assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	1	42069-42219	1	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TGGCGGTAAGCCAGAAATCTTTGATTTCGCAGACGCACCCCTGCCA	46	1	41	42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173|42115-42173	NZ_CP014699.1_49790-49732|NZ_CP014699.1_291821-291763|NZ_CP014699.1_595852-595794|NZ_CP014699.1_1457956-1457898|NZ_CP014699.1_203339-203397|NZ_CP014699.1_404639-404697|NZ_CP014699.1_1049695-1049753|NZ_CP014699.1_1756801-1756859|NZ_CP014699.1_175330-175272|NZ_CP014699.1_175435-175377|NZ_CP014699.1_175540-175482|NZ_CP014699.1_238171-238113|NZ_CP014699.1_467299-467241|NZ_CP014699.1_595957-595899|NZ_CP014699.1_799250-799192|NZ_CP014699.1_1236190-1236132|NZ_CP014699.1_1236294-1236236|NZ_CP014699.1_1236399-1236341|NZ_CP014699.1_1236503-1236445|NZ_CP014699.1_1311239-1311181|NZ_CP014699.1_1427503-1427445|NZ_CP014699.1_105442-105500|NZ_CP014699.1_931066-931124|NZ_CP014699.1_1104526-1104584|NZ_CP014699.1_1127757-1127815|NZ_CP014699.1_1995521-1995579|NZ_CP014699.1_50050-49992|NZ_CP014699.1_586376-586318|NZ_CP014699.1_586481-586423|NZ_CP014699.1_595747-595689|NZ_CP014699.1_695343-695285|NZ_CP014699.1_903264-903206|NZ_CP014699.1_1236086-1236028|NZ_CP014699.1_1427398-1427340|NZ_CP014699.1_1857258-1857200|NZ_CP014699.1_200554-200612|NZ_CP014699.1_499824-499882|NZ_CP014699.1_1104631-1104689|NZ_CP014699.1_1266004-1266062|NZ_CP014699.1_1346796-1346854|NZ_CP014699.1_1478406-1478464	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|183aa|up_9|NZ_CP014699.1_31207_31756_+,NA|142aa|up_5|NZ_CP014699.1_36185_36611_+,NA|285aa|down_5|NZ_CP014699.1_46845_47700_+	NA|183aa|up_9|NZ_CP014699.1_31207_31756_+	NA	NA|581aa|up_8|NZ_CP014699.1_31777_33520_+	pfam09254, Endonuc-FokI_C, Restriction endonuclease FokI, C terminal	NA|648aa|up_7|NZ_CP014699.1_33530_35474_-	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|98aa|up_6|NZ_CP014699.1_35782_36076_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|up_5|NZ_CP014699.1_36185_36611_+	NA	NA|217aa|up_4|NZ_CP014699.1_36719_37370_+	pfam13780, DUF4176, Domain of unknown function (DUF4176)	NA|163aa|up_3|NZ_CP014699.1_37629_38118_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|165aa|up_2|NZ_CP014699.1_38898_39393_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|536aa|up_1|NZ_CP014699.1_39494_41102_+	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism]	NA|161aa|up_0|NZ_CP014699.1_41168_41651_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|306aa|down_0|NZ_CP014699.1_42687_43605_-	PRK02463, PRK02463, OxaA-like protein precursor; Provisional	NA|93aa|down_1|NZ_CP014699.1_43687_43966_-	PRK14434, PRK14434, acylphosphatase; Provisional	NA|248aa|down_2|NZ_CP014699.1_44573_45317_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|168aa|down_3|NZ_CP014699.1_45353_45857_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|230aa|down_4|NZ_CP014699.1_45873_46563_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|285aa|down_5|NZ_CP014699.1_46845_47700_+	NA	NA|536aa|down_6|NZ_CP014699.1_47712_49320_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|415aa|down_7|NZ_CP014699.1_50265_51510_+	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|81aa|down_8|NZ_CP014699.1_51687_51930_+	COG3763, COG3763, Uncharacterized protein conserved in bacteria [Function unknown]	NA|267aa|down_9|NZ_CP014699.1_52650_53451_+	PRK00865, PRK00865, glutamate racemase; Provisional
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	2	163523-163673	2	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TGGCAGAGGTGCGTCTGCGAAATCGCAGATTTCGGACTTACCGTCA	46	1	1	163569-163627	NZ_CP014699.1_1564864-1564806	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|70aa|up_1|NZ_CP014699.1_161782_161992_+,NA	NA|97aa|up_9|NZ_CP014699.1_153413_153704_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|168aa|up_8|NZ_CP014699.1_153718_154222_+	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|80aa|up_7|NZ_CP014699.1_154506_154746_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|228aa|up_6|NZ_CP014699.1_154955_155639_-	COG4858, COG4858, Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]	