The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	984761	1008580	3924652	protease,transposase	uncultured_virus(20.0%)	19	NA	NA
WP_066724799.1|984761_985421_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_066724802.1|985663_988336_-	DUF11 domain-containing protein	NA	NA	NA	NA	NA
WP_066723977.1|988531_989488_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_066722594.1|989555_990770_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	7.6e-53
WP_066724805.1|992082_992517_+|transposase	IS200/IS605 family transposase	transposase	W0UUZ0	Sulfolobus_monocaudavirus	39.5	2.8e-18
WP_066724806.1|992980_994216_-	LL-diaminopimelate aminotransferase	NA	NA	NA	NA	NA
WP_066724814.1|994760_995564_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_066724818.1|995626_996502_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_066724821.1|996637_997393_-	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
WP_082820087.1|997448_998615_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_066724824.1|998918_1000307_-	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_066724828.1|1000349_1001507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066724831.1|1001511_1002015_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_066724834.1|1002155_1003376_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_066724837.1|1003475_1004102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066724840.1|1004115_1005024_-	ornithine carbamoyltransferase	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	28.9	3.4e-21
WP_066724842.1|1005090_1006284_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.4	1.9e-35
WP_066724845.1|1006280_1007171_-	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_066724849.1|1007236_1008580_-|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	28.8	1.5e-38
>prophage 2
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1071218	1131004	3924652	tRNA,transposase	Bacillus_phage(18.18%)	58	NA	NA
WP_066725016.1|1071218_1072184_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_066725019.1|1072416_1073190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725022.1|1073339_1074581_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	35.7	1.0e-12
WP_066725025.1|1074590_1075016_-	EamA family transporter	NA	NA	NA	NA	NA
WP_066725028.1|1075072_1075375_-	(2Fe-2S) ferredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_082820183.1|1075576_1075828_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_082820184.1|1075824_1076079_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_157471772.1|1077572_1077878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725031.1|1078165_1078405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082820464.1|1078657_1079866_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.7	2.0e-37
WP_082820185.1|1079767_1082332_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	40.3	1.9e-138
WP_066724044.1|1082360_1083317_-|transposase	IS1595-like element ISDesu2 family transposase	transposase	NA	NA	NA	NA
WP_066725036.1|1083496_1084516_-	DUF3187 family protein	NA	NA	NA	NA	NA
WP_066725040.1|1084512_1085397_-	type II secretion system protein GspN	NA	NA	NA	NA	NA
WP_066725043.1|1085393_1085921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725045.1|1085917_1087297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082820186.1|1087301_1088225_-	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA	NA
WP_066725053.1|1088221_1088818_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_082820187.1|1088820_1089297_-	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA	NA
WP_082820188.1|1089238_1089892_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_066725061.1|1089800_1090241_-	type II secretion system major pseudopilin GspG	NA	A0A088F7U0	Vibrio_phage	48.1	3.7e-05
WP_066725064.1|1090321_1091539_-	type II secretion system inner membrane protein GspF	NA	NA	NA	NA	NA
WP_082820189.1|1091552_1093247_-	type II secretion system ATPase GspE	NA	NA	NA	NA	NA
WP_066725068.1|1093247_1095353_-	type II secretion system secretin GspD	NA	NA	NA	NA	NA
WP_082820190.1|1095362_1096355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725079.1|1096553_1099226_+	DNA polymerase I	NA	S4U8J4	Listeria_phage	28.8	1.5e-64
