_1038092_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1038277_1038730_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001674965.1|1038801_1039854_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288733.1|1040210_1040720_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1040936_1041542_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950876.1|1041528_1043682_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1043700_1044147_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420505.1|1044270_1046325_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
WP_000424187.1|1046360_1046819_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847719.1|1046913_1047576_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001676378.1|1047749_1048163_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1048207_1048525_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140478.1|1048582_1049794_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859416.1|1050008_1050557_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548080.1|1050582_1051362_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000072884.1|1051410_1051692_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904449.1|1051688_1052018_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|1052104_1052764_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000938186.1|1053382_1054063_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	2.2e-81
>prophage 3
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	1194259	1252310	4679487	holin,integrase,tail,lysis,tRNA	Salmonella_phage(22.22%)	59	1236859:1236876	1249003:1249020
WP_000569035.1|1194259_1195231_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_000019607.1|1195227_1195971_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	4.1e-25
WP_000252975.1|1196011_1196407_-	MAPEG family protein	NA	NA	NA	NA	NA
WP_000639226.1|1196459_1197278_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	80.3	4.5e-57
WP_000916144.1|1197274_1197841_-	hydrolase	NA	NA	NA	NA	NA
WP_001258629.1|1198165_1199938_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000653693.1|1200040_1200493_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_000907242.1|1200522_1201263_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000022509.1|1201299_1201821_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
WP_000716756.1|1201822_1202422_-	YebB family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001676480.1|1202630_1203323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000580335.1|1203682_1204294_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000568508.1|1204302_1205313_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	26.4	2.4e-07
WP_000571521.1|1205391_1206177_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
WP_000203023.1|1206173_1206929_-	zinc ABC transporter ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	8.5e-18
WP_000939597.1|1207007_1207952_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
WP_001184028.1|1207967_1209287_+	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
WP_000448401.1|1209403_1210375_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
WP_000091156.1|1210447_1211890_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_001056720.1|1212013_1212883_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000301711.1|1213224_1214700_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
WP_001069113.1|1214934_1216746_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_000800494.1|1216783_1217425_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_000173418.1|1217524_1218703_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_000257723.1|1218833_1219124_+	DNA damage-inducible protein YebG	NA	NA	NA	NA	NA
WP_001042123.1|1219191_1219545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000024715.1|1219638_1220298_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_000936990.1|1220510_1222562_+	oligopeptidase B	NA	NA	NA	NA	NA
WP_000944288.1|1222598_1223297_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
WP_000100257.1|1223320_1223977_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_000856224.1|1224084_1224315_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
WP_000168393.1|1224452_1224827_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_000979694.1|1224827_1225703_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_000722370.1|1225719_1226073_+	YebY family protein	NA	NA	NA	NA	NA
WP_000087636.1|1226455_1227535_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	3.0e-101
WP_001575998.1|1227509_1227788_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
WP_001237395.1|1228201_1230181_+	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
WP_000911593.1|1230869_1231118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000940753.1|1231181_1231781_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	4.7e-96
WP_000784710.1|1231777_1232005_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	66.7	2.2e-14
WP_001097218.1|1232134_1232824_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.9	2.1e-60
WP_001574213.1|1232920_1233445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798708.1|1233818_1234268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001574215.1|1234628_1235315_-	PipA/GogA/GtgA family type III secretion system effector	NA	Q9MBM0	Phage_Gifsy-2	99.6	1.8e-131
