assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001611775.1_ASM161177v1	NZ_CP015099	Glaesserella parasuis strain SC1401 chromosome, complete genome	1	2247596-2247928	1	CRISPRCasFinder	no		DEDDh,cas3,cas2,PD-DExK,DinG	Orphan	AGAGGTGAAACTGGCCCTGCGGGTCC	26	3	19	2247622-2247685|2247775-2247793|2247775-2247793|2247775-2247793|2247775-2247793|2247775-2247793|2247775-2247793|2247775-2247793|2247775-2247793|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838|2247820-2247838	NZ_CP015099.1_1151459-1151396|NZ_CP015099.1_442614-442632|NZ_CP015099.1_442830-442848|NZ_CP015099.1_1087738-1087756|NZ_CP015099.1_2217902-2217920|NZ_CP015099.1_205803-205785|NZ_CP015099.1_443136-443154|NZ_CP015099.1_1151882-1151864|NZ_CP015099.1_2157098-2157116|NZ_CP015099.1_1087549-1087567|NZ_CP015099.1_1151072-1151054|NZ_CP015099.1_1151369-1151351|NZ_CP015099.1_2217713-2217731|NZ_CP015099.1_2248117-2248135|NZ_CP015099.1_1087783-1087801|NZ_CP015099.1_1087801-1087819|NZ_CP015099.1_2157296-2157314|NZ_CP015099.1_2217947-2217965|NZ_CP015099.1_2217965-2217983	NA	5	5	Orphan	DEDDh,cas3,cas2,PD-DExK,DinG	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+,NA	NA|134aa|up_9|NZ_CP015099.1_2236564_2236966_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|359aa|up_8|NZ_CP015099.1_2236958_2238035_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|275aa|up_7|NZ_CP015099.1_2238049_2238874_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|640aa|up_6|NZ_CP015099.1_2238881_2240801_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|110aa|up_5|NZ_CP015099.1_2240926_2241256_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+	NA	NA|157aa|up_3|NZ_CP015099.1_2242304_2242775_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|289aa|up_2|NZ_CP015099.1_2242776_2243643_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|294aa|up_1|NZ_CP015099.1_2243726_2244608_+	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|396aa|up_0|NZ_CP015099.1_2244671_2245859_-	COG2081, COG2081, Predicted flavoproteins [General function prediction only]	NA|399aa|down_0|NZ_CP015099.1_2250709_2251906_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|90aa|down_1|NZ_CP015099.1_2252150_2252420_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|121aa|down_2|NZ_CP015099.1_2252413_2252776_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|297aa|down_3|NZ_CP015099.1_2252863_2253754_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|433aa|down_4|NZ_CP015099.1_2253753_2255052_+	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|106aa|down_5|NZ_CP015099.1_2255095_2255413_-	PRK05423, PRK05423, DUF496 family protein	NA|214aa|down_6|NZ_CP015099.1_2255628_2256270_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|136aa|down_7|NZ_CP015099.1_2256271_2256679_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|320aa|down_8|NZ_CP015099.1_2256857_2257817_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|712aa|down_9|NZ_CP015099.1_2257919_2260055_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed
GCF_001611775.1_ASM161177v1	NZ_CP015099	Glaesserella parasuis strain SC1401 chromosome, complete genome	2	2248046-2248117	2	CRISPRCasFinder	no		DEDDh,cas3,cas2,PD-DExK,DinG	Orphan	AGAGGTGAAACTGGCCCTGCGGGTCC	26	1	1	2248072-2248090	NZ_CP015099.1_1151459-1151441	NA	1	1	Orphan	DEDDh,cas3,cas2,PD-DExK,DinG	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+,NA	NA|134aa|up_9|NZ_CP015099.1_2236564_2236966_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|359aa|up_8|NZ_CP015099.1_2236958_2238035_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|275aa|up_7|NZ_CP015099.1_2238049_2238874_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|640aa|up_6|NZ_CP015099.1_2238881_2240801_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|110aa|up_5|NZ_CP015099.1_2240926_2241256_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+	NA	NA|157aa|up_3|NZ_CP015099.1_2242304_2242775_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|289aa|up_2|NZ_CP015099.1_2242776_2243643_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|294aa|up_1|NZ_CP015099.1_2243726_2244608_+	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|396aa|up_0|NZ_CP015099.1_2244671_2245859_-	COG2081, COG2081, Predicted flavoproteins [General function prediction only]	