WP_066725082.1|1099448_1100102_+	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_066725085.1|1100187_1101054_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_066725088.1|1101107_1101611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725091.1|1101613_1102147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725094.1|1102216_1103434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725096.1|1103747_1103966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066725098.1|1104029_1104485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066725101.1|1104487_1105048_+	cation-binding protein	NA	NA	NA	NA	NA
WP_066725104.1|1105138_1106083_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_066725107.1|1106075_1107047_-	MCE family protein	NA	NA	NA	NA	NA
WP_066725110.1|1107043_1107700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066725112.1|1107724_1108510_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_066725114.1|1108589_1109984_-	MFS transporter	NA	NA	NA	NA	NA
WP_066723639.1|1110343_1111393_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_066725116.1|1111829_1112279_-	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA	NA
WP_066729688.1|1112507_1113959_+	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	25.2	3.7e-22
WP_066725118.1|1113955_1114624_+	response regulator	NA	NA	NA	NA	NA
WP_066725120.1|1114743_1115187_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_066725121.1|1115206_1116322_+	AI-2E family transporter YdiK	NA	NA	NA	NA	NA
WP_066725123.1|1116453_1117809_+	magnesium transporter	NA	NA	NA	NA	NA
WP_066725125.1|1117849_1118101_+	CDGSH iron-sulfur domain-containing protein	NA	NA	NA	NA	NA
WP_066725127.1|1118157_1118913_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_066725129.1|1119057_1119927_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_066725135.1|1119966_1122030_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_066725138.1|1122333_1124994_+	pyruvate, phosphate dikinase	NA	A0A2D2W2B1	Stenotrophomonas_phage	41.7	6.7e-94
WP_066725140.1|1125222_1126182_+	D-2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	30.6	3.0e-20
WP_066725142.1|1126377_1126806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082820191.1|1126901_1127588_+	deoxyribonuclease V	NA	NA	NA	NA	NA
WP_066725148.1|1127598_1128255_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_066724805.1|1128568_1129003_+|transposase	IS200/IS605 family transposase	transposase	W0UUZ0	Sulfolobus_monocaudavirus	39.5	2.8e-18
WP_066722594.1|1129103_1130318_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	7.6e-53
WP_066724805.1|1130569_1131004_+|transposase	IS200/IS605 family transposase	transposase	W0UUZ0	Sulfolobus_monocaudavirus	39.5	2.8e-18
>prophage 3
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1243603	1266431	3924652	transposase	uncultured_virus(33.33%)	14	NA	NA
WP_157471785.1|1243603_1244572_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	44.0	1.9e-62
WP_066725512.1|1244588_1245803_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	48.1	8.4e-52
WP_082820195.1|1245836_1246097_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_066725518.1|1246639_1247677_+	DNA cytosine methyltransferase	NA	A0A0R6PG08	Moraxella_phage	36.0	4.4e-49
WP_082820196.1|1247683_1248130_+	DNA mismatch endonuclease Vsr	NA	V5UTF4	Oenococcus_phage	39.6	2.2e-10
WP_066725522.1|1248116_1251104_+	ATP-binding protein	NA	A0A1B5FPD5	Escherichia_phage	23.7	1.0e-29
WP_157471787.1|1251105_1252833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066725526.1|1252866_1253847_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_066722594.1|1254142_1255357_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	7.6e-53
WP_157471948.1|1255385_1256027_+	NERD domain-containing protein	NA	A0A2R2ZH57	Clostridioides_phage	33.3	9.1e-13
WP_066725531.1|1256295_1257510_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.7	2.0e-37
WP_066725537.1|1257997_1261237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066725540.1|1261322_1261931_+	YdbL family protein	NA	NA	NA	NA	NA
WP_066723643.1|1264904_1266431_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	53.1	1.0e-147
>prophage 4
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1570201	1669243	3924652	integrase,protease,tRNA,transposase	Klosneuvirus(19.05%)	91	1609774:1609789	1669244:1669647
WP_082820087.1|1570201_1571368_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_082820228.1|1571669_1572440_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_066726293.1|1572834_1573041_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_066726297.1|1573109_1574168_+	type IV pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_066726300.1|1574164_1574725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082820229.1|1574743_1575355_+	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_066726306.1|1575355_1575889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726309.1|1575890_1578728_+	type IV pilus secretin family protein	NA	NA	NA	NA	NA
