assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001623565.1_ASM162356v1	NZ_CP015196	Streptococcus marmotae strain HTS5 chromosome, complete genome	1	271260-271424	1	CRISPRCasFinder	no	cas3	csa3,cas3,WYL,DEDDh,DinG	Unclear	CTCCTAGAAGCTTGTGCTTCTTCGTCGTATTTCCTATTTTTCATTCGCTTTTT	53	0	0	NA	NA	NA	1	1	Unclear	csa3,cas3,WYL,DEDDh,DinG	NA|122aa|up_9|NZ_CP015196.1_261128_261494_+,NA	NA|122aa|up_9|NZ_CP015196.1_261128_261494_+	NA	NA|162aa|up_8|NZ_CP015196.1_261543_262029_+	pfam11683, DUF3278, Protein of unknown function (DUF3278)	NA|146aa|up_7|NZ_CP015196.1_262087_262525_+	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|up_6|NZ_CP015196.1_262661_263639_-	PRK13387, PRK13387, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional	NA|352aa|up_5|NZ_CP015196.1_263610_264666_-	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|178aa|up_4|NZ_CP015196.1_264795_265329_-	COG4939, COG4939, Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]	NA|332aa|up_3|NZ_CP015196.1_265463_266459_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|630aa|up_2|NZ_CP015196.1_266574_268464_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|180aa|up_1|NZ_CP015196.1_268866_269406_+	pfam07456, Hpre_diP_synt_I, Heptaprenyl diphosphate synthase component I	NA|450aa|up_0|NZ_CP015196.1_269658_271008_+	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|224aa|down_0|NZ_CP015196.1_271457_272129_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|446aa|down_1|NZ_CP015196.1_272342_273680_+	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|86aa|down_2|NZ_CP015196.1_274015_274273_-	PRK02539, PRK02539, DUF896 family protein	NA|680aa|down_3|NZ_CP015196.1_274281_276321_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|306aa|down_4|NZ_CP015196.1_276322_277240_-	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated	NA|279aa|down_5|NZ_CP015196.1_278295_279132_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|234aa|down_6|NZ_CP015196.1_279283_279985_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|355aa|down_7|NZ_CP015196.1_279986_281051_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|456aa|down_8|NZ_CP015196.1_281043_282411_-	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase	NA|285aa|down_9|NZ_CP015196.1_282596_283451_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]
GCF_001623565.1_ASM162356v1	NZ_CP015196	Streptococcus marmotae strain HTS5 chromosome, complete genome	2	1229810-1229935	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG	Orphan	GTCCAGTGGACTGTTTTAGCCTCG	24	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,WYL,DEDDh,DinG	NA,NA	NA|208aa|up_9|NZ_CP015196.1_1214280_1214904_-	pfam11193, DUF2812, Protein of unknown function (DUF2812)	NA|104aa|up_8|NZ_CP015196.1_1214915_1215227_-	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family	NA|239aa|up_7|NZ_CP015196.1_1215385_1216102_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|579aa|up_6|NZ_CP015196.1_1216755_1218492_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|592aa|up_5|NZ_CP015196.1_1218500_1220276_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|379aa|up_4|NZ_CP015196.1_1222095_1223232_-	TIGR02708, lactate_oxidase, L-lactate oxidase	NA|363aa|up_3|NZ_CP015196.1_1223554_1224643_-	pfam06772, LtrA, Bacterial low temperature requirement A protein (LtrA)	NA|332aa|up_2|NZ_CP015196.1_1224672_1225668_-	cd06259, YdcF-like, YdcF-like	NA|151aa|up_1|NZ_CP015196.1_1225852_1226305_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|583aa|up_0|NZ_CP015196.1_1228056_1229805_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|146aa|down_0|NZ_CP015196.1_1230104_1230542_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|166aa|down_1|NZ_CP015196.1_1230541_1231039_+	PRK06762, PRK06762, hypothetical protein; Provisional	NA|361aa|down_2|NZ_CP015196.1_1231091_1232174_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|286aa|down_3|NZ_CP015196.1_1232489_1233347_+	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|411aa|down_4|NZ_CP015196.1_1233350_1234583_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|566aa|down_5|NZ_CP015196.1_1234560_1236258_+	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|246aa|down_6|NZ_CP015196.1_1236247_1236985_+	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]	NA|60aa|down_7|NZ_CP015196.1_1236968_1237148_+	PRK14861, tatA, twin arginine translocase protein A; Provisional	NA|348aa|down_8|NZ_CP015196.1_1237344_1238388_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|331aa|down_9|NZ_CP015196.1_1238489_1239482_+	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism]
