The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016948	Serratia surfactantfaciens strain YD25 chromosome, complete genome	5117644	1485803	1508867	5117644	coat,protease	Moraxella_phage(50.0%)	20	NA	NA
WP_177342836.1|1485803_1486739_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_063919607.1|1486755_1489098_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_019454868.1|1489249_1490017_-	molecular chaperone	NA	NA	NA	NA	NA
WP_156785408.1|1490037_1490580_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_063919289.1|1490573_1491077_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_063919290.1|1491079_1491616_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_063919291.1|1491890_1492427_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_063919292.1|1492686_1494123_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
WP_063919609.1|1494225_1496856_-	PqiB family protein	NA	NA	NA	NA	NA
WP_025159930.1|1496824_1498072_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_019454877.1|1498328_1498826_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_019454878.1|1498922_1499633_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_063919293.1|1499652_1501701_+	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	33.9	1.2e-85
WP_019454880.1|1501768_1502614_-	DMT family transporter	NA	NA	NA	NA	NA
WP_063919294.1|1502610_1503918_-	opine metallophore biosynthesis dehydrogenase	NA	NA	NA	NA	NA
WP_063919295.1|1503910_1504708_-	nicotianamine synthase	NA	NA	NA	NA	NA
WP_063919296.1|1504695_1505481_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.2	4.0e-10
WP_063919297.1|1505477_1506518_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_049239999.1|1506520_1507612_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004931482.1|1507982_1508867_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 2
NZ_CP016948	Serratia surfactantfaciens strain YD25 chromosome, complete genome	5117644	1538688	1587213	5117644	holin,capsid,integrase,terminase,tRNA	Salmonella_phage(29.17%)	63	1538512:1538528	1580179:1580195
1538512:1538528	attL	CATGTGATCTGTCGTGT	NA	NA	NA	NA
WP_084799130.1|1538688_1539891_+|integrase	site-specific integrase	integrase	A0A1P8DTG6	Proteus_phage	58.6	2.3e-134
WP_071891971.1|1539854_1540103_-	hypothetical protein	NA	A0A1P8DTG1	Proteus_phage	53.0	1.6e-13
WP_156785412.1|1540776_1541529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063919308.1|1541506_1541743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063919309.1|1541742_1541967_-	hypothetical protein	NA	R9VX58	Serratia_phage	90.5	1.4e-32
WP_063919310.1|1541963_1542392_-	HNH endonuclease	NA	C6ZR29	Salmonella_phage	74.0	8.6e-52
WP_063919311.1|1542375_1543107_-	hypothetical protein	NA	A0A077KCB2	Edwardsiella_phage	54.2	1.0e-68
WP_063919312.1|1543515_1544088_-	hypothetical protein	NA	A0A220NRQ7	Escherichia_phage	66.0	7.8e-08
WP_063919313.1|1544071_1544911_-	hypothetical protein	NA	K7PKM7	Enterobacterial_phage	55.2	4.6e-73
WP_154582428.1|1544914_1545058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063919314.1|1545683_1546229_-	hypothetical protein	NA	K4I3T6	Salmonella_phage	45.5	2.0e-32
WP_064505240.1|1546246_1546405_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	52.3	1.3e-05
WP_046687497.1|1546445_1546646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071883875.1|1547155_1547749_-	helix-turn-helix domain-containing protein	NA	Q76H56	Enterobacteria_phage	59.2	1.2e-14
WP_041033757.1|1547859_1548072_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	75.4	1.4e-23