NA|315aa|up_5|NZ_CP014699.1_155738_156683_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|942aa|up_4|NZ_CP014699.1_156944_159770_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|219aa|up_3|NZ_CP014699.1_159997_160654_+	pfam18753, Nmad2, Nucleotide modification associated domain 2	NA|270aa|up_2|NZ_CP014699.1_160742_161552_+	pfam18754, Nmad3, Nucleotide modification associated domain 3	NA|70aa|up_1|NZ_CP014699.1_161782_161992_+	NA	NA|355aa|up_0|NZ_CP014699.1_162112_163177_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|156aa|down_0|NZ_CP014699.1_163721_164189_+	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|187aa|down_1|NZ_CP014699.1_164266_164827_+	PRK00529, PRK00529, elongation factor P; Validated	NA|130aa|down_2|NZ_CP014699.1_164859_165249_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|149aa|down_3|NZ_CP014699.1_165241_165688_+	PRK00202, nusB, transcription antitermination factor NusB	NA|488aa|down_4|NZ_CP014699.1_166458_167922_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|322aa|down_5|NZ_CP014699.1_168039_169005_-	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|486aa|down_6|NZ_CP014699.1_168985_170443_-	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|638aa|down_7|NZ_CP014699.1_170636_172550_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|294aa|down_8|NZ_CP014699.1_172947_173829_+	pfam00480, ROK, ROK family	NA|259aa|down_9|NZ_CP014699.1_173973_174750_+	COG1737, RpiR, Transcriptional regulators [Transcription]
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	3	473601-473760	3	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGAAATCAAAGATTTCGGACTTACCGCCAGCCGTAAACGTCTGAAGGCTTTGTCG	55	1	1	473656-473705	NZ_CP014699.1_1438037-1437988	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|57aa|up_9|NZ_CP014699.1_464595_464766_-,NA	NA|57aa|up_9|NZ_CP014699.1_464595_464766_-	NA	NA|186aa|up_8|NZ_CP014699.1_464944_465502_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|293aa|up_7|NZ_CP014699.1_465796_466675_+	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only]	NA|72aa|up_6|NZ_CP014699.1_467499_467715_+	PRK13672, PRK13672, hypothetical protein; Provisional	NA|280aa|up_5|NZ_CP014699.1_467730_468570_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|327aa|up_4|NZ_CP014699.1_468947_469928_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|185aa|up_3|NZ_CP014699.1_470257_470812_+	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily	NA|165aa|up_2|NZ_CP014699.1_471152_471647_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|136aa|up_1|NZ_CP014699.1_471630_472038_+	cd14265, UDPK_IM_like, Integral membrane undecaprenol kinase and similar enzymes	NA|300aa|up_0|NZ_CP014699.1_472347_473247_+	PRK00089, era, GTPase Era; Reviewed	NA|175aa|down_0|NZ_CP014699.1_474400_474925_+	pfam04978, DUF664, Protein of unknown function (DUF664)	NA|274aa|down_1|NZ_CP014699.1_474938_475760_+	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|200aa|down_2|NZ_CP014699.1_475756_476356_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|398aa|down_3|NZ_CP014699.1_476434_477628_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|49aa|down_4|NZ_CP014699.1_477624_477771_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|79aa|down_5|NZ_CP014699.1_477815_478052_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|774aa|down_6|NZ_CP014699.1_478628_480950_+	TIGR02063, Ribonuclease_R, ribonuclease R	NA|154aa|down_7|NZ_CP014699.1_480949_481411_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|462aa|down_8|NZ_CP014699.1_481508_482894_-	cd04434, LanC_like, Cyclases involved in the biosynthesis of lantibiotics, and similar proteins	NA|331aa|down_9|NZ_CP014699.1_482894_483887_-	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	4	499674-499823	4	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGCGGTAAGCCAGAAATCTTCGATTTCGTAGGCGCACCCCTGCCA	45	1	4	499719-499778|499719-499778|499719-499778|499719-499778	NZ_CP014699.1_500151-500210|NZ_CP014699.1_226534-226475|NZ_CP014699.1_381325-381266|NZ_CP014699.1_1775848-1775907	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|208aa|up_9|NZ_CP014699.1_491334_491958_+,NA|70aa|up_8|NZ_CP014699.1_491948_492158_+,NA|204aa|up_7|NZ_CP014699.1_492260_492872_+,NA|98aa|up_5|NZ_CP014699.1_494304_494598_+,NA	