The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015516	Enterococcus hirae strain R17, complete genome	2886481	1157895	1166955	2886481		Prochlorococcus_phage(33.33%)	9	NA	NA
WP_063626987.1|1157895_1159203_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.7	4.7e-16
WP_010737435.1|1159359_1159737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063626988.1|1159998_1160715_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.9	3.7e-47
WP_010737437.1|1160729_1160984_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_063626989.1|1160985_1161657_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_063626991.1|1161658_1163881_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.6	4.0e-148
WP_063626993.1|1163865_1165308_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.9	1.1e-50
WP_063626995.1|1165321_1166365_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.2	8.3e-64
WP_010719379.1|1166361_1166955_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	34.6	1.2e-24
>prophage 2
NZ_CP015516	Enterococcus hirae strain R17, complete genome	2886481	1774608	1828924	2886481	head,terminase,protease,integrase,tail	Enterococcus_phage(23.53%)	52	1788511:1788526	1803269:1803284
WP_063627259.1|1774608_1775307_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_010737802.1|1775320_1775866_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_010718839.1|1776227_1777223_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_014834567.1|1777219_1778209_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_080292474.1|1778205_1779021_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	31.2	3.2e-15
WP_010718836.1|1779181_1780138_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_063627260.1|1780216_1780720_-	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	38.6	1.3e-19
WP_002296119.1|1780888_1781038_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_053766725.1|1781259_1781706_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_063627261.1|1781814_1783710_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.5	3.2e-21
WP_010718832.1|1784299_1785247_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	50.2	6.1e-82
WP_063627262.1|1785325_1786690_-	hypothetical protein	NA	V9QKK6	Oenococcus_phage	22.4	1.1e-07
WP_063627263.1|1786974_1787175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081248822.1|1787459_1787984_+	helix-turn-helix transcriptional regulator	NA	Q9MBT4	Staphylococcus_prophage	45.9	1.2e-18
WP_063627265.1|1788097_1788454_+	helix-turn-helix transcriptional regulator	NA	E9LUS8	Lactobacillus_phage	52.3	7.7e-22
1788511:1788526	attL	TCCGTTTAAAGATAGA	NA	NA	NA	NA
WP_155727585.1|1788745_1789276_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFG5	Streptococcus_phage	46.4	3.6e-23
WP_063627266.1|1789293_1789776_+	hypothetical protein	NA	A1BTY5	Staphylococcus_virus	33.8	6.2e-14
WP_063627267.1|1789879_1790080_+	hypothetical protein	NA	A0A097BY73	Enterococcus_phage	87.9	1.2e-24
WP_063627268.1|1790100_1790973_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_063627269.1|1791135_1792296_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	36.5	4.7e-60
WP_010737811.1|1792675_1793242_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_063627270.1|1793496_1794825_+	DUF1576 domain-containing protein	NA	NA	NA	NA	NA
WP_010718770.1|1794787_1795129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010737813.1|1795542_1796139_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	4.3e-33
WP_063627271.1|1796231_1798034_+	glycerophosphodiester phosphodiesterase	NA	A0A173GBD0	Staphylococcus_phage	27.6	2.2e-11
WP_010737815.1|1798257_1798476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627272.1|1799173_1800958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627713.1|1801424_1802276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010737819.1|1802806_1803079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010718761.1|1803292_1803706_-	DUF4231 domain-containing protein	NA	NA	NA	NA	NA
1803269:1803284	attR	TCTATCTTTAAACGGA	NA	NA	NA	NA
WP_063627273.1|1804788_1806339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627274.1|1806372_1807389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627275.1|1807640_1808621_-	hypothetical protein	NA	A0A1G5SA77	Enterococcus_phage	63.2	3.9e-55
WP_063627276.1|1808604_1808892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010719480.1|1808933_1809215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627277.1|1809371_1809725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627278.1|1810264_1810624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627279.1|1813038_1815750_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q9AZX5	Lactococcus_phage	44.1	7.3e-213
WP_034867692.1|1815746_1816487_-|tail	tail protein	tail	NA	NA	NA	NA
WP_063627714.1|1816476_1819266_-	tape measure protein	NA	I7A9A7	Enterococcus_phage	48.5	2.4e-70
WP_063627280.1|1819507_1819849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627281.1|1819848_1820466_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_010752291.1|1820466_1820844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627282.1|1821235_1821607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304501.1|1821606_1821948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311614.1|1821959_1822175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627283.1|1822197_1823088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627284.1|1823102_1823717_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_081248824.1|1823719_1823911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627285.1|1823849_1824167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063627715.1|1824168_1825047_-|head	phage head morphogenesis protein	head	NA	NA	NA	NA
WP_063627286.1|1828090_1828924_-|terminase	small subunit of terminase	terminase	D2J000	Enterococcus_phage	66.1	2.0e-81
>prophage 3
NZ_CP015516	Enterococcus hirae strain R17, complete genome	2886481	2160724	2168441	2886481		Streptococcus_phage(66.67%)	10	NA	NA
WP_002328071.1|2160724_2160985_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	52.6	6.9e-12
WP_010718684.1|2161129_2161996_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	63.0	8.6e-91
WP_010718685.1|2162537_2162882_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.4	2.9e-18
WP_010738041.1|2162874_2163699_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_010718687.1|2163734_2164676_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	32.3	3.4e-32
WP_010718688.1|2164684_2165014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010718689.1|2165028_2165673_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.2	3.5e-57
WP_010718690.1|2165736_2166333_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_010718691.1|2166356_2166668_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_034699015.1|2166692_2168441_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	41.9	9.3e-52
>prophage 1
NZ_CP015517	Enterococcus hirae strain R17 plasmid, complete sequence	73574	28638	42001	73574	transposase	Streptococcus_phage(60.0%)	17	NA	NA
WP_002354485.1|28638_29325_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_100249774.1|30137_30248_-	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	88.6	1.9e-08
WP_002321849.1|30252_30990_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	100.0	3.7e-135
WP_001814874.1|31114_31198_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_002379942.1|31419_32106_+|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	4.8e-113
WP_000242080.1|32302_33133_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000933358.1|33132_33882_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002346952.1|33874_34792_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.2	4.6e-42
WP_000395511.1|34974_35589_-	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	46.8	5.5e-07
WP_000384569.1|35578_35776_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001808810.1|35941_36106_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002379942.1|36138_36825_+|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	4.8e-113
WP_002321813.1|36935_37196_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	51.4	3.4e-11
WP_002325539.1|37561_38047_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.5	7.5e-44
WP_063627749.1|38049_38949_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002330563.1|38964_39558_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_063627750.1|39796_42001_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	51.3	1.6e-117