WP_001574216.1|1235590_1235920_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_000984586.1|1235903_1236356_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
WP_001541990.1|1236373_1236853_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
1236859:1236876	attL	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000877926.1|1237747_1238281_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152416.1|1238370_1239066_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
WP_000161704.1|1243120_1243843_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA	NA
WP_001536069.1|1244322_1245123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000622159.1|1246067_1246337_-|integrase	tyrosine-type recombinase/integrase	integrase	K7PHK0	Enterobacteria_phage	47.8	2.7e-11
WP_077681935.1|1246980_1247475_-	RecE	NA	A0A0U2I1R6	Escherichia_phage	70.3	3.7e-22
WP_001013467.1|1247664_1247895_+	hypothetical protein	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
WP_001050883.1|1247948_1248482_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	43.0	5.4e-11
WP_000789530.1|1248738_1248906_-	lytic enzyme	NA	NA	NA	NA	NA
WP_001576014.1|1248970_1249159_-	hypothetical protein	NA	NA	NA	NA	NA
1249003:1249020	attR	TTAAAAAGGTACTCCCGG	NA	NA	NA	NA
WP_000348542.1|1249213_1249705_+	DUF1441 family protein	NA	Q9EYD0	Enterobacteria_phage	56.2	1.6e-41
WP_001687735.1|1251809_1252310_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	77.4	1.5e-63
>prophage 4
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	1467002	1482946	4679487	tRNA,holin	Escherichia_phage(64.71%)	23	NA	NA
WP_000123686.1|1467002_1468376_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	2.1e-51
WP_001156217.1|1468419_1469355_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	7.2e-144
WP_001676915.1|1469671_1470289_-	exodeoxyribonuclease	NA	A0A088CD28	Shigella_phage	41.9	2.5e-36
WP_000800272.1|1470316_1470634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000560208.1|1470718_1470940_-	cell division protein FtsZ	NA	A0A0U2RTC4	Escherichia_phage	83.6	7.9e-33
WP_000004762.1|1471377_1471899_+	super-infection exclusion protein B	NA	NA	NA	NA	NA
WP_085981757.1|1472006_1472162_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	48.9	2.6e-06
WP_001227859.1|1472546_1473014_-	helix-turn-helix domain-containing protein	NA	A0A0U2QW76	Escherichia_phage	66.9	1.0e-53
WP_001676916.1|1473286_1473616_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	51.7	6.5e-23
WP_001033796.1|1473777_1474332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000556389.1|1474328_1475261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000882662.1|1475630_1475843_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	95.7	2.5e-28
WP_000734094.1|1476133_1476304_+	hypothetical protein	NA	A0A0U2I1S4	Escherichia_phage	61.8	8.5e-11
WP_000940751.1|1476366_1476966_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	5.5e-97
WP_000774470.1|1476965_1477256_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	76.0	5.1e-40
WP_000640113.1|1477252_1477789_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	70.9	1.4e-70
WP_000900605.1|1479959_1480355_+	tellurite resistance TerB family protein	NA	Q71TK7	Escherichia_phage	88.9	4.7e-44
WP_001688615.1|1480276_1480465_+	hypothetical protein	NA	Q8W636	Enterobacteria_phage	57.4	9.4e-11
WP_000445513.1|1480454_1480736_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	49.4	1.3e-16
WP_000802786.1|1480732_1481278_+	glycoside hydrolase family 108 protein	NA	A0A0U2S643	Escherichia_phage	83.4	2.3e-89
WP_000729249.1|1481310_1481484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000159240.1|1482123_1482462_+	EamA family transporter	NA	NA	NA	NA	NA
WP_001082296.1|1482511_1482946_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
>prophage 5
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	2134969	2145476	4679487		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2134969_2136283_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565913.1|2136309_2137389_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648783.1|2137393_2138167_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018223.1|2138182_2139157_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973709.1|2139162_2139714_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
WP_000857535.1|2139714_2140593_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023658.1|2140640_2141540_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000697848.1|2141539_2142625_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_000981469.1|2143001_2143895_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001144948.1|2144072_2145476_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
>prophage 6
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	2212673	2221844	4679487	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195340.1|2212673_2214707_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
WP_000703145.1|2214947_2215406_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	6.4e-53
WP_001197951.1|2215577_2216108_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950414.1|2216164_2216632_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	89.7	4.3e-73