NA|208aa|up_9|NZ_CP014699.1_491334_491958_+	NA	NA|70aa|up_8|NZ_CP014699.1_491948_492158_+	NA	NA|204aa|up_7|NZ_CP014699.1_492260_492872_+	NA	NA|454aa|up_6|NZ_CP014699.1_492887_494249_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|98aa|up_5|NZ_CP014699.1_494304_494598_+	NA	NA|88aa|up_4|NZ_CP014699.1_494742_495006_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|148aa|up_3|NZ_CP014699.1_495056_495500_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|626aa|up_2|NZ_CP014699.1_495712_497590_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|490aa|up_1|NZ_CP014699.1_497586_499056_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|131aa|up_0|NZ_CP014699.1_499111_499504_-	cd16358, GlxI_Ni, Glyoxalase I that uses Ni(++) as cofactor	NA|226aa|down_0|NZ_CP014699.1_500300_500978_-	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|243aa|down_1|NZ_CP014699.1_501178_501907_-	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|284aa|down_2|NZ_CP014699.1_503334_504186_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|469aa|down_3|NZ_CP014699.1_504259_505666_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|250aa|down_4|NZ_CP014699.1_505665_506415_+	cd10805, YdjC_like_1, uncharacterized YdjC-like family proteins from bacteria	NA|362aa|down_5|NZ_CP014699.1_506605_507691_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|334aa|down_6|NZ_CP014699.1_507910_508912_+	TIGR01481, catabolite_control_protein_A, catabolite control protein A	NA|489aa|down_7|NZ_CP014699.1_509005_510472_+	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	NA|333aa|down_8|NZ_CP014699.1_510849_511848_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|448aa|down_9|NZ_CP014699.1_511849_513193_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	5	543323-543478	5	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGTTCTGGCAGGGGTGCGTCTGCGAAATCAGAGATTTCGGACTTACCGCCA	51	1	27	543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427|543374-543427	NZ_CP014699.1_203397-203344|NZ_CP014699.1_404697-404644|NZ_CP014699.1_1049753-1049700|NZ_CP014699.1_1756859-1756806|NZ_CP014699.1_49732-49785|NZ_CP014699.1_291763-291816|NZ_CP014699.1_595794-595847|NZ_CP014699.1_668819-668872|NZ_CP014699.1_1457898-1457951|NZ_CP014699.1_105500-105447|NZ_CP014699.1_931124-931071|NZ_CP014699.1_1104584-1104531|NZ_CP014699.1_1127815-1127762|NZ_CP014699.1_1995579-1995526|NZ_CP014699.1_175272-175325|NZ_CP014699.1_175377-175430|NZ_CP014699.1_175482-175535|NZ_CP014699.1_238113-238166|NZ_CP014699.1_467241-467294|NZ_CP014699.1_595899-595952|NZ_CP014699.1_799192-799245|NZ_CP014699.1_1236132-1236185|NZ_CP014699.1_1236236-1236289|NZ_CP014699.1_1236341-1236394|NZ_CP014699.1_1236445-1236498|NZ_CP014699.1_1311181-1311234|NZ_CP014699.1_1427445-1427498	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|50aa|up_2|NZ_CP014699.1_540270_540420_-,NA|109aa|down_8|NZ_CP014699.1_549806_550133_-	NA|229aa|up_9|NZ_CP014699.1_530823_531510_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1180aa|up_8|NZ_CP014699.1_531517_535057_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|266aa|up_7|NZ_CP014699.1_535195_535993_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|274aa|up_6|NZ_CP014699.1_535996_536818_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|509aa|up_5|NZ_CP014699.1_536820_538347_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|272aa|up_4|NZ_CP014699.1_538445_539261_-	COG3689, COG3689, Predicted membrane protein [Function unknown]	NA|301aa|up_3|NZ_CP014699.1_539260_540163_-	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|50aa|up_2|NZ_CP014699.1_540270_540420_-	NA	NA|711aa|up_1|NZ_CP014699.1_540707_542840_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|144aa|up_0|NZ_CP014699.1_542826_543258_+	PRK04351, PRK04351, SprT family protein	NA|91aa|down_0|NZ_CP014699.1_543595_543868_+	pfam04024, PspC, PspC domain	NA|312aa|down_1|NZ_CP014699.1_544143_545079_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|262aa|down_2|NZ_CP014699.1_545071_545857_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|144aa|down_3|NZ_CP014699.1_545881_546313_+	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]	