The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	314927	378864	2142184	transposase,protease,tRNA	Lactococcus_phage(23.08%)	58	NA	NA
WP_024395532.1|314927_315677_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_024395533.1|315666_316428_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_024395534.1|316417_316897_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_024417537.1|316883_317450_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_002937456.1|317449_318064_+	DUF1349 domain-containing protein	NA	NA	NA	NA	NA
WP_024382018.1|318336_318768_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_024417535.1|318847_319849_+	NADP-dependent oxidoreductase	NA	A0A2P1EIJ9	Megavirus	25.7	3.7e-05
WP_024417534.1|319875_320721_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_079393979.1|320725_321583_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_024417532.1|321575_322787_+	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA	NA
WP_024417531.1|323054_323564_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024389780.1|323705_324629_+	lipase	NA	NA	NA	NA	NA
WP_024389781.1|324733_325753_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002937432.1|325974_327258_+	trigger factor	NA	NA	NA	NA	NA
WP_015646456.1|328234_329155_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_024395544.1|329188_332344_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA	NA
WP_105105193.1|332424_333775_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	3.3e-65
WP_014637475.1|333914_334496_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_024396014.1|334688_336293_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	46.6	5.8e-141
WP_002939996.1|336838_337303_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.2	2.8e-16
WP_004195761.1|337648_338530_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_001140948.1|338923_339112_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_063725164.1|345062_347081_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_105105193.1|347137_348489_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	3.3e-65
WP_014637479.1|348590_349550_-	asparaginase	NA	NA	NA	NA	NA
WP_024411010.1|349619_350465_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_024394818.1|350466_350985_+	haloacid dehalogenase	NA	A0A0H3UZF4	Geobacillus_virus	35.5	1.2e-18
WP_002939996.1|351149_351614_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.2	2.8e-16
WP_024387582.1|351756_352209_-	universal stress protein	NA	NA	NA	NA	NA
WP_014637482.1|352363_353578_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_063725165.1|353729_354518_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_024396049.1|354519_355071_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	38.7	7.3e-27
WP_011921928.1|355336_355684_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002939996.1|355893_356358_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.2	2.8e-16
WP_012774968.1|356624_357299_+	hydrolase	NA	NA	NA	NA	NA
WP_024395793.1|357515_357818_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_024395792.1|357817_359284_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_024376286.1|359283_360723_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_024389558.1|360773_361772_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	24.8	9.5e-09
WP_024395791.1|361904_363077_+	galactokinase	NA	NA	NA	NA	NA
WP_024395790.1|363086_364568_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_024395789.1|364642_365551_+	EamA family transporter	NA	NA	NA	NA	NA
WP_024395788.1|365599_366229_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_079270697.1|366457_367135_+	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA	NA
WP_023369412.1|367263_367791_+	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA	NA
WP_024395786.1|367791_368898_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
WP_004195298.1|368954_369266_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_024395785.1|369278_369911_+	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	33.8	2.6e-20
WP_014637493.1|369907_370495_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_050571566.1|370548_370659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105115398.1|370862_371165_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014637496.1|371161_371671_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_014637497.1|371672_372032_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_014637498.1|372181_372928_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_024395784.1|372924_374013_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_024395783.1|374014_374395_+	TipAS antibiotic-recognition domain-containing protein	NA	NA	NA	NA	NA
WP_063725166.1|376060_376474_+	peptide deformylase	NA	A0A2I7QLT9	Vibrio_phage	34.8	6.7e-09