WP_082820230.1|1578808_1579378_+	shikimate kinase	NA	NA	NA	NA	NA
WP_066726314.1|1579384_1580482_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_066726317.1|1580491_1581280_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_066726320.1|1581269_1581629_+	GTPase	NA	NA	NA	NA	NA
WP_066726323.1|1581640_1582078_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_066726326.1|1582101_1583175_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_066726329.1|1583236_1583713_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_066726332.1|1583786_1585124_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_082820231.1|1585182_1586022_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_066726337.1|1586093_1588214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726340.1|1588213_1589035_+	menaquinone biosynthesis protein	NA	NA	NA	NA	NA
WP_066726343.1|1589036_1589510_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_157471820.1|1590128_1590632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066722476.1|1591133_1592153_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_157471821.1|1592241_1592793_-	AmmeMemoRadiSam system protein A	NA	NA	NA	NA	NA
WP_157471822.1|1593030_1593201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066726351.1|1593590_1595402_-	translational GTPase TypA	NA	NA	NA	NA	NA
WP_082820232.1|1595558_1596920_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_066726357.1|1596916_1597447_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_066729726.1|1597529_1598861_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_066726360.1|1598919_1600812_+	response regulator	NA	NA	NA	NA	NA
WP_066726364.1|1600811_1602296_+	DUF4388 domain-containing protein	NA	NA	NA	NA	NA
WP_066726367.1|1602292_1602952_+	histidinol phosphate phosphatase domain-containing protein	NA	NA	NA	NA	NA
WP_082820233.1|1602992_1604054_+	M42 family metallopeptidase	NA	NA	NA	NA	NA
WP_066726376.1|1604146_1605619_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.1	2.0e-92
WP_066726379.1|1605720_1607277_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.7	9.3e-19
WP_082820234.1|1607285_1608053_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_157471823.1|1608425_1611248_+	hypothetical protein	NA	NA	NA	NA	NA
1609774:1609789	attL	ATCTTGATTACGCTTT	NA	NA	NA	NA
WP_066726388.1|1611278_1612235_+	hypothetical protein	NA	NA	NA	NA	NA
1609774:1609789	attL	ATCTTGATTACGCTTT	NA	NA	NA	NA
WP_066726391.1|1612382_1613393_+	SDR family NAD(P)-dependent oxidoreductase	NA	A0A1V0SKV4	Klosneuvirus	28.0	1.5e-22
WP_066726398.1|1613389_1614577_+	LegC family aminotransferase	NA	A0A0F7LAY0	uncultured_marine_virus	30.5	2.8e-23
WP_066726401.1|1614569_1615730_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
WP_066726404.1|1615726_1616806_+	N-acetylneuraminate synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	31.2	2.4e-26
WP_066726407.1|1616802_1617438_+	acetyltransferase	NA	NA	NA	NA	NA
WP_066726410.1|1617434_1618484_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_066726413.1|1618480_1619176_+	acylneuraminate cytidylyltransferase family protein	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	37.4	4.4e-13
WP_066726415.1|1619172_1620162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726418.1|1620173_1621121_+	myo-inositol 2-dehydrogenase	NA	NA	NA	NA	NA
WP_066726420.1|1621153_1621687_+	acyltransferase	NA	A0A1V0SJ47	Klosneuvirus	34.3	5.1e-09
WP_157471825.1|1621723_1622980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082820235.1|1622952_1624245_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_066726423.1|1624273_1625611_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	37.9	1.2e-80
WP_157471951.1|1625999_1627322_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_157471827.1|1627546_1627717_+	DUF4372 domain-containing protein	NA	NA	NA	NA	NA
WP_157471829.1|1627611_1628493_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_066726429.1|1628565_1628871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066726432.1|1628880_1629750_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_066726434.1|1629746_1630088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157471831.1|1630229_1630856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066726437.1|1631267_1632524_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	20.8	1.2e-11