NA|399aa|down_0|NZ_CP015099.1_2250709_2251906_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|90aa|down_1|NZ_CP015099.1_2252150_2252420_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|121aa|down_2|NZ_CP015099.1_2252413_2252776_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|297aa|down_3|NZ_CP015099.1_2252863_2253754_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|433aa|down_4|NZ_CP015099.1_2253753_2255052_+	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|106aa|down_5|NZ_CP015099.1_2255095_2255413_-	PRK05423, PRK05423, DUF496 family protein	NA|214aa|down_6|NZ_CP015099.1_2255628_2256270_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|136aa|down_7|NZ_CP015099.1_2256271_2256679_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|320aa|down_8|NZ_CP015099.1_2256857_2257817_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|712aa|down_9|NZ_CP015099.1_2257919_2260055_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed
GCF_001611775.1_ASM161177v1	NZ_CP015099	Glaesserella parasuis strain SC1401 chromosome, complete genome	3	2248190-2248288	3	CRISPRCasFinder	no		DEDDh,cas3,cas2,PD-DExK,DinG	Orphan	AGAGGTGAAACTGGCCCTGCGGGTCC	26	1	2	2248216-2248261|2248216-2248261	NZ_CP015099.1_1151531-1151486|NZ_CP015099.1_1151270-1151225	NA	1	1	Orphan	DEDDh,cas3,cas2,PD-DExK,DinG	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+,NA	NA|134aa|up_9|NZ_CP015099.1_2236564_2236966_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|359aa|up_8|NZ_CP015099.1_2236958_2238035_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|275aa|up_7|NZ_CP015099.1_2238049_2238874_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|640aa|up_6|NZ_CP015099.1_2238881_2240801_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|110aa|up_5|NZ_CP015099.1_2240926_2241256_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+	NA	NA|157aa|up_3|NZ_CP015099.1_2242304_2242775_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|289aa|up_2|NZ_CP015099.1_2242776_2243643_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|294aa|up_1|NZ_CP015099.1_2243726_2244608_+	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|396aa|up_0|NZ_CP015099.1_2244671_2245859_-	COG2081, COG2081, Predicted flavoproteins [General function prediction only]	NA|399aa|down_0|NZ_CP015099.1_2250709_2251906_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|90aa|down_1|NZ_CP015099.1_2252150_2252420_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|121aa|down_2|NZ_CP015099.1_2252413_2252776_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|297aa|down_3|NZ_CP015099.1_2252863_2253754_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|433aa|down_4|NZ_CP015099.1_2253753_2255052_+	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|106aa|down_5|NZ_CP015099.1_2255095_2255413_-	PRK05423, PRK05423, DUF496 family protein	NA|214aa|down_6|NZ_CP015099.1_2255628_2256270_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|136aa|down_7|NZ_CP015099.1_2256271_2256679_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|320aa|down_8|NZ_CP015099.1_2256857_2257817_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|712aa|down_9|NZ_CP015099.1_2257919_2260055_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed
GCF_001611775.1_ASM161177v1	NZ_CP015099	Glaesserella parasuis strain SC1401 chromosome, complete genome	4	2248406-2248783	4	CRISPRCasFinder	no		DEDDh,cas3,cas2,PD-DExK,DinG	Orphan	AGAGGTGAAACTGGCCCTGCGGGTCC	26	5	16	2248432-2248459|2248432-2248459|2248549-2248567|2248549-2248567|2248549-2248567|2248549-2248567|2248549-2248567|2248549-2248567|2248549-2248567|2248549-2248567|2248594-2248648|2248675-2248711|2248675-2248711|2248738-2248756|2248738-2248756|2248738-2248756	NZ_CP015099.1_443046-443073|NZ_CP015099.1_2249116-2249143|NZ_CP015099.1_1087495-1087513|NZ_CP015099.1_1151126-1151108|NZ_CP015099.1_2217659-2217677|NZ_CP015099.1_441381-441399|NZ_CP015099.1_441939-441957|NZ_CP015099.1_1151252-1151234|NZ_CP015099.1_1151513-1151495|NZ_CP015099.1_1151855-1151837|NZ_CP015099.1_1151603-1151549|NZ_CP015099.1_1151522-1151486|NZ_CP015099.1_1151261-1151225|NZ_CP015099.1_441435-441453|NZ_CP015099.1_442398-442416|NZ_CP015099.1_1151756-1151738	NA	6	6	Orphan	DEDDh,cas3,cas2,PD-DExK,DinG	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+,NA	