The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015576	Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 chromosome, complete genome	1753277	309499	351523	1753277	tRNA,plate,capsid,tail,transposase,terminase,integrase	Campylobacter_phage(35.0%)	60	303269:303285	326877:326893
303269:303285	attL	ATTTTAAATTCTTTTTT	NA	NA	NA	NA
WP_063997685.1|309499_310417_-|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_063997686.1|310413_311418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063997687.1|311414_311783_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_063997688.1|311792_312242_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_063997689.1|312241_313123_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_082858040.1|313769_314426_-	LexA family transcriptional regulator	NA	M5A9D2	Nitratiruptor_phage	44.5	4.7e-25
WP_059432068.1|314619_314970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059430984.1|314958_315528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059430985.1|315634_315850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997690.1|315849_317037_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_063997691.1|317160_318279_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_167347760.1|318483_318627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082858041.1|318646_319402_+	AAA family ATPase	NA	A0A2D1GNS0	Pseudomonas_phage	33.2	2.3e-23
WP_082858042.1|319643_319985_+	DUF4406 domain-containing protein	NA	NA	NA	NA	NA
WP_063997692.1|320000_320258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997693.1|320326_320740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997694.1|320916_321114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997695.1|321272_321725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997696.1|321740_322235_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_063997697.1|322209_322467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998959.1|322530_322746_+	hypothetical protein	NA	X2KXC5	Campylobacter_phage	51.9	3.6e-06
WP_063997698.1|322872_323088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997699.1|323074_323608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997700.1|323597_323855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997701.1|323841_325530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997702.1|325797_326358_-	hypothetical protein	NA	A7YGZ0	Campylobacter_phage	34.9	5.7e-19
WP_063997703.1|326469_327720_-|capsid	minor capsid protein	capsid	A4JWJ6	Burkholderia_virus	43.3	2.0e-40
326877:326893	attR	ATTTTAAATTCTTTTTT	NA	NA	NA	NA
WP_063997704.1|327709_329107_-	DUF935 family protein	NA	A0A2H4JHL1	uncultured_Caudovirales_phage	25.3	1.5e-20
WP_063997705.1|329106_330780_-|terminase	phage terminase large subunit	terminase	R9U0T3	Rhizobium_phage	36.1	1.5e-83
WP_059431000.1|330779_331259_-	DUF1804 family protein	NA	NA	NA	NA	NA
WP_059431001.1|331348_331756_-	DUF1320 family protein	NA	NA	NA	NA	NA
WP_063997706.1|331888_332857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063997707.1|332868_333300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063997708.1|333301_334156_-	hypothetical protein	NA	A0A2H4JAW3	uncultured_Caudovirales_phage	28.1	5.2e-24
WP_059431005.1|334152_334638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063997709.1|334794_335115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997710.1|335056_335302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059442875.1|335396_335717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997711.1|335713_336325_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPY9	Mannheimia_phage	38.3	4.3e-12
WP_063997712.1|336332_336626_+|plate	baseplate assembly protein	plate	Q75QM0	Wolbachia_phage	43.3	2.5e-10
WP_063997713.1|336664_337777_+|plate	baseplate assembly protein	plate	A0A1B2LRR9	Wolbachia_phage	49.4	8.7e-11
WP_063997714.1|337865_338474_+|tail	phage tail protein I	tail	A7YH02	Campylobacter_phage	49.4	1.2e-14
WP_063997715.1|338466_339435_+	hypothetical protein	NA	A0A2H4J931	uncultured_Caudovirales_phage	40.9	4.7e-21
WP_063997716.1|339434_339815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997717.1|339827_340394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082858118.1|340393_340741_+	DUF1353 domain-containing protein	NA	NA	NA	NA	NA
WP_063997719.1|340852_341779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997720.1|341780_342962_+|tail	phage tail protein	tail	A7YGT4	Campylobacter_phage	58.4	2.1e-124
WP_063997721.1|342973_343495_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_063997722.1|343779_344034_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_167347733.1|343991_344168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069435746.1|344552_346574_+|tail	phage tail tape measure protein	tail	A7YGZ1	Campylobacter_phage	29.4	1.0e-78