WP_082820237.1|1632618_1632867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157471833.1|1633101_1634079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082820472.1|1634159_1635335_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
1634830:1634845	attR	ATCTTGATTACGCTTT	NA	NA	NA	NA
WP_066729728.1|1635357_1636383_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI8	Catovirus	36.9	3.1e-39
1634830:1634845	attR	ATCTTGATTACGCTTT	NA	NA	NA	NA
WP_066726437.1|1636597_1637854_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	20.8	1.2e-11
WP_066725512.1|1637925_1639140_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	48.1	8.4e-52
WP_066726441.1|1639314_1640427_+	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_082820473.1|1640526_1640622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726446.1|1640714_1641671_+|transposase	IS1595-like element ISDesu2 family transposase	transposase	NA	NA	NA	NA
WP_066726449.1|1641683_1641896_+	GxxExxY protein	NA	A0A0N7HVH7	Ostreococcus_mediterraneus_virus	46.4	7.9e-06
WP_066726452.1|1641956_1643087_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	48.1	4.9e-102
WP_066726455.1|1643091_1644309_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_066726458.1|1644323_1644962_+	sugar transferase	NA	NA	NA	NA	NA
WP_066726460.1|1645046_1645667_+	acetyltransferase	NA	NA	NA	NA	NA
WP_066726463.1|1645822_1647016_+	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	A0A2K9L0G1	Tupanvirus	48.5	1.4e-99
WP_066726465.1|1647059_1648931_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.5	1.4e-24
WP_066726472.1|1649040_1649430_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_066726475.1|1649455_1650445_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_066726477.1|1650555_1650996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726479.1|1651074_1651656_+	septum formation protein Maf	NA	NA	NA	NA	NA
WP_066726481.1|1651750_1655224_+	DNA polymerase III subunit alpha	NA	A0A1B1PA77	Streptomyces_phage	41.3	2.8e-233
WP_066726483.1|1655319_1656273_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_082820238.1|1656440_1657400_+	sugar kinase	NA	NA	NA	NA	NA
WP_066726489.1|1657415_1658291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157471952.1|1658290_1659052_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	54.1	4.5e-19
WP_066729730.1|1659084_1659471_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_066723645.1|1659761_1660517_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	53.5	1.4e-65
WP_066723643.1|1660531_1662058_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	53.1	1.0e-147
WP_066722594.1|1663505_1664720_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	7.6e-53
WP_082820087.1|1664978_1666145_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_066729732.1|1666268_1666673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066723639.1|1667193_1668243_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_066726432.1|1668373_1669243_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
1669244:1669647	attR	TTCGACGACCTCCGTTTGGCTAAAGGGCCGGGTTTTTTAACCCGTTCCCAAAGTAGTTCGTTTTCCATGGTCAATTCGCCGATCCGGCGCATGGCCTGGTTGAGTTCCGCTTGAGTCGGATCGTTCTGACGTTGTTTCAACGACTCATCGATTCCGGTCAGCGCTTTCTCTCGCCACTGCTCCAGGCGGTAGATTTCGATGCTCAACTCGCGGGACAGAGCATCAACCGATTCGCCCCGCAGCAAGCGCAGAACCACTTCACGCTTGCGGGCAGCGCTCCAACGTTGCCCTTCGGCCAAAGGCCCAGTGACTGTTTCGTTCTTGTTGTTTGTTGTCATTATTAATCTCCTTGGACATCGGGATTCTATCCCAAATCAGTGTCCAAGAAAACTGGTGCCGCTATA	NA	NA	NA	NA
>prophage 5
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1869796	1880287	3924652		Bacillus_phage(16.67%)	7	NA	NA
WP_066726873.1|1869796_1871875_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	30.6	2.7e-21
WP_066729747.1|1871943_1872714_+	MBL fold metallo-hydrolase	NA	A0A2I7SDH3	Paenibacillus_phage	37.4	7.8e-35
WP_066726875.1|1872754_1874050_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.8	1.2e-14
WP_066726877.1|1874274_1877256_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	31.1	3.3e-73
WP_066726879.1|1877258_1878083_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_066726881.1|1878232_1879642_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.7	1.0e-53
WP_066726883.1|1879726_1880287_+	orotate phosphoribosyltransferase	NA	Q58MW1	Prochlorococcus_phage	37.2	1.4e-22
>prophage 6
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1949769	1958536	3924652		Staphylococcus_phage(44.44%)	11	NA	NA
WP_066727006.1|1949769_1950510_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	27.2	2.9e-10