WP_000598637.1|2216678_2217398_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272845.1|2217394_2219080_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
WP_001240421.1|2219302_2220034_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.4	1.7e-100
WP_001261696.1|2220093_2220201_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2220181_2220913_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569168.1|2220896_2221844_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
>prophage 7
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	2458278	2464338	4679487		Salmonella_virus(50.0%)	6	NA	NA
WP_000377779.1|2458278_2459220_+	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	87.8	1.6e-146
WP_001576268.1|2460462_2460852_+	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	85.6	1.1e-50
WP_000703599.1|2460820_2461075_+	glycosyltransferase	NA	A8CG95	Salmonella_phage	79.5	3.1e-25
WP_000400616.1|2461092_2463015_+	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	77.3	5.6e-300
WP_105789228.1|2464004_2464148_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	82.9	1.7e-12
WP_108630384.1|2464086_2464338_-	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	68.6	7.6e-08
>prophage 8
NZ_CP011942	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 chromosome, complete genome	4679487	2693724	2793673	4679487	transposase,tail,head,integrase,plate,terminase,lysis,tRNA,capsid,portal	Salmonella_phage(76.36%)	91	2712097:2712111	2792578:2792592
WP_000083345.1|2693724_2694462_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2694591_2695926_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001675040.1|2695943_2696843_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188410.1|2696945_2697533_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2697594_2697978_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|2698296_2698986_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997368.1|2699101_2700139_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098733.1|2700342_2700762_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	39.0	5.9e-13
WP_000183642.1|2700834_2701515_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082648.1|2701568_2704229_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2704343_2705699_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264473.1|2705743_2706067_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807815.1|2706063_2707365_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.6	1.8e-44
WP_000985655.1|2707468_2707924_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	3.9e-34
2712097:2712111	attL	TTTGAGTTCCCGGCC	NA	NA	NA	NA
WP_001235093.1|2713703_2716277_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.0e-127
WP_000992636.1|2716406_2717138_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2717134_2718115_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2718246_2718984_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2719255_2719594_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2719697_2719745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200077.1|2719844_2721005_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210984.1|2720965_2721874_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225188.1|2721931_2723053_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2723062_2724133_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2724572_2725091_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030985.1|2725083_2726304_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2726460_2726808_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469804.1|2726848_2727616_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2727660_2728209_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2728227_2728476_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2728728_2730090_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2730255_2731047_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2731066_2732353_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001287926.1|2732473_2733079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2733113_2733704_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059151.1|2733827_2734706_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880965.1|2734791_2736453_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2736601_2736940_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2737105_2737396_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2737385_2737862_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2738011_2738494_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237694.1|2739108_2750583_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533863.1|2750647_2752057_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196151.1|2752053_2754234_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_012543392.1|2754241_2755405_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980500.1|2755956_2756175_-	ogr/Delta-like zinc finger family protein	NA	E5G6Q4	Salmonella_phage	100.0	2.1e-38
WP_001102269.1|2756243_2757344_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	100.0	2.6e-201
