assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	1	428344-428488	1	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	GCCCTGGGCACACCGGCCTTGATATTCTTCTGTTTCAGTTCCCAGGCATC	50	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA|86aa|up_4|NZ_CP048223.1_423596_423854_-,NA	NA|481aa|up_9|NZ_CP048223.1_418575_420018_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|317aa|up_8|NZ_CP048223.1_420760_421711_+	PRK05269, PRK05269, transaldolase B; Provisional	NA|61aa|up_7|NZ_CP048223.1_421870_422053_+	pfam12065, DUF3545, Protein of unknown function (DUF3545)	NA|183aa|up_6|NZ_CP048223.1_422101_422650_-	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|223aa|up_5|NZ_CP048223.1_422896_423565_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|86aa|up_4|NZ_CP048223.1_423596_423854_-	NA	NA|344aa|up_3|NZ_CP048223.1_424031_425063_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|127aa|up_2|NZ_CP048223.1_425357_425738_+	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA	NA|428aa|up_1|NZ_CP048223.1_425844_427128_-	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|285aa|up_0|NZ_CP048223.1_427432_428287_-	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|128aa|down_0|NZ_CP048223.1_429364_429748_-	pfam04247, SirB, Invasion gene expression up-regulator, SirB	NA|363aa|down_1|NZ_CP048223.1_430710_431799_-	PRK00591, prfA, peptide chain release factor 1; Validated	NA|419aa|down_2|NZ_CP048223.1_431852_433109_-	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|195aa|down_3|NZ_CP048223.1_433229_433814_+	cd16326, LolB, LolB, an outer membrane lipoprotein receptor	NA|290aa|down_4|NZ_CP048223.1_433840_434710_+	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|316aa|down_5|NZ_CP048223.1_435074_436022_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|663aa|down_6|NZ_CP048223.1_436123_438112_+	cd07409, MPP_CD73_N, CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain	NA|199aa|down_7|NZ_CP048223.1_438320_438917_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|364aa|down_8|NZ_CP048223.1_439088_440180_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|188aa|down_9|NZ_CP048223.1_440251_440815_+	pfam13730, HTH_36, Helix-turn-helix domain
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	2	1450474-1450572	2	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	AACTGATAGTTCAATCTTTATGC	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA|176aa|down_4|NZ_CP048223.1_1455339_1455867_+	NA|443aa|up_9|NZ_CP048223.1_1436634_1437963_+	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|465aa|up_8|NZ_CP048223.1_1438036_1439431_-	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|307aa|up_7|NZ_CP048223.1_1439621_1440542_+	cd08460, PBP2_DntR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|849aa|up_6|NZ_CP048223.1_1440832_1443379_+	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|106aa|up_5|NZ_CP048223.1_1443485_1443803_+	PRK09511, nirD, nitrite reductase small subunit NirD	NA|271aa|up_4|NZ_CP048223.1_1443854_1444667_+	PRK11562, PRK11562, nitrite transporter NirC; Provisional	NA|469aa|up_3|NZ_CP048223.1_1444679_1446086_+	PRK10637, cysG, siroheme synthase CysG	NA|475aa|up_2|NZ_CP048223.1_1446236_1447661_+	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|162aa|up_1|NZ_CP048223.1_1448957_1449443_+	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|225aa|up_0|NZ_CP048223.1_1449714_1450389_-	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter	NA|476aa|down_0|NZ_CP048223.1_1450857_1452285_-	PRK00029, PRK00029, YdiU family protein	NA|101aa|down_1|NZ_CP048223.1_1452389_1452692_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|608aa|down_2|NZ_CP048223.1_1452793_1454617_-	PRK11057, PRK11057, ATP-dependent DNA helicase RecQ; Provisional	NA|155aa|down_3|NZ_CP048223.1_1454750_1455215_+	PRK11688, PRK11688, thioesterase family protein	NA|176aa|down_4|NZ_CP048223.1_1455339_1455867_+	NA	NA|235aa|down_5|NZ_CP048223.1_1456380_1457085_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|281aa|down_6|NZ_CP048223.1_1457130_1457973_-	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|302aa|down_7|NZ_CP048223.1_1457969_1458875_-	