WP_066727007.1|1950578_1950812_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	47.9	1.3e-09
WP_066727009.1|1950970_1952203_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_066727011.1|1952210_1952666_+	ribose 5-phosphate isomerase B	NA	A0A222YX14	Synechococcus_phage	34.3	7.8e-19
WP_066727013.1|1952767_1954018_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.6	2.8e-98
WP_066727015.1|1954031_1954493_+	cytidine deaminase	NA	A0A1D8ESY8	Mycobacterium_phage	43.9	1.0e-21
WP_066727017.1|1954489_1954978_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_066727019.1|1955004_1956120_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	34.2	9.5e-42
WP_066727021.1|1956104_1956755_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	34.0	3.7e-30
WP_066727023.1|1956788_1957994_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	50.8	9.4e-104
WP_066727025.1|1958071_1958536_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	57.4	2.9e-37
>prophage 7
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	1975101	1980341	3924652		uncultured_Mediterranean_phage(33.33%)	8	NA	NA
WP_066727050.1|1975101_1975383_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	47.2	1.2e-17
WP_066727052.1|1975409_1975778_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_066727057.1|1975814_1976594_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	45.7	1.7e-53
WP_066727060.1|1976602_1977256_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	42.9	1.9e-26
WP_066727062.1|1977257_1977851_+	DedA family protein	NA	NA	NA	NA	NA
WP_082820272.1|1977941_1978721_+	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	31.1	1.7e-05
WP_066729760.1|1978795_1979833_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2I7SAT0	Vibrio_phage	38.9	1.9e-36
WP_066727066.1|1979825_1980341_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.7	1.3e-30
>prophage 8
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	2090209	2095890	3924652		Bacillus_phage(33.33%)	9	NA	NA
WP_066727238.1|2090209_2090971_-	7-carboxy-7-deazaguanine synthase QueE	NA	S4TZT1	uncultured_phage	27.8	1.9e-09
WP_066727240.1|2090942_2091314_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	29.6	1.5e-07
WP_066727242.1|2091326_2091530_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
WP_066727243.1|2091614_2092115_-	YcxB family protein	NA	NA	NA	NA	NA
WP_066727244.1|2092125_2092452_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_066727245.1|2092662_2094084_+	ribonuclease H	NA	A0A0N7ACJ6	Bacillus_phage	30.8	1.1e-26
WP_066727247.1|2094155_2094671_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	31.4	1.9e-08
WP_066727248.1|2094727_2095591_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	26.7	2.3e-19
WP_066727249.1|2095590_2095890_+	GIY-YIG nuclease family protein	NA	F2NZ06	Diadromus_pulchellus_ascovirus	45.6	1.8e-08
>prophage 9
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	2369446	2377706	3924652		Staphylococcus_phage(16.67%)	9	NA	NA
WP_066727556.1|2369446_2370172_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.9	3.9e-20
WP_066727557.1|2370168_2370663_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_082820306.1|2370659_2371238_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_066727559.1|2371318_2371840_-	HAD-IIIA family hydrolase	NA	A0A140XBD6	Dickeya_phage	47.4	1.8e-27
WP_066727560.1|2371839_2372802_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.4	1.7e-39
WP_066727561.1|2372843_2373665_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	44.9	6.7e-53
WP_066727562.1|2373666_2375271_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	58.8	5.7e-173
WP_066727563.1|2375371_2376133_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_066727564.1|2376251_2377706_-	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	44.0	5.1e-80
>prophage 10
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	2880883	2930642	3924652	integrase,protease,transposase	uncultured_virus(22.22%)	53	2916381:2916398	2935330:2935347
WP_157471894.1|2880883_2881867_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_082820347.1|2881863_2882169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066727965.1|2882463_2883318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157471895.1|2883318_2884143_-	cytochrome C	NA	NA	NA	NA	NA
WP_066727966.1|2884139_2885240_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_066727967.1|2885248_2885683_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_066727968.1|2885800_2886751_+	glutathione synthase	NA	A0A1D8KN85	Synechococcus_phage	27.3	1.2e-08