WP_000980411.1|2757340_2757826_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	100.0	6.7e-77
WP_001282768.1|2757822_2760630_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	99.9	0.0e+00
WP_000763316.1|2760622_2760742_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280963.1|2760756_2761059_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	100.0	1.5e-45
WP_001207651.1|2761113_2761629_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	100.0	9.3e-93
WP_000046108.1|2761638_2762811_-|tail	phage tail sheath protein	tail	E5G6P7	Salmonella_phage	100.0	8.9e-224
WP_000974843.1|2762913_2763138_-	helix-turn-helix domain-containing protein	NA	E5G6P5	Salmonella_phage	100.0	1.5e-34
WP_000143187.1|2764007_2764583_-|tail	tail fiber assembly protein	tail	E5G6P1	Salmonella_phage	100.0	4.3e-107
WP_001274649.1|2764582_2766436_-|tail	phage tail protein	tail	E5G6P0	Salmonella_phage	100.0	0.0e+00
WP_001086804.1|2766432_2767038_-|tail	phage tail protein I	tail	E5G6N9	Salmonella_phage	100.0	1.3e-117
WP_000268332.1|2767030_2767939_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	100.0	5.4e-160
WP_000189373.1|2767925_2768285_-	GPW/gp25 family protein	NA	E5G6N7	Salmonella_phage	100.0	1.1e-60
WP_001672413.1|2768281_2768860_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	100.0	1.4e-108
WP_000958562.1|2768937_2769789_+	hypothetical protein	NA	E5G6N5	Salmonella_phage	100.0	2.8e-163
WP_000343949.1|2769790_2770237_-	phage virion morphogenesis protein	NA	E5G6N4	Salmonella_phage	99.3	2.3e-71
WP_001039958.1|2770229_2770661_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	100.0	1.7e-76
WP_000196199.1|2770756_2771185_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	100.0	2.3e-68
WP_001069923.1|2771181_2771697_-	lysozyme	NA	E5G6N1	Salmonella_phage	100.0	5.3e-96
WP_000171565.1|2771677_2771893_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868184.1|2771896_2772100_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000673537.1|2772099_2772564_-|head	head completion/stabilization protein	head	E5G6M8	Salmonella_phage	100.0	9.9e-86
WP_000059173.1|2772657_2773308_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	100.0	4.9e-115
WP_000730759.1|2773311_2774373_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	100.0	2.1e-195
WP_000216276.1|2774389_2775223_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	100.0	3.1e-130
WP_001098395.1|2775365_2777132_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	97.1	0.0e+00
WP_001542203.1|2777131_2778172_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	100.0	5.5e-201
WP_001284991.1|2778275_2779940_-	AIPR family protein	NA	E5G6M2	Salmonella_phage	100.0	0.0e+00
WP_001673609.1|2780253_2780931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001217571.1|2781044_2781278_-	DinI family protein	NA	E5G6M1	Salmonella_phage	98.7	1.8e-35
WP_001154433.1|2781288_2781477_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	100.0	1.4e-27
WP_000017507.1|2781629_2784044_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	100.0	0.0e+00
WP_000104187.1|2784040_2784898_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	100.0	6.8e-165
WP_000752613.1|2784894_2785122_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
WP_001244219.1|2785121_2785355_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	100.0	1.7e-33
WP_000963474.1|2785422_2785764_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	100.0	1.2e-56
WP_000956190.1|2785727_2785928_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	100.0	2.4e-33
WP_000460848.1|2785935_2786445_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	100.0	1.5e-87
WP_000102105.1|2786478_2786721_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	97.5	6.8e-38
WP_000932273.1|2786842_2787475_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	51.4	6.3e-59
WP_000218402.1|2787477_2788494_+|integrase	site-specific integrase	integrase	E5G6L0	Salmonella_phage	100.0	5.0e-199
WP_038394562.1|2789046_2789709_+	hypothetical protein	NA	E5G6K9	Salmonella_phage	99.5	1.3e-123
WP_001142974.1|2789970_2790564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000445376.1|2790962_2791766_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	44.7	1.2e-62
WP_089113803.1|2792561_2793673_-|transposase	IS3-like element IS1351 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	7.6e-07
2792578:2792592	attR	TTTGAGTTCCCGGCC	NA	NA	NA	NA
>prophage 1
NZ_CP011943	Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence	59372	40249	47157	59372	transposase	Escherichia_phage(33.33%)	8	NA	NA
WP_001541564.1|40249_40666_+	hypothetical protein	NA	O64348	Escherichia_phage	42.9	8.2e-07
WP_001527010.1|40849_41185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000176303.1|41241_41847_+	DUF2913 family protein	NA	NA	NA	NA	NA
WP_000728919.1|41843_42785_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	54.7	4.7e-74
WP_000427676.1|43199_44405_+	AAA family ATPase	NA	A0A077SL49	Escherichia_phage	69.3	1.5e-162
WP_000064277.1|44404_45379_+	ParB/RepB/Spo0J family partition protein	NA	A0A1B0V750	Salmonella_phage	53.5	5.1e-84
WP_000457542.1|45460_46735_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	64.5	3.9e-156
WP_000925628.1|46734_47157_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	52.4	2.0e-29