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|385aa|down_8|NZ_CP048223.1_1458871_1460026_-	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|362aa|down_9|NZ_CP048223.1_1460102_1461188_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	3	1725960-1726046	3	CRISPRCasFinder	no	WYL	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Unclear	TATTCCAACCTGATCCGAACCCT	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA	NA|84aa|up_9|NZ_CP048223.1_1716364_1716616_+	COG3433, COG3433, Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]	NA|400aa|up_8|NZ_CP048223.1_1716755_1717955_+	PRK02769, PRK02769, histidine decarboxylase; Provisional	NA|454aa|up_7|NZ_CP048223.1_1718056_1719418_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|549aa|up_6|NZ_CP048223.1_1719505_1721152_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|83aa|up_5|NZ_CP048223.1_1721157_1721406_-	pfam01809, Haemolytic, Haemolytic domain	NA|120aa|up_4|NZ_CP048223.1_1721372_1721732_-	PRK01732, rnpA, ribonuclease P; Reviewed	NA|45aa|up_3|NZ_CP048223.1_1721731_1721866_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|245aa|up_2|NZ_CP048223.1_1722135_1722870_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|222aa|up_1|NZ_CP048223.1_1722882_1723548_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|253aa|up_0|NZ_CP048223.1_1723551_1724310_-	cd13709, PBP2_YxeM, Substrate binding domain of an ABC transporter YxeMNO; the type 2 periplasmic binding protein fold	NA|368aa|down_0|NZ_CP048223.1_1726074_1727178_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|368aa|down_1|NZ_CP048223.1_1727180_1728284_+	PRK00064, recF, recombination protein F; Reviewed	NA|805aa|down_2|NZ_CP048223.1_1728280_1730695_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|255aa|down_3|NZ_CP048223.1_1730762_1731527_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|127aa|down_4|NZ_CP048223.1_1731730_1732111_-	cd07261, EhpR_like, phenazine resistance protein, EhpR	WYL|235aa|down_5|NZ_CP048223.1_1732178_1732883_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|138aa|down_6|NZ_CP048223.1_1733161_1733575_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|146aa|down_7|NZ_CP048223.1_1733668_1734106_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|144aa|down_8|NZ_CP048223.1_1735301_1735733_-	cd17019, T3SC_IA_ShcA-like, Class IA type III secretion system chaperone protein, similar to Pseudomonas syringae chaperone protein ShcA	NA|416aa|down_9|NZ_CP048223.1_1735845_1737093_-	PRK09440, avtA, valine--pyruvate transaminase; Provisional
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	4	1816158-1816251	4	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	GGAGAAACAGCTCGAGATTGCGAAGA	26	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA|101aa|up_8|NZ_CP048223.1_1799724_1800027_-,NA|64aa|up_1|NZ_CP048223.1_1814069_1814261_-,NA|63aa|down_2|NZ_CP048223.1_1820086_1820275_+	NA|165aa|up_9|NZ_CP048223.1_1799167_1799662_-	pfam00731, AIRC, AIR carboxylase	NA|101aa|up_8|NZ_CP048223.1_1799724_1800027_-	NA	NA|309aa|up_7|NZ_CP048223.1_1800032_1800959_-	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily	NA|301aa|up_6|NZ_CP048223.1_1801070_1801973_+	cd08429, PBP2_NhaR, The C-terminal substrate binding domain of LysR-type transcriptional activator of the nhaA gene, encoding Na+/H+ antiporter, contains the type 2 periplasmic binding fold	NA|612aa|up_5|NZ_CP048223.1_1802239_1804075_+	PRK10641, btuB, TonB-dependent vitamin B12 receptor BtuB	NA|264aa|up_4|NZ_CP048223.1_1804191_1804983_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|164aa|up_3|NZ_CP048223.1_1805001_1805493_-	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins	NA|857aa|up_2|NZ_CP048223.1_1811407_1813978_-	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|64aa|up_1|NZ_CP048223.1_1814069_1814261_-	NA	NA|291aa|up_0|NZ_CP048223.1_1814433_1815306_+	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|494aa|down_0|NZ_CP048223.1_1816376_1817858_+	