WP_066727969.1|2886789_2887467_-	DUF1573 domain-containing protein	NA	NA	NA	NA	NA
WP_066727970.1|2887653_2888181_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	32.4	6.7e-14
WP_066727971.1|2888202_2889864_+	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_066727972.1|2889949_2890144_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_066727973.1|2890223_2890394_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_066727974.1|2890699_2891965_+	acetate kinase	NA	NA	NA	NA	NA
WP_066727975.1|2892065_2892989_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_066727976.1|2893098_2894100_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_082820348.1|2894225_2895179_+	TonB family protein	NA	NA	NA	NA	NA
WP_066727978.1|2895372_2896830_-	glycine dehydrogenase subunit 2	NA	E3ST28	Prochlorococcus_phage	40.9	4.4e-79
WP_066727979.1|2896826_2898176_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	37.8	2.2e-53
WP_066727980.1|2898206_2898593_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_066727981.1|2898663_2899758_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_066727982.1|2899840_2900695_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_066727983.1|2900762_2901407_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_066727984.1|2901435_2902293_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.1	9.6e-34
WP_082820349.1|2902394_2903471_-	aminopeptidase	NA	NA	NA	NA	NA
WP_066727985.1|2903531_2904044_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_066727986.1|2904211_2904466_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_066727987.1|2904688_2905390_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_066727988.1|2905416_2906160_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_066727989.1|2906156_2907443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066727990.1|2907367_2908144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066727991.1|2908145_2910107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066727992.1|2910120_2911035_+	hydrogenase	NA	NA	NA	NA	NA
WP_066727993.1|2911045_2911675_+	hydrogenase	NA	NA	NA	NA	NA
WP_066727994.1|2911679_2913107_+	hydrogenase	NA	NA	NA	NA	NA
WP_066727995.1|2913103_2914624_+	hydrogenase	NA	NA	NA	NA	NA
WP_066727996.1|2914634_2915387_+	hydrogenase	NA	NA	NA	NA	NA
WP_066727997.1|2915524_2917588_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
2916381:2916398	attL	AGGTCCTCGCCCTGGCCG	NA	NA	NA	NA
WP_066727998.1|2917825_2918137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066727999.1|2918252_2918594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066726432.1|2918590_2919460_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_066724805.1|2919570_2920005_-|transposase	IS200/IS605 family transposase	transposase	W0UUZ0	Sulfolobus_monocaudavirus	39.5	2.8e-18
WP_066728000.1|2920261_2920507_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
WP_066728001.1|2920506_2920821_+	CcdB family protein	NA	NA	NA	NA	NA
WP_066728002.1|2920803_2921184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728003.1|2921529_2922132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728004.1|2922483_2923698_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	5.8e-53
WP_066728005.1|2923908_2924148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728006.1|2924183_2925119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157471896.1|2925364_2926000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066726437.1|2925956_2927213_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	20.8	1.2e-11
WP_066728008.1|2927336_2927753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728009.1|2927755_2929162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066726437.1|2929385_2930642_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	20.8	1.2e-11
2935330:2935347	attR	CGGCCAGGGCGAGGACCT	NA	NA	NA	NA
>prophage 11
NZ_CP015080	Desulfuromonas sp. DDH964, complete genome	3924652	3005009	3075454	3924652	integrase,tRNA,transposase,protease	Cronobacter_phage(14.29%)	59	2998047:2998067	3013535:3013555
2998047:2998067	attL	CAGGTCATGCAGCCAGCAGTG	NA	NA	NA	NA
WP_066726432.1|3005009_3005879_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_066726434.1|3005875_3006217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157471902.1|3006388_3007198_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_066728109.1|3007215_3008550_-	flippase	NA	NA	NA	NA	NA