NA|158aa|down_4|NZ_CP014699.1_546315_546789_+	pfam12732, YtxH, YtxH-like protein	NA|95aa|down_5|NZ_CP014699.1_546814_547099_-	pfam11674, DUF3270, Protein of unknown function (DUF3270)	NA|309aa|down_6|NZ_CP014699.1_547414_548341_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|429aa|down_7|NZ_CP014699.1_548449_549736_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|109aa|down_8|NZ_CP014699.1_549806_550133_-	NA	NA|73aa|down_9|NZ_CP014699.1_550253_550472_+	COG4443, COG4443, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	6	881156-881314	6	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CTAGTCGTCCTGGCAGAGGTGCGTCTGCGAAATCAGAGATTTCGGACTTACCGC	54	1	2	881210-881260|881210-881260	NZ_CP014699.1_85014-85064|NZ_CP014699.1_1775908-1775858	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|58aa|up_8|NZ_CP014699.1_872229_872403_+,NA|172aa|up_4|NZ_CP014699.1_876266_876782_+,NA|100aa|up_2|NZ_CP014699.1_878187_878487_+,NA|173aa|up_1|NZ_CP014699.1_878501_879020_+,NA|91aa|down_2|NZ_CP014699.1_883805_884078_+	NA|480aa|up_9|NZ_CP014699.1_870595_872035_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|58aa|up_8|NZ_CP014699.1_872229_872403_+	NA	NA|213aa|up_7|NZ_CP014699.1_872730_873369_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|96aa|up_6|NZ_CP014699.1_873393_873681_+	COG3937, COG3937, Uncharacterized conserved protein [Function unknown]	NA|527aa|up_5|NZ_CP014699.1_874266_875847_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|172aa|up_4|NZ_CP014699.1_876266_876782_+	NA	NA|449aa|up_3|NZ_CP014699.1_876785_878132_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|100aa|up_2|NZ_CP014699.1_878187_878487_+	NA	NA|173aa|up_1|NZ_CP014699.1_878501_879020_+	NA	NA|461aa|up_0|NZ_CP014699.1_879155_880538_+	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|569aa|down_0|NZ_CP014699.1_881376_883083_+	pfam09818, ABC_ATPase, Predicted ATPase of the ABC class	NA|185aa|down_1|NZ_CP014699.1_883250_883805_+	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|91aa|down_2|NZ_CP014699.1_883805_884078_+	NA	NA|231aa|down_3|NZ_CP014699.1_884108_884801_+	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|221aa|down_4|NZ_CP014699.1_884935_885598_-	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|310aa|down_5|NZ_CP014699.1_885727_886657_+	cd01137, PsaA, Metal binding protein PsaA	NA|241aa|down_6|NZ_CP014699.1_886939_887662_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|278aa|down_7|NZ_CP014699.1_887665_888499_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|298aa|down_8|NZ_CP014699.1_888572_889466_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|321aa|down_9|NZ_CP014699.1_889678_890641_+	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	7	904824-904974	7	CRISPRCasFinder	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TGGCAGAGGTGCGCCTGCGAAATCATAGATTTCTGGCTTACCGTCA	46	1	2	904870-904928|904870-904928	NZ_CP014699.1_196903-196961|NZ_CP014699.1_668819-668877	NA	1	1	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|73aa|up_9|NZ_CP014699.1_895274_895493_+,NA|172aa|up_8|NZ_CP014699.1_895697_896213_+,NA|108aa|up_6|NZ_CP014699.1_897801_898125_+,NA|171aa|up_2|NZ_CP014699.1_901103_901616_+,NA|46aa|down_4|NZ_CP014699.1_910163_910301_+	NA|73aa|up_9|NZ_CP014699.1_895274_895493_+	NA	NA|172aa|up_8|NZ_CP014699.1_895697_896213_+	NA	NA|454aa|up_7|NZ_CP014699.1_896203_897565_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|108aa|up_6|NZ_CP014699.1_897801_898125_+	NA	NA|106aa|up_5|NZ_CP014699.1_898350_898668_+	PRK09590, celB, PTS cellobiose transporter subunit IIB	NA|662aa|up_4|NZ_CP014699.1_898719_900705_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|111aa|up_3|NZ_CP014699.1_900710_901043_+	PRK09591, celC, PTS cellobiose transporter subunit IIA	NA|171aa|up_2|NZ_CP014699.1_901103_901616_+	NA	NA|451aa|up_1|NZ_CP014699.1_901658_903011_+	PRK09592, celD, PTS cellobiose transporter subunit IIC	NA|365aa|up_0|NZ_CP014699.1_903379_904474_+	pfam05913, DUF871, Bacterial protein of unknown function (DUF871)	NA|481aa|down_0|NZ_CP014699.1_905372_906815_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|279aa|down_1|NZ_CP014699.1_907147_907984_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|205aa|down_2|NZ_CP014699.1_908018_908633_+	