GCF_001623565.1_ASM162356v1	NZ_CP015196	Streptococcus marmotae strain HTS5 chromosome, complete genome	3	1345092-1345169	3	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG	Orphan	CAATTGAGAATTGTGAAAGGTTGGAA	26	1	8	1345118-1345143|1345118-1345143|1345118-1345143|1345118-1345143|1345118-1345143|1345118-1345143|1345118-1345143|1345118-1345143	NZ_CP015196.1_1375615-1375640|NZ_CP015196.1_14925-14900|NZ_CP015196.1_976768-976743|NZ_CP015196.1_1325362-1325337|NZ_CP015196.1_1245445-1245470|NZ_CP015196.1_1375667-1375692|NZ_CP015196.1_2242060-2242085|NZ_CP015196.1_1386887-1386862	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,DinG	NA,NA	NA|72aa|up_9|NZ_CP015196.1_1332034_1332250_+	PRK13672, PRK13672, hypothetical protein; Provisional	NA|321aa|up_8|NZ_CP015196.1_1332392_1333355_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|419aa|up_7|NZ_CP015196.1_1334206_1335463_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|630aa|up_6|NZ_CP015196.1_1335737_1337627_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|153aa|up_5|NZ_CP015196.1_1337613_1338072_+	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	NA|105aa|up_4|NZ_CP015196.1_1338084_1338399_+	cd05569, PTS_IIB_fructose, PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|349aa|up_3|NZ_CP015196.1_1338418_1339465_+	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]	NA|426aa|up_2|NZ_CP015196.1_1339477_1340755_+	pfam08013, Tagatose_6_P_K, Tagatose 6 phosphate kinase	NA|577aa|up_1|NZ_CP015196.1_1341125_1342856_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|581aa|up_0|NZ_CP015196.1_1342852_1344595_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|466aa|down_0|NZ_CP015196.1_1346344_1347742_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|367aa|down_1|NZ_CP015196.1_1347750_1348851_+	pfam05913, DUF871, Bacterial protein of unknown function (DUF871)	NA|665aa|down_2|NZ_CP015196.1_1349007_1351002_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|104aa|down_3|NZ_CP015196.1_1351018_1351330_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|109aa|down_4|NZ_CP015196.1_1351332_1351659_+	cd00215, PTS_IIA_lac, PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit	NA|147aa|down_5|NZ_CP015196.1_1351662_1352103_+	pfam11687, DUF3284, Domain of unknown function (DUF3284)	NA|445aa|down_6|NZ_CP015196.1_1352115_1353450_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|250aa|down_7|NZ_CP015196.1_1353858_1354608_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|195aa|down_8|NZ_CP015196.1_1354600_1355185_+	pfam04892, VanZ, VanZ like family	NA|166aa|down_9|NZ_CP015196.1_1355245_1355743_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional
GCF_001623565.1_ASM162356v1	NZ_CP015196	Streptococcus marmotae strain HTS5 chromosome, complete genome	4	1493294-1493372	4	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG	Orphan	GGGACGCAGATGTTCCAACTTTAGTTG	27	1	3	1493321-1493345|1493321-1493345|1493321-1493345	NZ_CP015196.1_130715-130739|NZ_CP015196.1_277559-277583|NZ_CP015196.1_1533442-1533466	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,DinG	NA|232aa|up_9|NZ_CP015196.1_1485251_1485947_-,NA|85aa|up_6|NZ_CP015196.1_1487878_1488133_+,NA|52aa|down_1|NZ_CP015196.1_1495776_1495932_+,NA|52aa|down_2|NZ_CP015196.1_1495985_1496141_+	NA|232aa|up_9|NZ_CP015196.1_1485251_1485947_-	NA	NA|299aa|up_8|NZ_CP015196.1_1485933_1486830_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|287aa|up_7|NZ_CP015196.1_1486924_1487785_+	TIGR01716, HTH-type_transcriptional_regulator_rgg, transcriptional activator, Rgg/GadR/MutR family, C-terminal domain	NA|85aa|up_6|NZ_CP015196.1_1487878_1488133_+	NA	NA|57aa|up_5|NZ_CP015196.1_1488564_1488735_-	pfam11240, DUF3042, Protein of unknown function (DUF3042)	NA|297aa|up_4|NZ_CP015196.1_1488803_1489694_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|417aa|up_3|NZ_CP015196.1_1489690_1490941_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|209aa|up_2|NZ_CP015196.1_1490927_1491554_+	PRK05270, PRK05270, UDP-glucose--hexose-1-phosphate uridylyltransferase	NA|310aa|up_1|NZ_CP015196.1_1491564_1492494_+	TIGR02651, Ribonuclease_Z, ribonuclease Z	NA|252aa|up_0|NZ_CP015196.1_1492490_1493246_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|516aa|down_0|NZ_CP015196.1_1493879_1495427_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|52aa|down_1|NZ_CP015196.1_1495776_1495932_+	NA	NA|52aa|down_2|NZ_CP015196.1_1495985_1496141_+	NA	NA|382aa|down_3|NZ_CP015196.1_1496286_1497432_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|200aa|down_4|NZ_CP015196.1_1497701_1498301_+	pfam02517, Abi, CAAX protease self-immunity	NA|742aa|down_5|NZ_CP015196.1_1498441_1500667_+	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|171aa|down_6|NZ_CP015196.1_1500781_1501294_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|314aa|down_7|NZ_CP015196.1_1501424_1502366_+	pfam04204, HTS, Homoserine O-succinyltransferase	NA|226aa|down_8|NZ_CP015196.1_1502375_1503053_+	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair]	NA|229aa|down_9|NZ_CP015196.1_1503056_1503743_+	COG2384, COG2384, Predicted SAM-dependent methyltransferase [General function prediction only]