WP_024395780.1|376764_378864_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.2	3.3e-120
>prophage 2
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	643216	653200	2142184	transposase	Escherichia_phage(50.0%)	8	NA	NA
WP_105105193.1|643216_644568_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	3.3e-65
WP_015646663.1|644907_645777_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	62.5	2.3e-99
WP_002937119.1|645776_646370_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	33.1	5.1e-10
WP_063725195.1|646369_646855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002937117.1|647043_648090_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.5	1.3e-69
WP_063725196.1|648143_648995_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.4	2.1e-25
WP_063725197.1|649011_650055_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_063725198.1|650092_653200_+	GBS Bsp-like repeat-containing protein	NA	M4ZRP4	Bacillus_phage	33.5	4.4e-20
>prophage 3
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	925355	935853	2142184		Streptococcus_phage(83.33%)	7	NA	NA
WP_063725248.1|925355_931277_+	DEAD/DEAH box helicase family protein	NA	A0A248SL14	Klebsiella_phage	32.3	4.2e-189
WP_024410551.1|931365_931530_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	94.9	1.8e-13
WP_013641314.1|931550_931634_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_002321849.1|931758_932496_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	100.0	3.7e-135
WP_001140406.1|932967_933342_+	TnpV protein	NA	A0A1B0RXG6	Streptococcus_phage	100.0	2.0e-68
WP_063725249.1|933708_935628_+	tetracycline resistance ribosomal protection protein Tet(O)	NA	A0A1B0RXH7	Streptococcus_phage	99.7	0.0e+00
WP_002779755.1|935679_935853_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	100.0	4.6e-28
>prophage 4
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	1042045	1049589	2142184	transposase,protease	Bacillus_phage(33.33%)	7	NA	NA
WP_002943192.1|1042045_1043878_-	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	38.8	2.2e-19
WP_063725262.1|1044103_1045360_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	56.6	3.4e-128
WP_063725263.1|1045395_1045809_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	45.2	2.3e-25
WP_014638915.1|1045831_1046419_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_002934974.1|1046474_1047701_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	1.2e-133
WP_063725264.1|1047898_1048411_-	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	35.4	1.0e-19
WP_063725265.1|1048749_1049589_-	thymidylate synthase	NA	U5J9N5	Bacillus_phage	55.0	2.5e-87
>prophage 5
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	1165293	1211685	2142184	holin,transposase,protease	Streptococcus_phage(27.27%)	40	NA	NA
WP_002943658.1|1165293_1165545_-|holin	holin	holin	NA	NA	NA	NA
WP_013730336.1|1165785_1166550_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014638052.1|1166628_1167312_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_063725277.1|1168815_1171095_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.0	4.2e-129
WP_014638055.1|1171224_1172592_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002935455.1|1172777_1173116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024395158.1|1173282_1175073_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	98.7	0.0e+00
WP_105105193.1|1175151_1176502_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	3.3e-65
WP_024395159.1|1176543_1176936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024395160.1|1177158_1178109_-	VOC family protein	NA	NA	NA	NA	NA
WP_063725278.1|1178240_1178948_-	aquaporin family protein	NA	M1HJ77	Paramecium_bursaria_Chlorella_virus	29.6	1.9e-19
WP_063725279.1|1178961_1180791_-	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA	NA
WP_063725280.1|1180866_1182381_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_044755993.1|1182609_1184073_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_063725281.1|1184062_1185415_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_024389816.1|1185888_1186824_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_011922250.1|1186896_1187973_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_024414134.1|1188141_1189236_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
WP_024395166.1|1189356_1190313_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_014638067.1|1190344_1191013_-	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.0	1.9e-21
WP_024389812.1|1191027_1193472_-	glycyl radical protein	NA	A0A2H4YEI2	Aeromonas_phage	47.2	4.9e-06
WP_024395167.1|1193623_1194925_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002935430.1|1194937_1195243_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_011922241.1|1195275_1195599_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_014638069.1|1195787_1196762_-	sugar-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_024381753.1|1196774_1197518_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_014735952.1|1197649_1198426_+	glycyl-radical enzyme activating protein	NA	NA	NA	NA	NA