NA|134aa|up_9|NZ_CP015099.1_2236564_2236966_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|359aa|up_8|NZ_CP015099.1_2236958_2238035_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|275aa|up_7|NZ_CP015099.1_2238049_2238874_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|640aa|up_6|NZ_CP015099.1_2238881_2240801_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|110aa|up_5|NZ_CP015099.1_2240926_2241256_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+	NA	NA|157aa|up_3|NZ_CP015099.1_2242304_2242775_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|289aa|up_2|NZ_CP015099.1_2242776_2243643_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|294aa|up_1|NZ_CP015099.1_2243726_2244608_+	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|396aa|up_0|NZ_CP015099.1_2244671_2245859_-	COG2081, COG2081, Predicted flavoproteins [General function prediction only]	NA|399aa|down_0|NZ_CP015099.1_2250709_2251906_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|90aa|down_1|NZ_CP015099.1_2252150_2252420_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|121aa|down_2|NZ_CP015099.1_2252413_2252776_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|297aa|down_3|NZ_CP015099.1_2252863_2253754_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|433aa|down_4|NZ_CP015099.1_2253753_2255052_+	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|106aa|down_5|NZ_CP015099.1_2255095_2255413_-	PRK05423, PRK05423, DUF496 family protein	NA|214aa|down_6|NZ_CP015099.1_2255628_2256270_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|136aa|down_7|NZ_CP015099.1_2256271_2256679_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|320aa|down_8|NZ_CP015099.1_2256857_2257817_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|712aa|down_9|NZ_CP015099.1_2257919_2260055_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed
GCF_001611775.1_ASM161177v1	NZ_CP015099	Glaesserella parasuis strain SC1401 chromosome, complete genome	5	2248856-2249115	5	CRISPRCasFinder	no		DEDDh,cas3,cas2,PD-DExK,DinG	Orphan	AGAGGTGAAACTGGCCCTGCGGGTCC	26	2	4	2248972-2248999|2248972-2248999|2249026-2249089|2249026-2249089	NZ_CP015099.1_443046-443073|NZ_CP015099.1_2249116-2249143|NZ_CP015099.1_1087801-1087864|NZ_CP015099.1_2217965-2218028	NA	3	3	Orphan	DEDDh,cas3,cas2,PD-DExK,DinG	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+,NA	NA|134aa|up_9|NZ_CP015099.1_2236564_2236966_+	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|359aa|up_8|NZ_CP015099.1_2236958_2238035_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|275aa|up_7|NZ_CP015099.1_2238049_2238874_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|640aa|up_6|NZ_CP015099.1_2238881_2240801_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|110aa|up_5|NZ_CP015099.1_2240926_2241256_+	PRK06870, secG, preprotein translocase subunit SecG; Reviewed	NA|92aa|up_4|NZ_CP015099.1_2241701_2241977_+	NA	NA|157aa|up_3|NZ_CP015099.1_2242304_2242775_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|289aa|up_2|NZ_CP015099.1_2242776_2243643_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|294aa|up_1|NZ_CP015099.1_2243726_2244608_+	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional	NA|396aa|up_0|NZ_CP015099.1_2244671_2245859_-	COG2081, COG2081, Predicted flavoproteins [General function prediction only]	NA|399aa|down_0|NZ_CP015099.1_2250709_2251906_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|90aa|down_1|NZ_CP015099.1_2252150_2252420_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|121aa|down_2|NZ_CP015099.1_2252413_2252776_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|297aa|down_3|NZ_CP015099.1_2252863_2253754_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|433aa|down_4|NZ_CP015099.1_2253753_2255052_+	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|106aa|down_5|NZ_CP015099.1_2255095_2255413_-	PRK05423, PRK05423, DUF496 family protein	NA|214aa|down_6|NZ_CP015099.1_2255628_2256270_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|136aa|down_7|NZ_CP015099.1_2256271_2256679_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|320aa|down_8|NZ_CP015099.1_2256857_2257817_+	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|712aa|down_9|NZ_CP015099.1_2257919_2260055_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed
