assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001620005.1_ASM162000v1	NZ_CP015220	Rhodococcus sp. PBTS 2 chromosome, complete genome	1	732916-733044	1	PILER-CR	no		csa3,cas3,RT,WYL,cas4,DEDDh,DinG	Orphan	CGACGGACGGCGTCGAACGCACGCAGGCGGTGTCACGGCCG	41	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,RT,WYL,cas4,DEDDh,DinG	NA|257aa|up_8|NZ_CP015220.1_724770_725541_-,NA|435aa|up_1|NZ_CP015220.1_730594_731899_+,NA|113aa|down_5|NZ_CP015220.1_740668_741007_-,NA|74aa|down_7|NZ_CP015220.1_741664_741886_+	NA|489aa|up_9|NZ_CP015220.1_723278_724745_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|257aa|up_8|NZ_CP015220.1_724770_725541_-	NA	NA|321aa|up_7|NZ_CP015220.1_725540_726503_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|251aa|up_6|NZ_CP015220.1_726768_727521_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|72aa|up_5|NZ_CP015220.1_727513_727729_-	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|349aa|up_4|NZ_CP015220.1_727725_728772_-	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|231aa|up_3|NZ_CP015220.1_728936_729629_+	PRK00043, thiE, thiamine phosphate synthase	NA|279aa|up_2|NZ_CP015220.1_729672_730509_-	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|435aa|up_1|NZ_CP015220.1_730594_731899_+	NA	NA|324aa|up_0|NZ_CP015220.1_731895_732867_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|395aa|down_0|NZ_CP015220.1_735378_736563_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|695aa|down_1|NZ_CP015220.1_736559_738644_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|175aa|down_2|NZ_CP015220.1_738737_739262_+	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|338aa|down_3|NZ_CP015220.1_739262_740276_-	TIGR03554, F420_G6P_DH, glucose-6-phosphate dehydrogenase (coenzyme-F420)	NA|111aa|down_4|NZ_CP015220.1_740339_740672_-	COG2149, COG2149, Predicted membrane protein [Function unknown]	NA|113aa|down_5|NZ_CP015220.1_740668_741007_-	NA	NA|104aa|down_6|NZ_CP015220.1_741131_741443_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|74aa|down_7|NZ_CP015220.1_741664_741886_+	NA	NA|232aa|down_8|NZ_CP015220.1_741888_742584_-	pfam08445, FR47, FR47-like protein	NA|257aa|down_9|NZ_CP015220.1_742687_743458_+	cd01086, MetAP1, Methionine Aminopeptidase 1
GCF_001620005.1_ASM162000v1	NZ_CP015220	Rhodococcus sp. PBTS 2 chromosome, complete genome	2	1095013-1095125	1	CRISPRCasFinder	no		csa3,cas3,RT,WYL,cas4,DEDDh,DinG	Orphan	TCCTCGAAGGCGAACGGATTGTGCACGATCGA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,WYL,cas4,DEDDh,DinG	NA,NA	NA|343aa|up_9|NZ_CP015220.1_1083548_1084577_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|412aa|up_8|NZ_CP015220.1_1084802_1086038_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|328aa|up_7|NZ_CP015220.1_1086034_1087018_-	cd01148, TroA_a, Metal binding protein TroA_a	NA|281aa|up_6|NZ_CP015220.1_1087014_1087857_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|361aa|up_5|NZ_CP015220.1_1087853_1088936_-	pfam01032, FecCD, FecCD transport family	NA|221aa|up_4|NZ_CP015220.1_1089130_1089793_+	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|451aa|up_3|NZ_CP015220.1_1089802_1091155_-	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|456aa|up_2|NZ_CP015220.1_1091195_1092563_-	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|517aa|up_1|NZ_CP015220.1_1092559_1094110_-	COG2936, COG2936, Predicted acyl esterases [General function prediction only]	NA|275aa|up_0|NZ_CP015220.1_1094106_1094931_-	TIGR03882, hypothetical_protein, bacteriocin biosynthesis cyclodehydratase domain	NA|287aa|down_0|NZ_CP015220.1_1095555_1096416_+	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|287aa|down_1|NZ_CP015220.1_1096520_1097381_+	pfam12868, DUF3824, Domain of unknwon function (DUF3824)	NA|248aa|down_2|NZ_CP015220.1_1097460_1098204_+	pfam02592, Vut_1, Putative vitamin uptake transporter	NA|279aa|down_3|NZ_CP015220.1_1098200_1099037_-	COG3327, PaaX, Phenylacetic acid-responsive transcriptional repressor [Transcription]	NA|403aa|down_4|NZ_CP015220.1_1099017_1100226_-	COG3844, COG3844, Kynureninase [Amino acid transport and metabolism]	NA|436aa|down_5|NZ_CP015220.1_1101153_1102461_-	cd17368, MFS_CitA, Citrate-proton symporter of the Major Facilitator Superfamily of transporters	NA|474aa|down_6|NZ_CP015220.1_1102481_1103903_-	PRK07079, PRK07079, hypothetical protein; Provisional	NA|298aa|down_7|NZ_CP015220.1_1104081_1104975_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|126aa|down_8|NZ_CP015220.1_1105032_1105410_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|294aa|down_9|NZ_CP015220.1_1105406_1106288_+	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase