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|550aa|down_1|NZ_CP048223.1_1818014_1819664_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|63aa|down_2|NZ_CP048223.1_1820086_1820275_+	NA	NA|279aa|down_3|NZ_CP048223.1_1820436_1821273_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|199aa|down_4|NZ_CP048223.1_1821423_1822020_-	PRK09480, slmA, division inhibitor protein; Provisional	NA|153aa|down_5|NZ_CP048223.1_1822088_1822547_-	PRK00601, dut, dUTP diphosphatase	NA|401aa|down_6|NZ_CP048223.1_1822692_1823895_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|221aa|down_7|NZ_CP048223.1_1824042_1824705_+	PRK00024, PRK00024, DNA repair protein RadC	NA|79aa|down_8|NZ_CP048223.1_1824841_1825078_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|56aa|down_9|NZ_CP048223.1_1825089_1825257_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	5	1898876-1899018	5	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	CGAGATCAGCCCGAACCCTGTCAAATGGCG	30	0	0	NA	NA	NA	2	2	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA|72aa|down_8|NZ_CP048223.1_1907083_1907299_+	NA|387aa|up_9|NZ_CP048223.1_1884873_1886034_-	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown]	NA|236aa|up_8|NZ_CP048223.1_1886527_1887235_+	cd16338, CpcT, T-type phycobiliprotein (PBP) lyase	NA|296aa|up_7|NZ_CP048223.1_1887261_1888149_-	cd08477, PBP2_CrgA_like_8, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|207aa|up_6|NZ_CP048223.1_1888250_1888871_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|345aa|up_5|NZ_CP048223.1_1888981_1890016_-	pfam04143, Sulf_transp, Sulphur transport	NA|921aa|up_4|NZ_CP048223.1_1891363_1894126_+	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional	NA|216aa|up_3|NZ_CP048223.1_1894262_1894910_-	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|273aa|up_2|NZ_CP048223.1_1895026_1895845_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|301aa|up_1|NZ_CP048223.1_1895913_1896816_-	PRK15430, PRK15430, EamA family transporter RarD	NA|499aa|up_0|NZ_CP048223.1_1897240_1898737_-	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like	NA|181aa|down_0|NZ_CP048223.1_1899020_1899563_-	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR	NA|444aa|down_1|NZ_CP048223.1_1899736_1901068_+	PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional	NA|499aa|down_2|NZ_CP048223.1_1901174_1902671_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|252aa|down_3|NZ_CP048223.1_1902756_1903512_+	PRK05665, PRK05665, amidotransferase; Provisional	NA|372aa|down_4|NZ_CP048223.1_1903508_1904624_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|280aa|down_5|NZ_CP048223.1_1904740_1905580_+	cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases	NA|151aa|down_6|NZ_CP048223.1_1905878_1906331_+	PRK11014, PRK11014, HTH-type transcriptional repressor NsrR	NA|171aa|down_7|NZ_CP048223.1_1906432_1906945_-	cd10564, NapF_like, NapF, iron-sulfur subunit of periplasmic nitrate reductase	NA|72aa|down_8|NZ_CP048223.1_1907083_1907299_+	NA	NA|447aa|down_9|NZ_CP048223.1_1907295_1908636_+	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	6	2424290-2424389	6	CRISPRCasFinder	no	cas3	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Unclear	CCTCGCCTTTATCGGCGCAGGCA	23	0	0	NA	NA	NA	1	1	Unclear	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA|77aa|up_7|NZ_CP048223.1_2416480_2416711_+,NA|100aa|down_3|NZ_CP048223.1_2426562_2426862_-	NA|153aa|up_9|NZ_CP048223.1_2415566_2416025_+	PRK11639, PRK11639, zinc uptake transcriptional repressor Zur	NA|154aa|up_8|NZ_CP048223.1_2416014_2416476_+	cd17906, CheX, chemotaxis phosphatase CheX	NA|77aa|up_7|NZ_CP048223.1_2416480_2416711_+	NA	NA|436aa|up_6|NZ_CP048223.1_2416786_2418094_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|237aa|up_5|NZ_CP048223.1_2418285_2418996_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	cas3|408aa|up_4|NZ_CP048223.1_2419124_2420348_+	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|258aa|up_3|NZ_CP048223.1_2420536_2421310_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|370aa|up_2|NZ_CP048223.1_2421341_2422451_-	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|345aa|up_1|NZ_CP048223.1_2422486_2423521_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|234aa|up_0|NZ_CP048223.1_2423560_2424262_+	