WP_041033759.1|1548097_1548388_+	hypothetical protein	NA	I6PCV6	Cronobacter_phage	44.0	7.2e-10
WP_060452900.1|1548521_1548704_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_063919315.1|1548700_1549615_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	46.0	1.1e-51
WP_063919316.1|1549611_1550331_+	DNA replication protein	NA	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	49.3	7.7e-45
WP_063919317.1|1550327_1551302_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	40.9	8.8e-68
WP_060431732.1|1551298_1551493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063919318.1|1551489_1552314_+	antitermination protein	NA	M9NZB0	Enterobacteria_phage	53.1	2.2e-72
WP_063919319.1|1552578_1552884_+|holin	holin	holin	F1C5D1	Cronobacter_phage	79.8	1.3e-38
WP_063919320.1|1552880_1553321_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	66.4	3.3e-46
WP_063919321.1|1553317_1553851_+	DUF2570 domain-containing protein	NA	K7P6W1	Enterobacteria_phage	53.3	1.2e-31
WP_156785413.1|1553899_1554307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063919323.1|1554449_1555100_+	hypothetical protein	NA	I6S676	Salmonella_phage	74.3	2.5e-87
WP_063919324.1|1555131_1555587_+	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	80.7	4.0e-63
WP_063919325.1|1555583_1556831_+|terminase	PBSX family phage terminase large subunit	terminase	I6RSK1	Salmonella_phage	95.6	7.5e-213
WP_063919326.1|1556852_1558181_+	DUF1073 domain-containing protein	NA	I6R9A1	Salmonella_phage	76.9	4.1e-201
WP_063919327.1|1558164_1559091_+|capsid	minor capsid protein	capsid	H2BD79	Pseudomonas_phage	61.8	3.1e-107
WP_063919328.1|1559094_1560360_+	hypothetical protein	NA	Q5G8Y2	Enterobacteria_phage	78.1	2.8e-191
WP_063919329.1|1560371_1560818_+	hypothetical protein	NA	A0A1V0E5Q8	Salmonella_phage	87.2	6.0e-64
WP_063919330.1|1560835_1561912_+	hypothetical protein	NA	A0A1V0E5P6	Salmonella_phage	91.1	3.5e-190
WP_060429454.1|1561921_1562215_+	hypothetical protein	NA	A0A1V0E5P8	Salmonella_phage	78.4	8.3e-38
WP_063919331.1|1562281_1562680_+	hypothetical protein	NA	G0ZNE1	Cronobacter_phage	84.0	2.8e-60
WP_063919332.1|1562851_1563199_+	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	59.1	1.1e-33
WP_060660826.1|1563201_1563600_+	HK97 gp10 family phage protein	NA	A0A291AXD9	Shigella_phage	56.8	8.1e-36
WP_063919333.1|1563596_1563980_+	hypothetical protein	NA	F1C5E4	Cronobacter_phage	49.6	1.2e-31
WP_063919334.1|1564040_1564790_+	Ig domain-containing protein	NA	G0ZNE6	Cronobacter_phage	56.0	9.1e-65
WP_063919335.1|1564841_1565516_+	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	55.9	3.8e-62
WP_071891976.1|1565603_1565963_+	hypothetical protein	NA	A0A1V0E5N7	Salmonella_phage	54.9	1.4e-31
WP_156785450.1|1566048_1566348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_177342837.1|1566444_1566639_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_156785414.1|1566751_1566952_+	lipoprotein	NA	NA	NA	NA	NA
WP_156785415.1|1567065_1567605_+	SEL1-like repeat protein	NA	NA	NA	NA	NA
WP_063919338.1|1567663_1570879_+	tape measure protein	NA	Q5G8W8	Enterobacteria_phage	50.5	1.4e-178
WP_063919339.1|1570936_1571404_+	hypothetical protein	NA	A0A173GC35	Salmonella_phage	63.5	7.2e-52
WP_060452314.1|1571404_1571875_+	DUF1833 family protein	NA	R9TPR6	Aeromonas_phage	58.8	6.4e-48
WP_063919613.1|1571894_1572287_+	C40 family peptidase	NA	F1C5F2	Cronobacter_phage	63.9	4.2e-45
WP_063919340.1|1572246_1574739_+	hypothetical protein	NA	F1C5A7	Cronobacter_phage	55.6	4.8e-259
WP_156785416.1|1574739_1576623_+	hypothetical protein	NA	A0A1B1W279	Salmonella_phage	71.4	1.7e-11