GCF_001620005.1_ASM162000v1	NZ_CP015220	Rhodococcus sp. PBTS 2 chromosome, complete genome	3	2879074-2879159	2	CRISPRCasFinder	no	WYL	csa3,cas3,RT,WYL,cas4,DEDDh,DinG	Unclear	AAGTCCACTCAACGTGACATTGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,WYL,cas4,DEDDh,DinG	NA,NA|204aa|down_4|NZ_CP015220.1_2883801_2884413_-	NA|281aa|up_9|NZ_CP015220.1_2868734_2869577_+	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|143aa|up_8|NZ_CP015220.1_2869580_2870009_-	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|335aa|up_7|NZ_CP015220.1_2870023_2871028_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|460aa|up_6|NZ_CP015220.1_2871215_2872595_+	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|517aa|up_5|NZ_CP015220.1_2872647_2874198_-	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	NA|276aa|up_4|NZ_CP015220.1_2874219_2875047_+	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|376aa|up_3|NZ_CP015220.1_2875149_2876277_+	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown]	NA|292aa|up_2|NZ_CP015220.1_2876305_2877181_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|272aa|up_1|NZ_CP015220.1_2877191_2878007_-	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]	WYL|330aa|up_0|NZ_CP015220.1_2878019_2879009_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|312aa|down_0|NZ_CP015220.1_2879223_2880159_+	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|599aa|down_1|NZ_CP015220.1_2880158_2881955_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|228aa|down_2|NZ_CP015220.1_2882062_2882746_+	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|333aa|down_3|NZ_CP015220.1_2882791_2883790_+	pfam16113, ECH_2, Enoyl-CoA hydratase/isomerase	NA|204aa|down_4|NZ_CP015220.1_2883801_2884413_-	NA	NA|218aa|down_5|NZ_CP015220.1_2884560_2885214_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|561aa|down_6|NZ_CP015220.1_2885223_2886906_-	COG4108, PrfC, Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]	NA|545aa|down_7|NZ_CP015220.1_2887035_2888670_+	PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated	NA|198aa|down_8|NZ_CP015220.1_2888670_2889264_-	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|221aa|down_9|NZ_CP015220.1_2889345_2890008_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed
GCF_001620005.1_ASM162000v1	NZ_CP015220	Rhodococcus sp. PBTS 2 chromosome, complete genome	4	5159763-5159868	3	CRISPRCasFinder	no		csa3,cas3,RT,WYL,cas4,DEDDh,DinG	Orphan	AATCTGTGCCCGAGCCGGGCGACGC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,RT,WYL,cas4,DEDDh,DinG	NA|210aa|up_6|NZ_CP015220.1_5154094_5154724_+,NA|208aa|up_5|NZ_CP015220.1_5154720_5155344_+,NA|135aa|up_3|NZ_CP015220.1_5156717_5157122_-,NA|180aa|down_1|NZ_CP015220.1_5161890_5162430_+,NA|68aa|down_2|NZ_CP015220.1_5162437_5162641_-,NA|316aa|down_6|NZ_CP015220.1_5166866_5167814_-,NA|328aa|down_7|NZ_CP015220.1_5167810_5168794_-,NA|100aa|down_8|NZ_CP015220.1_5168790_5169090_-,NA|288aa|down_9|NZ_CP015220.1_5169181_5170045_-	NA|634aa|up_9|NZ_CP015220.1_5149620_5151522_-	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|307aa|up_8|NZ_CP015220.1_5151514_5152435_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|327aa|up_7|NZ_CP015220.1_5152467_5153448_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|210aa|up_6|NZ_CP015220.1_5154094_5154724_+	NA	NA|208aa|up_5|NZ_CP015220.1_5154720_5155344_+	NA	NA|423aa|up_4|NZ_CP015220.1_5155306_5156575_-	pfam13810, DUF4185, Domain of unknown function (DUF4185)	NA|135aa|up_3|NZ_CP015220.1_5156717_5157122_-	NA	NA|111aa|up_2|NZ_CP015220.1_5157237_5157570_+	TIGR04555, probable_sulfite_oxidase_molybdopterin_subunit, sulfite dehydrogenase	NA|189aa|up_1|NZ_CP015220.1_5157594_5158161_-	PRK00150, def, peptide deformylase; Reviewed	NA|132aa|up_0|NZ_CP015220.1_5158224_5158620_+	pfam11625, DUF3253, Protein of unknown function (DUF3253)	NA|499aa|down_0|NZ_CP015220.1_5160306_5161803_-	PRK08316, PRK08316, acyl-CoA synthetase; Validated	NA|180aa|down_1|NZ_CP015220.1_5161890_5162430_+	NA	NA|68aa|down_2|NZ_CP015220.1_5162437_5162641_-	NA	NA|766aa|down_3|NZ_CP015220.1_5163037_5165335_+	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|309aa|down_4|NZ_CP015220.1_5165411_5166338_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|177aa|down_5|NZ_CP015220.1_5166339_5166870_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|316aa|down_6|NZ_CP015220.1_5166866_5167814_-	NA	NA|328aa|down_7|NZ_CP015220.1_5167810_5168794_-	NA	NA|100aa|down_8|NZ_CP015220.1_5168790_5169090_-	NA	NA|288aa|down_9|NZ_CP015220.1_5169181_5170045_-	NA
