bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	1.1|138441|33|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	33	0	0	1	33	1026272	1026240	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	1e-09	53.9	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1026240-1026272	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	1.1|138441|33|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	33	0	0	1	33	1304337	1304369	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	1e-09	53.9	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1304337-1304369	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	1.1|138441|33|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.97	33	1	0	1	33	831544	831512	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	1e-08	50.7	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	831512-831544	ATTGAGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	1.1|138441|33|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.94	33	2	0	1	33	999843	999811	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	999811-999843	ATTGGAAATCCAATTCCTCTTTGTTGGGGCCCA	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.30	27	1	0	1	27	796657	796683	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-06	41.2	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	796657-796683	TCCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.30	27	1	0	1	27	880667	880641	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-06	41.2	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	880641-880667	CGGGGCCCCAACACAGAGGCTGGCGGA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.30	27	1	0	1	27	1100645	1100619	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-06	41.2	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	1100619-1100645	CGGGGCCCCAACATAGAAGCTGGCGGA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.30	27	1	0	1	27	1607752	1607778	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-06	41.2	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	1607752-1607778	TCCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	92.59	27	2	0	1	27	880611	880585	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-05	38.0	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	880585-880611	CGGGGCCCCAACACAGAGGCTGGTGGA	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	3.1|831845|27|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	92.59	27	2	0	1	27	2259761	2259787	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-05	38.0	1.0	TCCGCCAGCTTCTGTGTTGGGGCCCCG	2259761-2259787	TCTGTCAGCTTCTGTGTTGGGGCCCCG	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	9.1|2259707|25|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.00	25	1	0	1	25	880665	880641	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-05	38.0	1.0	CGCCAGCCTCTATGTTGGGGCCCCG	880641-880665	CGGGGCCCCAACACAGAGGCTGGCG	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	9.1|2259707|25|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.00	25	1	0	1	25	1100643	1100619	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	4e-05	38.0	1.0	CGCCAGCCTCTATGTTGGGGCCCCG	1100619-1100643	CGGGGCCCCAACATAGAAGCTGGCG	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	31	0	0	1	31	113313	113343	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-09	50.7	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	113313-113343	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	31	0	0	1	31	789358	789328	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-09	50.7	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	789328-789358	ATTGGGAATCCAATTTCTCTTTGTTGGGGCC	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	31	0	0	1	31	1026270	1026240	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-09	50.7	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	1026240-1026270	ATTGGGAATCCAATTTCTCTTTGTTGGGGCC	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	31	0	0	1	31	1304339	1304369	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-09	50.7	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	1304339-1304369	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	100.00	31	0	0	1	31	1905141	1905111	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	9e-09	50.7	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	1905111-1905141	ATTGGGAATCCAATTTCTCTTTGTTGGGGCC	0
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	831542	831512	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	831512-831542	ATTGAGAATCCAATTTCTCTTTGTTGGGGCC	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	2294049	2294079	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	2294049-2294079	GGCCCCAACATAGAGAAATTGGATTCCCAAT	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	789588	789558	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	789558-789588	ATTGGAAATCCAATTTCTCTGTGTTGGGGCC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	10.1|2448959|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	999841	999811	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	GGCCCCAACAAAGAGAAATTGGATTCCCAAT	999811-999841	ATTGGAAATCCAATTCCTCTTTGTTGGGGCC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	796694	796724	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	796694-796724	CATTATTGTAAGCTGACTTTCCGCCAGCTTC	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	1100664	1100634	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	1100634-1100664	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	796638	796668	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	796638-796668	CATTATTGTAAGCTGACTTTCCGTCAGCTTC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	831882	831912	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	831882-831912	CATTATTGTAAGCTGACTTACCATCAGCTTC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	880630	880600	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	880600-880630	GAGGCTGGTGGAAAGTCAGCTTACAATAGTG	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.1|2713411|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	1184371	1184341	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	CATTATTGTAAGCTGACTTTCCACCAGCTTC	1184341-1184371	GAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	113355	113325	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	113325-113355	GAGAAATTGGATTCCCAATTTCTACAGACAA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	1026228	1026258	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	1026228-1026258	TTGTCTGTAGAAATTGGGAATCCAATTTCTC	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	1304381	1304351	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	1304351-1304381	GAGAAATTGGATTCCCAATTTCTACAGACAA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	96.77	31	1	0	1	31	2294091	2294061	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	8e-08	47.5	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	2294061-2294091	GAGAAATTGGATTCCCAATTTCTACAGACAA	1
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	789546	789576	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	789546-789576	TTGTCTGTAGAAATTGGAAATCCAATTTCTC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	831500	831530	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	831500-831530	TTGTCTGTAGAAATTGAGAATCCAATTTCTC	2
NZ_CP012976	Staphylococcus aureus strain ST20130942 chromosome, complete genome	11.2|2713467|31|NZ_CP012976|CRISPRCasFinder	NZ_CP012976.1	Staphylococcus aureus strain ST20130942 chromosome, complete genome	93.55	31	2	0	1	31	1905099	1905129	138415-138499|627728-627820|831816-831900|1100553-1100634|1607608-1607689|1693692-1693777|2136986-2137075|2149316-2149401|2259676-2259762|2448931-2449017|2713386-2713522	7e-07	44.4	1.0	TTGTCTGTAGAAATCGGGAATCCAATTTCTC	1905099-1905129	TTGTCTGTTGAAATTGGGAATCCAATTTCTC	2