cd01841, NnaC_like, NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases	NA|279aa|down_3|NZ_CP014699.1_908707_909544_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|46aa|down_4|NZ_CP014699.1_910163_910301_+	NA	NA|200aa|down_5|NZ_CP014699.1_910307_910907_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|480aa|down_6|NZ_CP014699.1_911761_913201_+	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|374aa|down_7|NZ_CP014699.1_913332_914454_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|276aa|down_8|NZ_CP014699.1_914504_915332_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|227aa|down_9|NZ_CP014699.1_915565_916246_+	PRK00024, PRK00024, DNA repair protein RadC
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	8	1192694-1194574	8,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E,Type II-A,Type II-C,Type II-B	GTTTTGGAACCATTCAAAACAACACAGCTCTAAAAC,GTTTTGGAACCATTCAAAACAACACAGCTCTAAAAC,GTTTTGGAACCATTCAAAACAACACAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	28,28,19	28	TypeI-E,TypeII-A,TypeII-C,TypeII-B	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA|112aa|up_4|NZ_CP014699.1_1188593_1188929_-,NA|57aa|up_0|NZ_CP014699.1_1191666_1191837_-,NA	NA|94aa|up_9|NZ_CP014699.1_1182562_1182844_-	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|169aa|up_8|NZ_CP014699.1_1183146_1183653_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|204aa|up_7|NZ_CP014699.1_1183674_1184286_-	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|669aa|up_6|NZ_CP014699.1_1184292_1186299_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|609aa|up_5|NZ_CP014699.1_1186575_1188402_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|112aa|up_4|NZ_CP014699.1_1188593_1188929_-	NA	NA|82aa|up_3|NZ_CP014699.1_1189103_1189349_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|154aa|up_2|NZ_CP014699.1_1189657_1190119_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|140aa|up_1|NZ_CP014699.1_1190458_1190878_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|57aa|up_0|NZ_CP014699.1_1191666_1191837_-	NA	csn2|222aa|down_0|NZ_CP014699.1_1194789_1195455_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|down_1|NZ_CP014699.1_1195441_1195786_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NZ_CP014699.1_1195782_1196652_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1373aa|down_3|NZ_CP014699.1_1196648_1200767_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|222aa|down_4|NZ_CP014699.1_1201663_1202329_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_5|NZ_CP014699.1_1202303_1203077_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|245aa|down_6|NZ_CP014699.1_1203531_1204266_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|377aa|down_7|NZ_CP014699.1_1204272_1205403_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|200aa|down_8|NZ_CP014699.1_1205528_1206128_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|188aa|down_9|NZ_CP014699.1_1206124_1206688_+	pfam02525, Flavodoxin_2, Flavodoxin-like fold
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	9	1207009-1207646	9,2,2	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E,Type II-A,Type II-C,Type II-B	GGATCACCCCCGCGTGTGCGGGTAAAAT,GGATCACCCCCGCGTGTGCGGGTAAAAT,GGATCACCCCCGCGTGTGCGGGTAAAAT	28,28,28	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	10,10,9	10	TypeI-E,TypeII-A,TypeII-C,TypeII-B	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	csn2|222aa|up_9|NZ_CP014699.1_1194789_1195455_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|115aa|up_8|NZ_CP014699.1_1195441_1195786_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|up_7|NZ_CP014699.1_1195782_1196652_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1373aa|up_6|NZ_CP014699.1_1196648_1200767_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|222aa|up_5|NZ_CP014699.1_1201663_1202329_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|up_4|NZ_CP014699.1_1202303_1203077_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|245aa|up_3|NZ_CP014699.1_1203531_1204266_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|377aa|up_2|NZ_CP014699.1_1204272_1205403_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|200aa|up_1|NZ_CP014699.1_1205528_1206128_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|188aa|up_0|NZ_CP014699.1_1206124_1206688_+	pfam02525, Flavodoxin_2, Flavodoxin-like fold	DEDDh|301aa|down_0|NZ_CP014699.1_1207669_1208572_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|314aa|down_1|NZ_CP014699.1_1208573_1209515_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|215aa|down_2|NZ_CP014699.1_1209517_1210162_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|243aa|down_3|NZ_CP014699.1_1210164_1210893_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|359aa|down_4|NZ_CP014699.1_1210908_1211985_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|199aa|down_5|NZ_CP014699.1_1211974_1212571_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|556aa|down_6|NZ_CP014699.1_1212583_1214251_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|926aa|down_7|NZ_CP014699.1_1214256_1217034_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|451aa|down_8|NZ_CP014699.1_1218877_1220230_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|319aa|down_9|NZ_CP014699.1_1220284_1221241_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_001642085.1_ASM164208v1	NZ_CP014699	Streptococcus pantholopis strain TA 26 chromosome, complete genome	10	1486599-1486853	3	PILER-CR	no		cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TCTTTTTCACGAAGAGTTTAGGCCGTGTTCAGTTCACCAAGATACAAAGGCCGTTTAAA	59	2	16	1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486663-1486714|1486779-1486839|1486779-1486839|1486779-1486839|1486779-1486839|1486779-1486839|1486779-1486839	NZ_CP014699.1_52496-52445|NZ_CP014699.1_250398-250347|NZ_CP014699.1_404468-404519|NZ_CP014699.1_427036-426985|NZ_CP014699.1_469920-469971|NZ_CP014699.1_1258885-1258936|NZ_CP014699.1_1258997-1259048|NZ_CP014699.1_1259109-1259160|NZ_CP014699.1_1477651-1477702|NZ_CP014699.1_1511766-1511817|NZ_CP014699.1_530463-530403|NZ_CP014699.1_1453581-1453521|NZ_CP014699.1_1453696-1453636|NZ_CP014699.1_1538488-1538548|NZ_CP014699.1_1056971-1057031|NZ_CP014699.1_81229-81169	NA	2	2	Orphan	cas3,DinG,WYL,csa3,csn2,cas2,cas1,cas9,DEDDh,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|414aa|down_2|NZ_CP014699.1_1489508_1490750_-,NA|200aa|down_4|NZ_CP014699.1_1491445_1492045_-,NA|76aa|down_8|NZ_CP014699.1_1495922_1496150_-,NA|112aa|down_9|NZ_CP014699.1_1496149_1496485_-	NA|324aa|up_9|NZ_CP014699.1_1478810_1479782_-	TIGR00744, Glucokinase_Glucose_kinase	NA|72aa|up_8|NZ_CP014699.1_1479778_1479994_-	pfam06014, DUF910, Bacterial protein of unknown function (DUF910)	NA|242aa|up_7|NZ_CP014699.1_1480088_1480814_-	cd07423, MPP_Prp_like, Bacillus subtilis PrpE and related proteins, metallophosphatase domain	NA|176aa|up_6|NZ_CP014699.1_1480900_1481428_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|220aa|up_5|NZ_CP014699.1_1481542_1482202_+	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain	NA|263aa|up_4|NZ_CP014699.1_1482248_1483037_-	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|406aa|up_3|NZ_CP014699.1_1483033_1484251_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|194aa|up_2|NZ_CP014699.1_1484247_1484829_-	PRK01222, PRK01222, phosphoribosylanthranilate isomerase	NA|256aa|up_1|NZ_CP014699.1_1484815_1485583_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|335aa|up_0|NZ_CP014699.1_1485579_1486584_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|200aa|down_0|NZ_CP014699.1_1486977_1487577_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|452aa|down_1|NZ_CP014699.1_1487573_1488929_-	PRK13570, PRK13570, anthranilate synthase component I; Provisional	NA|414aa|down_2|NZ_CP014699.1_1489508_1490750_-	NA	NA|199aa|down_3|NZ_CP014699.1_1490805_1491402_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|200aa|down_4|NZ_CP014699.1_1491445_1492045_-	NA	NA|368aa|down_5|NZ_CP014699.1_1492153_1493257_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|249aa|down_6|NZ_CP014699.1_1493256_1494003_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|299aa|down_7|NZ_CP014699.1_1494292_1495189_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|76aa|down_8|NZ_CP014699.1_1495922_1496150_-	NA	NA|112aa|down_9|NZ_CP014699.1_1496149_1496485_-	NA