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|184aa|down_0|NZ_CP048223.1_2425205_2425757_+	pfam02325, YGGT, YGGT family	NA|100aa|down_1|NZ_CP048223.1_2425756_2426056_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|140aa|down_2|NZ_CP048223.1_2426074_2426494_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|100aa|down_3|NZ_CP048223.1_2426562_2426862_-	NA	NA|535aa|down_4|NZ_CP048223.1_2426971_2428576_-	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|236aa|down_5|NZ_CP048223.1_2428757_2429465_+	pfam08857, ParBc_2, Putative ParB-like nuclease	NA|221aa|down_6|NZ_CP048223.1_2429512_2430175_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|143aa|down_7|NZ_CP048223.1_2430480_2430909_+	pfam10952, DUF2753, Protein of unknown function (DUF2753)	NA|250aa|down_8|NZ_CP048223.1_2430912_2431662_-	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|147aa|down_9|NZ_CP048223.1_2431751_2432192_+	pfam04314, PCuAC, Copper chaperone PCu(A)C
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	7	2669709-2669821	7	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	AGAAACAGGGGCCTAGTGCCCCTGTTTT	28	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA|68aa|down_9|NZ_CP048223.1_2680025_2680229_+	NA|349aa|up_9|NZ_CP048223.1_2656934_2657981_+	TIGR00661, conserved_hypothetical_protein, conserved hypothetical protein	NA|573aa|up_8|NZ_CP048223.1_2658625_2660344_+	PRK08979, PRK08979, acetolactate synthase 3 large subunit	NA|165aa|up_7|NZ_CP048223.1_2660343_2660838_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|718aa|up_6|NZ_CP048223.1_2661243_2663397_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|401aa|up_5|NZ_CP048223.1_2663467_2664670_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|147aa|up_4|NZ_CP048223.1_2664972_2665413_+	pfam04217, DUF412, Protein of unknown function, DUF412	NA|167aa|up_3|NZ_CP048223.1_2665473_2665974_-	PRK05445, PRK05445, YfbU family protein	NA|155aa|up_2|NZ_CP048223.1_2666417_2666882_-	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed	NA|178aa|up_1|NZ_CP048223.1_2666904_2667438_-	PRK11589, gcvR, glycine cleavage system transcriptional repressor; Provisional	NA|296aa|up_0|NZ_CP048223.1_2667705_2668593_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|368aa|down_0|NZ_CP048223.1_2669853_2670957_+	PRK13960, PRK13960, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|201aa|down_1|NZ_CP048223.1_2671085_2671688_-	PRK07578, PRK07578, short chain dehydrogenase; Provisional	NA|301aa|down_2|NZ_CP048223.1_2671782_2672685_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|211aa|down_3|NZ_CP048223.1_2672756_2673389_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|146aa|down_4|NZ_CP048223.1_2673460_2673898_+	pfam01230, HIT, HIT domain	NA|233aa|down_5|NZ_CP048223.1_2673996_2674695_+	pfam11813, DUF3334, Protein of unknown function (DUF3334)	NA|333aa|down_6|NZ_CP048223.1_2674764_2675763_-	pfam11059, DUF2860, Protein of unknown function (DUF2860)	NA|771aa|down_7|NZ_CP048223.1_2675970_2678283_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|455aa|down_8|NZ_CP048223.1_2678338_2679703_+	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional	NA|68aa|down_9|NZ_CP048223.1_2680025_2680229_+	NA
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	8	3021883-3021973	8	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	TGTATGGAGATGGTATTCACCTGACA	26	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA|75aa|down_8|NZ_CP048223.1_3032395_3032620_+	NA|458aa|up_9|NZ_CP048223.1_3008754_3010128_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|353aa|up_8|NZ_CP048223.1_3010196_3011255_-	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|582aa|up_7|NZ_CP048223.1_3011318_3013064_-	PRK14491, PRK14491, putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional	NA|216aa|up_6|NZ_CP048223.1_3013060_3013708_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|232aa|up_5|NZ_CP048223.1_3013679_3014375_-	COG1122, CbiO, ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]	