WP_066728110.1|3008546_3009200_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_066729854.1|3009242_3010433_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_066728111.1|3010481_3011996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728112.1|3012001_3013738_-	hypothetical protein	NA	NA	NA	NA	NA
3013535:3013555	attR	CAGGTCATGCAGCCAGCAGTG	NA	NA	NA	NA
WP_066728114.1|3013868_3014840_-	glycosyltransferase family 2 protein	NA	F1C5B0	Cronobacter_phage	31.0	2.1e-29
WP_157471903.1|3015156_3017271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728117.1|3017904_3018600_-	cytochrome c3 family protein	NA	NA	NA	NA	NA
WP_066728118.1|3018804_3019920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728120.1|3019956_3020946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082820357.1|3021255_3022404_-	6-bladed beta-propeller	NA	NA	NA	NA	NA
WP_082820358.1|3022669_3024670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728123.1|3024839_3025697_-	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA	NA
WP_066728124.1|3025900_3027274_-	cytochrome c biogenesis protein ResB	NA	NA	NA	NA	NA
WP_066728130.1|3029413_3030979_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.1	4.1e-67
WP_066728132.1|3031055_3032285_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_066728134.1|3032310_3033447_-	alanine racemase	NA	NA	NA	NA	NA
WP_066728136.1|3033594_3033780_+	CooT family nickel-binding protein	NA	NA	NA	NA	NA
WP_066728138.1|3034012_3035416_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_066728140.1|3035482_3036787_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_066728142.1|3036887_3037454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728144.1|3037602_3039510_-	arginine decarboxylase	NA	NA	NA	NA	NA
WP_066728145.1|3039584_3040733_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_066728147.1|3040760_3041216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728149.1|3041261_3042455_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_066728151.1|3042618_3043164_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_066728153.1|3043393_3044638_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_066728155.1|3044697_3045678_-	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_066728157.1|3045894_3047340_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_066728159.1|3047425_3047620_-	30S ribosomal protein S21	NA	M1HLV7	Pelagibacter_phage	58.5	8.0e-05
WP_082820359.1|3047737_3048877_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_066728162.1|3048948_3049854_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_082820360.1|3049795_3050485_+	cytochrome c3 family protein	NA	NA	NA	NA	NA
WP_082820361.1|3050517_3051228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066722476.1|3051358_3052378_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_066728168.1|3052828_3053539_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_066728170.1|3053596_3055840_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.4	9.5e-158
WP_082820362.1|3055850_3056186_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.6	8.6e-15
WP_066728174.1|3056562_3057231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066728176.1|3057325_3058354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157471904.1|3058501_3058678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066728178.1|3058901_3059231_-	DUF2845 domain-containing protein	NA	NA	NA	NA	NA
WP_066728180.1|3059364_3060795_+	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_066728182.1|3060872_3061457_+	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	36.4	2.9e-10
WP_066728184.1|3061459_3062188_+	TPM domain-containing protein	NA	NA	NA	NA	NA
WP_082820489.1|3062227_3062854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066728186.1|3062957_3064202_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_066728188.1|3064214_3064907_-	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_066728190.1|3064903_3066100_-	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_066728192.1|3066302_3067517_-	Fic family protein	NA	NA	NA	NA	NA
WP_066728193.1|3068351_3069695_+|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_013219066.1|3069978_3070341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_066728196.1|3070353_3072750_-	DNA methyltransferase	NA	NA	NA	NA	NA
WP_066728198.1|3072983_3073313_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_157471905.1|3073396_3073735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066723643.1|3073927_3075454_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	53.1	1.0e-147