WP_044675765.1|1198720_1199008_-	DUF1905 domain-containing protein	NA	NA	NA	NA	NA
WP_024395170.1|1199016_1199670_-	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_024395171.1|1199659_1200169_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_024395172.1|1200169_1200787_-	DUF5052 family protein	NA	A0A2K9VCV0	Lactobacillus_phage	51.5	4.9e-48
WP_024395173.1|1200944_1201787_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_063725282.1|1201957_1203274_-	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	40.8	7.2e-89
WP_063725283.1|1203490_1204300_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_063725284.1|1204339_1206010_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_024382938.1|1206410_1207106_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_024388884.1|1207098_1207647_+	phosphopantothenoylcysteine decarboxylase	NA	A0A068EHP1	Penguinpox_virus	36.7	1.4e-22
WP_044678669.1|1207633_1208203_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_024398331.1|1208293_1210012_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	99.5	0.0e+00
WP_172794236.1|1210392_1211685_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	96.2	9.5e-219
>prophage 6
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	1220787	1236440	2142184		Streptococcus_phage(100.0%)	16	NA	NA
WP_012775042.1|1220787_1221615_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	100.0	2.9e-152
WP_024417278.1|1221914_1222814_+	cation transporter	NA	M1Q1N9	Streptococcus_phage	99.3	2.5e-162
WP_014735973.1|1222830_1223184_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	99.1	4.2e-60
WP_014638088.1|1223167_1223674_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	100.0	2.0e-95
WP_014638089.1|1223676_1224858_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	100.0	9.2e-221
WP_014638090.1|1225231_1225789_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	100.0	2.8e-95
WP_011922200.1|1225788_1226880_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	100.0	2.4e-207
WP_002935362.1|1227235_1228099_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	99.7	2.1e-158
WP_002935361.1|1228100_1228418_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	100.0	3.1e-54
WP_014638092.1|1228437_1229322_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	100.0	1.0e-155
WP_014735979.1|1229318_1229957_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	99.5	1.1e-114
WP_002935357.1|1230131_1230998_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	99.7	4.6e-153
WP_044671016.1|1231034_1232306_-	toxic anion resistance protein	NA	M1PLC8	Streptococcus_phage	98.8	5.1e-209
WP_024416480.1|1232311_1233139_-	hypothetical protein	NA	M1PFV6	Streptococcus_phage	99.3	7.1e-135
WP_002935353.1|1233232_1233889_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	99.1	2.1e-113
WP_044756286.1|1234202_1236440_-	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	96.2	2.2e-98
>prophage 7
NZ_CP015557	Streptococcus suis strain DN13 chromosome, complete genome	2142184	1305935	1324217	2142184	transposase	Streptococcus_phage(92.86%)	15	NA	NA
WP_063725294.1|1305935_1307753_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	27.7	1.3e-24
WP_013730278.1|1307782_1308514_-	tyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_013730277.1|1308552_1309239_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	92.1	1.1e-104
WP_013730276.1|1309248_1309938_-	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	92.1	8.0e-108
WP_013730275.1|1309953_1311393_-	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	87.6	2.2e-200
WP_024406041.1|1311522_1312257_-	peroxide stress protein YaaA	NA	A0A1X9I5I0	Streptococcus_phage	95.8	1.5e-115
WP_063725295.1|1312379_1313639_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	98.8	1.6e-239
WP_024395921.1|1313737_1314589_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	98.2	2.9e-152
WP_024395920.1|1314715_1315120_+	TetR/AcrR family transcriptional regulator	NA	A0A1X9I6A2	Streptococcus_phage	98.5	7.1e-64
WP_024395919.1|1315142_1315928_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	96.6	6.3e-133
WP_024395918.1|1315937_1317176_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	97.6	1.2e-218
WP_024395917.1|1317240_1318317_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	99.4	3.9e-194
WP_024395916.1|1318478_1320992_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	99.1	0.0e+00
WP_024395915.1|1321054_1321690_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	98.6	2.1e-123
WP_024395914.1|1323053_1324217_+|transposase	IS110 family transposase	transposase	A0A1X9I5G9	Streptococcus_phage	94.4	5.6e-29