NA|234aa|up_4|NZ_CP048223.1_3014490_3015192_-	COG4662, TupA, ABC-type tungstate transport system, periplasmic component [Coenzyme metabolism]	NA|282aa|up_3|NZ_CP048223.1_3015256_3016102_-	COG2998, TupA, tungsten ABC transporter substrate-binding protein [Coenzyme metabolism]	NA|720aa|up_2|NZ_CP048223.1_3017743_3019903_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|289aa|up_1|NZ_CP048223.1_3020027_3020894_-	pfam12727, PBP_like, PBP superfamily domain	NA|286aa|up_0|NZ_CP048223.1_3020909_3021767_-	pfam02634, FdhD-NarQ, FdhD/NarQ family	NA|347aa|down_0|NZ_CP048223.1_3022055_3023096_+	pfam00665, rve, Integrase core domain	NA|344aa|down_1|NZ_CP048223.1_3023155_3024187_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|241aa|down_2|NZ_CP048223.1_3024288_3025011_-	PHA02529, O, capsid-scaffolding protein; Provisional	NA|70aa|down_3|NZ_CP048223.1_3025325_3025535_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|238aa|down_4|NZ_CP048223.1_3025872_3026586_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|157aa|down_5|NZ_CP048223.1_3026626_3027097_-	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain	NA|1103aa|down_6|NZ_CP048223.1_3027223_3030532_-	PRK11281, PRK11281, mechanosensitive channel MscK	NA|471aa|down_7|NZ_CP048223.1_3030679_3032092_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|75aa|down_8|NZ_CP048223.1_3032395_3032620_+	NA	NA|394aa|down_9|NZ_CP048223.1_3032697_3033879_-	cd03879, M28_AAP, M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	9	3084646-3084784	9	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	GGGCGCTCAGTGGGATCTTGCCAGCGGCGCGATTGGCATAAGCCTGCTTATTG	53	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA|213aa|up_8|NZ_CP048223.1_3077381_3078020_-,NA|91aa|up_6|NZ_CP048223.1_3078866_3079139_-,NA|126aa|up_5|NZ_CP048223.1_3079214_3079592_+,NA	NA|344aa|up_9|NZ_CP048223.1_3076334_3077366_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|213aa|up_8|NZ_CP048223.1_3077381_3078020_-	NA	NA|172aa|up_7|NZ_CP048223.1_3078097_3078613_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|91aa|up_6|NZ_CP048223.1_3078866_3079139_-	NA	NA|126aa|up_5|NZ_CP048223.1_3079214_3079592_+	NA	NA|194aa|up_4|NZ_CP048223.1_3079819_3080401_+	pfam07081, DUF1349, Protein of unknown function (DUF1349)	NA|234aa|up_3|NZ_CP048223.1_3080726_3081428_+	PRK13374, PRK13374, DeoD-type purine-nucleoside phosphorylase	NA|388aa|up_2|NZ_CP048223.1_3081483_3082647_+	PRK03699, PRK03699, putative transporter; Provisional	NA|226aa|up_1|NZ_CP048223.1_3082756_3083434_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|256aa|up_0|NZ_CP048223.1_3083584_3084352_-	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|385aa|down_0|NZ_CP048223.1_3085399_3086554_-	TIGR01013, Sodium-dependent_phosphate_transport_protein, Phosphate:Na+ Symporter (PNaS) Family	NA|450aa|down_1|NZ_CP048223.1_3086744_3088094_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|434aa|down_2|NZ_CP048223.1_3088474_3089776_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|435aa|down_3|NZ_CP048223.1_3089984_3091289_-	PRK07495, PRK07495, 4-aminobutyrate--2-oxoglutarate transaminase	NA|488aa|down_4|NZ_CP048223.1_3091535_3092999_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|200aa|down_5|NZ_CP048223.1_3093355_3093955_+	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR	NA|426aa|down_6|NZ_CP048223.1_3094006_3095284_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|86aa|down_7|NZ_CP048223.1_3095418_3095676_-	pfam11730, DUF3297, Protein of unknown function (DUF3297)	NA|348aa|down_8|NZ_CP048223.1_3095877_3096921_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|113aa|down_9|NZ_CP048223.1_3097108_3097447_+	pfam05656, DUF805, Protein of unknown function (DUF805)