WP_063997724.1|346767_347142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063997725.1|347131_347323_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_063997726.1|347514_347955_+	glycoside hydrolase family protein	NA	A0A1B1IW80	uncultured_Mediterranean_phage	39.0	4.6e-16
WP_063997727.1|347955_348927_+	hypothetical protein	NA	A0A1B2LRT8	Wolbachia_phage	26.8	3.0e-15
WP_059432200.1|349407_349641_+	helix-turn-helix transcriptional regulator	NA	X2KQ78	Campylobacter_phage	54.1	1.8e-11
WP_063997728.1|350048_350702_+	Rha family transcriptional regulator	NA	X2KM03	Campylobacter_phage	48.1	3.7e-30
WP_063997729.1|350698_350923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082858044.1|351010_351523_+	S24 family peptidase	NA	X4YTE2	Pseudomonas_phage	28.7	1.5e-05
>prophage 2
NZ_CP015576	Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 chromosome, complete genome	1753277	794501	804038	1753277		Pseudomonas_phage(14.29%)	10	NA	NA
WP_148660167.1|794501_795635_-	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	62.4	8.8e-136
WP_063998127.1|795758_796163_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_063998128.1|796285_796684_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_063998129.1|796667_797879_+	threonine ammonia-lyase	NA	A0A1W6JHY1	Lactococcus_phage	28.2	2.2e-07
WP_082858058.1|798406_799423_-	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	3.4e-14
WP_063998986.1|799426_799936_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	36.9	3.5e-15
WP_063998130.1|800225_801536_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	34.1	8.9e-31
WP_063998987.1|801522_802689_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	A0A2H4PQG9	Staphylococcus_phage	34.8	1.3e-09
WP_063998131.1|802685_803357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998132.1|803360_804038_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	39.0	1.3e-17
>prophage 3
NZ_CP015576	Campylobacter hyointestinalis subsp. lawsonii CCUG 27631 chromosome, complete genome	1753277	943616	957534	1753277	integrase	Campylobacter_phage(30.77%)	26	955342:955358	966502:966518
WP_063998259.1|943616_944285_+	LexA family transcriptional regulator	NA	A0A097BY95	Leuconostoc_phage	25.7	2.8e-09
WP_063998260.1|944320_944770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998261.1|944766_945336_+	ImmA/IrrE family metallo-endopeptidase	NA	Q332A2	Clostridium_botulinum_C_phage	32.9	8.9e-12
WP_063998262.1|945384_945738_-	HicB family protein	NA	NA	NA	NA	NA
WP_063998263.1|945734_945962_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_063998264.1|946775_947726_+	RelA/SpoT domain-containing protein	NA	A0A1B0VBT5	Salmonella_phage	29.5	3.8e-23
WP_063998265.1|947722_947905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998266.1|947906_948134_+	helix-turn-helix transcriptional regulator	NA	X2KXC5	Campylobacter_phage	55.6	2.3e-11
WP_082858069.1|948597_949215_+	Rha family transcriptional regulator	NA	X2KM03	Campylobacter_phage	36.3	1.3e-24
WP_063998268.1|949226_949523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998269.1|949822_950086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998270.1|950086_950740_+	ERF family protein	NA	J9QD21	Clostridium_phage	49.7	4.0e-40
WP_063998271.1|950729_951563_+	hypothetical protein	NA	H9C0I7	Bdellovibrio_phage	28.1	2.2e-11
WP_063998272.1|951552_951870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998273.1|951856_952207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998274.1|952248_952488_+	hypothetical protein	NA	X2KQ78	Campylobacter_phage	44.4	1.4e-06
WP_063998275.1|952874_953078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998276.1|953078_953765_+	hypothetical protein	NA	A0A2K9V3K3	Faecalibacterium_phage	36.4	5.0e-17
WP_063998277.1|953803_954553_+	site-specific DNA-methyltransferase	NA	X2KR14	Campylobacter_phage	76.5	2.2e-111
WP_063998278.1|954549_954747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998279.1|954757_955348_+	hypothetical protein	NA	NA	NA	NA	NA
955342:955358	attL	CAGATAAAGGATAAAAA	NA	NA	NA	NA
WP_063998280.1|955358_955823_+	single-stranded DNA-binding protein	NA	I6NRL7	Burkholderia_virus	41.7	1.3e-13
WP_167347787.1|955836_955974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998281.1|955966_956230_+	DUF3310 domain-containing protein	NA	Q774Z7	Bordetella_phage	61.3	1.8e-15
WP_063998282.1|956240_956531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063998283.1|956514_957534_+|integrase	site-specific integrase	integrase	A0A1S5RH79	Helicobacter_phage	30.7	1.3e-21
966502:966518	attR	CAGATAAAGGATAAAAA	NA	NA	NA	NA