WP_156785417.1|1576625_1577417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033637997.1|1577562_1577985_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	F1C5A6	Cronobacter_phage	55.0	3.0e-33
WP_063919341.1|1577984_1579253_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	71.3	1.3e-175
WP_063919342.1|1579249_1579957_-	SOS response-associated peptidase family protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	53.9	4.1e-67
WP_025159696.1|1580224_1582153_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.7	3.5e-132
1580179:1580195	attR	CATGTGATCTGTCGTGT	NA	NA	NA	NA
WP_048233542.1|1582156_1582708_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.7	2.6e-16
WP_004931418.1|1582806_1583004_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_004931417.1|1583048_1583405_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_154746122.1|1583471_1583567_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_025159697.1|1583827_1584811_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.9	2.2e-34
WP_019456029.1|1584825_1587213_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	24.0	3.1e-05
>prophage 3
NZ_CP016948	Serratia surfactantfaciens strain YD25 chromosome, complete genome	5117644	2847699	2868900	5117644	holin,tail	Klebsiella_phage(22.22%)	23	NA	NA
WP_084799160.1|2847699_2849436_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A1I9SF20	Klebsiella_phage	46.2	9.0e-31
WP_063919760.1|2849432_2850593_-|tail	tail fiber domain-containing protein	tail	A0A1V0E5M2	Salmonella_phage	59.6	1.0e-46
WP_156785430.1|2850718_2851351_-	hypothetical protein	NA	G8C7R6	Escherichia_phage	33.8	2.4e-26
WP_063919761.1|2851661_2854829_-	host specificity protein J	NA	F1C571	Cronobacter_phage	66.8	0.0e+00
WP_063919762.1|2854882_2855509_-|tail	tail assembly protein	tail	F1C572	Cronobacter_phage	53.2	3.1e-50
WP_019453668.1|2855551_2855902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063919763.1|2855939_2856644_-	C40 family peptidase	NA	K7PGR2	Enterobacteria_phage	75.3	3.7e-108
WP_063919764.1|2856653_2857403_-|tail	phage minor tail protein L	tail	K7PGX3	Enterobacteria_phage	64.9	7.7e-96
WP_004935824.1|2857415_2857754_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	60.0	1.1e-33
WP_063919765.1|2857753_2860087_-	hypothetical protein	NA	Q6UAW7	Klebsiella_phage	50.8	1.4e-23
WP_025160180.1|2860318_2860684_-|tail	phage tail protein	tail	Q7Y401	Yersinia_phage	45.0	6.5e-24
WP_016926946.1|2860807_2861263_-|tail	major tail shaft subunit	tail	Q6UAX0	Klebsiella_phage	74.8	1.2e-56
WP_063919766.1|2861303_2861696_-	hypothetical protein	NA	Q7Y404	Yersinia_phage	45.2	6.1e-20
WP_063919767.1|2861692_2862082_-	hypothetical protein	NA	Q7Y405	Yersinia_phage	42.9	2.2e-25
WP_019453677.1|2862139_2862580_-	lysozyme	NA	A0A0M5M782	Salmonella_phage	62.3	4.4e-43
WP_019453678.1|2862566_2862887_-|holin	phage holin family protein	holin	F1C5D1	Cronobacter_phage	81.0	2.5e-40
WP_019453679.1|2863889_2864252_-	antitermination protein Q	NA	A0A0P0ZCW0	Stx2-converting_phage	64.6	1.6e-38
WP_019453680.1|2864494_2865172_+	hypothetical protein	NA	K7PK07	Enterobacteria_phage	44.6	6.0e-07
WP_019453681.1|2865595_2865925_-	osmotically-inducible lipoprotein OsmE	NA	NA	NA	NA	NA
WP_063919768.1|2866052_2866520_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_063919769.1|2866627_2867206_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019453684.1|2867199_2867616_-	VOC family protein	NA	NA	NA	NA	NA
WP_025160179.1|2867769_2868900_-	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	53.3	5.7e-103