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	10	3477014-3477109	10	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	TGCAATGGAGCTGCATATGTGTG	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA,NA|320aa|down_7|NZ_CP048223.1_3493368_3494328_-,NA|131aa|down_9|NZ_CP048223.1_3496052_3496445_-	NA|357aa|up_9|NZ_CP048223.1_3468514_3469585_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|78aa|up_8|NZ_CP048223.1_3469610_3469844_-	pfam01206, TusA, Sulfurtransferase TusA	NA|478aa|up_7|NZ_CP048223.1_3469993_3471427_+	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|160aa|up_6|NZ_CP048223.1_3471622_3472102_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|117aa|up_5|NZ_CP048223.1_3472160_3472511_+	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|132aa|up_4|NZ_CP048223.1_3472507_3472903_+	pfam09842, DUF2069, Predicted membrane protein (DUF2069)	NA|207aa|up_3|NZ_CP048223.1_3472955_3473576_-	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown]	NA|301aa|up_2|NZ_CP048223.1_3473718_3474621_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|257aa|up_1|NZ_CP048223.1_3475152_3475923_+	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]	NA|258aa|up_0|NZ_CP048223.1_3475972_3476746_+	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|231aa|down_0|NZ_CP048223.1_3477846_3478539_+	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]	NA|175aa|down_1|NZ_CP048223.1_3478900_3479425_+	pfam09411, PagL, Lipid A 3-O-deacylase (PagL)	NA|214aa|down_2|NZ_CP048223.1_3479529_3480171_-	COG3235, COG3235, Predicted membrane protein [Function unknown]	NA|262aa|down_3|NZ_CP048223.1_3480258_3481044_-	PRK11145, pflA, pyruvate formate lyase 1-activating protein	NA|980aa|down_4|NZ_CP048223.1_3481109_3484049_-	cd01948, EAL, EAL domain	NA|1630aa|down_5|NZ_CP048223.1_3486043_3490933_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|785aa|down_6|NZ_CP048223.1_3490940_3493295_+	PRK11240, PRK11240, penicillin-binding protein 1C; Provisional	NA|320aa|down_7|NZ_CP048223.1_3493368_3494328_-	NA	NA|483aa|down_8|NZ_CP048223.1_3494505_3495954_+	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional	NA|131aa|down_9|NZ_CP048223.1_3496052_3496445_-	NA
GCF_001643275.2_ASM164327v2	NZ_CP048223	Aeromonas salmonicida subsp. salmonicida strain J223 chromosome, complete genome	11	4651609-4651732	11	CRISPRCasFinder	no		DinG,csa3,TnsE_C,WYL,cas3,DEDDh	Orphan	TGTAGGGTCGATTAGCGGAGCGTAATCGTCCGCGGCAACA	40	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,TnsE_C,WYL,cas3,DEDDh	NA|103aa|up_0|NZ_CP048223.1_4651181_4651490_-,NA	NA|81aa|up_9|NZ_CP048223.1_4640851_4641094_-	pfam09012, FeoC, FeoC like transcriptional regulator	NA|757aa|up_8|NZ_CP048223.1_4641090_4643361_-	PRK09554, feoB, Fe(2+) transporter permease subunit FeoB	NA|76aa|up_7|NZ_CP048223.1_4643357_4643585_-	pfam04023, FeoA, FeoA domain	NA|110aa|up_6|NZ_CP048223.1_4643704_4644034_+	PRK09019, PRK09019, stress response translation initiation inhibitor YciH	NA|186aa|up_5|NZ_CP048223.1_4644278_4644836_+	COG2119, COG2119, Predicted membrane protein [Function unknown]	NA|313aa|up_4|NZ_CP048223.1_4645088_4646027_+	pfam09925, DUF2157, Predicted membrane protein (DUF2157)	NA|336aa|up_3|NZ_CP048223.1_4646063_4647071_+	pfam14351, DUF4401, Domain of unknown function (DUF4401)	NA|168aa|up_2|NZ_CP048223.1_4647067_4647571_+	pfam14345, GDYXXLXY, GDYXXLXY protein	NA|249aa|up_1|NZ_CP048223.1_4648506_4649253_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein	NA|103aa|up_0|NZ_CP048223.1_4651181_4651490_-	NA	NA|353aa|down_0|NZ_CP048223.1_4652509_4653568_+	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|492aa|down_1|NZ_CP048223.1_4653697_4655173_+	pfam13175, AAA_15, AAA ATPase domain	NA|344aa|down_2|NZ_CP048223.1_4655729_4656761_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|459aa|down_3|NZ_CP048223.1_4656997_4658374_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|166aa|down_4|NZ_CP048223.1_4658565_4659063_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|237aa|down_5|NZ_CP048223.1_4659052_4659763_+	pfam14091, DUF4269, Domain of unknown function (DUF4269)	NA|255aa|down_6|NZ_CP048223.1_4659759_4660524_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|59aa|down_7|NZ_CP048223.1_4660987_4661164_+	pfam12244, DUF3606, Protein of unknown function (DUF3606)	NA|258aa|down_8|NZ_CP048223.1_4661317_4662091_-	PRK06172, PRK06172, SDR family oxidoreductase	NA|323aa|down_9|NZ_CP048223.1_4662198_4663167_+	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold
