The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	0	9879	2149374		Brevibacillus_phage(50.0%)	9	NA	NA
WP_056986156.1|446_983_-	phenolic acid decarboxylase	NA	NA	NA	NA	NA
WP_056986157.1|1078_1615_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046870727.1|1704_3126_+	amino acid permease	NA	NA	NA	NA	NA
WP_056986158.1|3194_4148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870726.1|4265_4889_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_046870725.1|4907_5543_+	glycoside hydrolase family 73 protein	NA	S5M633	Brevibacillus_phage	51.0	2.7e-33
WP_046870724.1|5567_6146_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_046870723.1|6270_7440_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_062904380.1|7617_9879_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.7	6.9e-132
>prophage 2
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	14847	18770	2149374		Lactococcus_phage(50.0%)	4	NA	NA
WP_062904381.1|14847_15867_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	28.3	2.7e-19
WP_056986161.1|15987_17358_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	53.0	2.4e-135
WP_046870716.1|17534_17825_+	type II toxin-antitoxin system MqsR family toxin	NA	Q9AZG1	Lactococcus_phage	46.1	5.0e-11
WP_046870715.1|17843_18770_+	DUF4065 domain-containing protein	NA	Q9AZG0	Lactococcus_phage	38.1	3.0e-49
>prophage 3
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	23856	25218	2149374		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_062904385.1|23856_25218_+	DEAD/DEAH box helicase	NA	A0A1B1IS59	uncultured_Mediterranean_phage	26.9	5.8e-25
>prophage 4
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	31511	33482	2149374	transposase	Lactococcus_phage(100.0%)	2	NA	NA
WP_062904386.1|31511_32249_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	5.7e-59
WP_003555353.1|32258_33482_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
>prophage 5
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	37148	41238	2149374	transposase	Enterococcus_phage(50.0%)	5	NA	NA
WP_046872481.1|37148_37757_+	metallophosphoesterase family protein	NA	A0A288TXW7	Enterococcus_phage	35.6	1.3e-29
WP_046872482.1|37796_38399_+	YutD family protein	NA	NA	NA	NA	NA
WP_046872483.1|38409_39180_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_046872484.1|39184_39808_+	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_062904581.1|39990_41238_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 6
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	50108	52127	2149374		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_046871790.1|50108_52127_+	copper-translocating P-type ATPase	NA	M1HN09	Paramecium_bursaria_Chlorella_virus	22.9	2.5e-24
>prophage 7
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	68220	70542	2149374		Mycobacterium_phage(100.0%)	1	NA	NA
WP_046871806.1|68220_70542_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.7	7.4e-81
>prophage 8
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	85227	151527	2149374	tRNA,transposase,protease	Mycobacterium_phage(21.43%)	53	NA	NA
WP_046871820.1|85227_88023_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2K9L260	Tupanvirus	28.0	6.4e-87
WP_046871821.1|88195_88420_+	cold-shock protein	NA	NA	NA	NA	NA
WP_046871822.1|88443_88983_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_052694532.1|88992_89280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871824.1|89289_89976_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_046871825.1|90030_91194_+	cysteine desulfurase	NA	NA	NA	NA	NA
WP_046871826.1|91193_91535_+	DUF1831 domain-containing protein	NA	NA	NA	NA	NA
WP_056986047.1|91724_92852_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_046871828.1|93392_94067_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_056986046.1|94075_94765_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_056986045.1|94764_97257_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	27.5	5.8e-63
WP_056986044.1|97330_98311_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.2	4.1e-41
WP_046871832.1|98498_99554_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_063510334.1|99627_100383_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_046871834.1|100379_101291_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_062904389.1|101306_103247_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_062904581.1|103351_104599_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872291.1|106145_107513_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046870943.1|107804_108509_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_056986338.1|108951_110427_+	DUF1175 family protein	NA	D2KRB9	Lactobacillus_phage	42.5	7.2e-13
WP_046872403.1|110528_110741_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_046872404.1|110925_111405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100077779.1|111455_112013_-	peptide deformylase	NA	A0A2I7S809	Vibrio_phage	38.3	1.9e-11
WP_056986339.1|112148_112430_+	UPF0223 family protein	NA	NA	NA	NA	NA
WP_056986342.1|112433_113210_+	inositol monophosphatase family protein	NA	NA	NA	NA	NA
WP_056986340.1|113273_115121_+	translational GTPase TypA	NA	NA	NA	NA	NA
WP_035181568.1|115262_116534_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_062904581.1|116722_117970_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_062904390.1|118561_124612_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_046872191.1|124825_125989_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_062904391.1|126004_129436_+	pyruvate carboxylase	NA	NA	NA	NA	NA
WP_046872193.1|129452_129728_+	YlbG family protein	NA	NA	NA	NA	NA
WP_056986299.1|129737_130301_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_046872194.1|130301_130778_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	40.7	3.6e-30
WP_046872195.1|130790_131837_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_046872196.1|131942_132707_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046872197.1|132758_133241_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	55.8	2.7e-33
WP_062904392.1|133380_135516_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
WP_100077775.1|135493_136531_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_046872198.1|136592_136847_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_046872291.1|137122_138490_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046872199.1|138683_138953_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_056986483.1|139370_141080_+	ribonuclease J	NA	NA	NA	NA	NA
WP_056986485.1|141158_142091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872202.1|142280_143468_+	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	27.9	1.6e-31
WP_046872203.1|143674_145012_+	trigger factor	NA	NA	NA	NA	NA
WP_062904582.1|145124_146372_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872204.1|146600_147848_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.3	1.1e-136
WP_046872205.1|147950_148541_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_046872206.1|148544_148835_+	nucleoside triphosphate pyrophosphohydrolase family protein	NA	A0A1S7FYY8	Listeria_phage	47.3	1.1e-18
WP_167630938.1|148868_149018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904393.1|149315_150794_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA	NA
WP_181407262.1|150795_151527_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.5	3.3e-27
>prophage 9
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	154931	164711	2149374		Salmonella_virus(20.0%)	9	NA	NA
WP_080945570.1|154931_156926_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	28.6	4.5e-26
WP_046871487.1|156989_157772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871486.1|157787_158063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871485.1|158243_159170_+	ribonuclease Z	NA	NA	NA	NA	NA
WP_046871484.1|159185_160001_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.5	7.7e-09
WP_046871483.1|160013_160346_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_162492813.1|160497_162816_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	34.2	2.0e-86
WP_046871482.1|162815_163334_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	40.7	5.8e-26
WP_046871481.1|163382_164711_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	41.3	4.0e-87
>prophage 10
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	176863	177709	2149374		Staphylococcus_phage(100.0%)	1	NA	NA
WP_046871495.1|176863_177709_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	37.8	6.5e-43
>prophage 11
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	181033	186381	2149374	transposase	Bacillus_phage(33.33%)	4	NA	NA
WP_062904583.1|181033_182329_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	39.3	6.2e-69
WP_046871474.1|182537_183266_+	dihydrofolate reductase family protein	NA	NA	NA	NA	NA
WP_046871473.1|183359_184718_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	33.6	5.6e-44
WP_062904584.1|185175_186381_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
>prophage 12
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	190898	196167	2149374		Lactobacillus_phage(33.33%)	4	NA	NA
WP_046871468.1|190898_192386_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	23.7	1.6e-23
WP_046871467.1|192822_193761_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	29.7	4.0e-25
WP_046871466.1|193773_195042_+	dihydroorotase	NA	NA	NA	NA	NA
WP_056986126.1|195045_196167_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.7	2.4e-53
>prophage 13
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	199528	200137	2149374		Pandoravirus(100.0%)	1	NA	NA
WP_046871463.1|199528_200137_+	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	35.8	2.2e-32
>prophage 14
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	204234	205119	2149374		Staphylococcus_phage(100.0%)	1	NA	NA
WP_046871461.1|204234_205119_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.9	2.3e-22
>prophage 15
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	217475	286451	2149374	tRNA,transposase,protease	Streptococcus_phage(23.81%)	61	NA	NA
WP_003555349.1|217475_218213_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_003555353.1|218222_219446_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_046872518.1|219745_220615_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	25.0	1.2e-12
WP_062904401.1|220964_222194_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.4	3.3e-80
WP_046872529.1|222378_222987_-	cadmium resistance transporter	NA	NA	NA	NA	NA
WP_046872528.1|223295_224516_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_056986549.1|224519_225902_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_056986552.1|226082_226460_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_158509291.1|226584_227445_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_056986623.1|227643_229020_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871220.1|229190_229394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871219.1|230664_231411_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	52.1	9.5e-30
WP_046871218.1|231662_232391_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046871217.1|232597_232987_+	CrcB family protein	NA	NA	NA	NA	NA
WP_046871216.1|232983_233337_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_062904403.1|233506_234790_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	50.5	7.4e-107
WP_052694483.1|235133_237485_+	HAD-IC family P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.5	4.8e-43
WP_046871214.1|237548_238979_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_046871213.1|239208_239787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871212.1|239909_240926_+	amidohydrolase	NA	NA	NA	NA	NA
WP_062904404.1|240959_241709_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_046871211.1|241849_242482_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_062904405.1|242665_243838_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
WP_046871209.1|243897_244527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871208.1|244678_244921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871207.1|244936_246061_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	33.0	1.5e-34
WP_046871206.1|246104_246734_-	transcriptional repressor LexA	NA	A0A0N9RTK0	Paenibacillus_phage	33.8	1.2e-06
WP_046871205.1|246871_247126_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_046871204.1|247285_247513_+	YneF family protein	NA	NA	NA	NA	NA
WP_046871203.1|247624_249388_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	26.9	8.0e-43
WP_056986173.1|249377_251174_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.9	1.6e-46
WP_056986172.1|251255_251885_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_046871200.1|251968_252730_+|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_046871199.1|252710_252998_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_046871198.1|253067_254063_+	D-2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	31.9	1.4e-44
WP_046871964.1|254295_255117_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_046871965.1|255214_256093_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_062904406.1|256176_257424_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_046871966.1|257925_258648_+	UMP kinase	NA	NA	NA	NA	NA
WP_046871967.1|258649_259213_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_056986179.1|259403_260174_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	47.6	1.2e-22
WP_046871969.1|260187_260973_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_056986178.1|260990_262259_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_046871971.1|262280_263996_+|tRNA	proline--tRNA ligase	tRNA	A0A1V0SAY0	Catovirus	26.2	1.5e-06
WP_062904407.1|264139_268468_+	PolC-type DNA polymerase III	NA	A0A1X9SH08	Bradyrhizobium_phage	32.7	2.3e-14
WP_046871973.1|268591_269065_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_056986176.1|269080_270181_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_046871975.1|270208_270505_+	YlxR family protein	NA	NA	NA	NA	NA
WP_046871976.1|270497_270812_+	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_062904408.1|270816_273450_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.2	2.0e-21
WP_046871978.1|273460_273814_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_046871979.1|273925_274843_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_046871980.1|274853_275801_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
WP_046871981.1|275898_276948_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_046871982.1|276962_277601_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_056986174.1|277625_279500_+	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	47.6	5.3e-138
WP_046871984.1|279607_280762_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	28.0	1.5e-29
WP_046871985.1|280965_282804_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.5	4.3e-23
WP_052694539.1|282973_283303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872291.1|283507_284875_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_056986620.1|285116_286451_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	36.4	2.0e-62
>prophage 16
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	289542	293850	2149374	tRNA	Klosneuvirus(50.0%)	4	NA	NA
WP_056986271.1|289542_291777_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1V0SJX2	Klosneuvirus	34.6	3.0e-10
WP_056986270.1|291880_292333_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_046870775.1|292360_292987_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_100078141.1|292983_293850_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	36.6	7.9e-20
>prophage 17
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	301254	305003	2149374		Catovirus(33.33%)	5	NA	NA
WP_056986267.1|301254_302175_+	deoxyribonuclease IV	NA	A0A1V0SBL9	Catovirus	29.6	3.9e-25
WP_056986266.1|302253_303066_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_056985993.1|303270_303456_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_046871081.1|303530_303977_+	GatB/YqeY domain-containing protein	NA	G3MAQ0	Bacillus_virus	37.9	5.2e-07
WP_046871082.1|304034_305003_+	PhoH family protein	NA	H6X2N1	Pseudomonas_phage	47.9	7.7e-48
>prophage 18
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	311030	322167	2149374	tRNA	Vibrio_phage(50.0%)	7	NA	NA
WP_046871087.1|311030_312857_+	DNA primase	NA	A0A1S5RFR1	Helicobacter_phage	33.9	4.1e-50
WP_081036062.1|312880_314158_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.6	1.9e-38
WP_046871088.1|314288_314993_+|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	tRNA	NA	NA	NA	NA
WP_100078137.1|314982_315789_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_046871090.1|315821_318437_+	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	33.2	2.0e-122
WP_046871091.1|318489_318672_-	YjzD family protein	NA	NA	NA	NA	NA
WP_056985996.1|318807_322167_+	DNA polymerase III subunit alpha	NA	A0A291AVA6	Streptomyces_phage	32.0	1.3e-147
>prophage 19
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	326543	332474	2149374		uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_046871097.1|326543_327431_+	site-specific tyrosine recombinase XerD	NA	A0A2K9VF00	Mycobacterium_phage	34.0	2.4e-19
WP_046871098.1|327523_327895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871099.1|327884_328649_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.3	1.2e-08
WP_046871137.1|328641_329241_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.7	4.8e-16
WP_046871100.1|329230_329947_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_046871101.1|329952_331011_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046871102.1|331007_332474_+	ATP-dependent DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	33.5	5.8e-55
>prophage 20
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	336811	421585	2149374	tRNA,transposase,protease	Bacillus_virus(12.0%)	73	NA	NA
WP_046871107.1|336811_337087_+	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	65.2	2.9e-24
WP_062904411.1|337197_338466_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_046871109.1|338536_338956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871110.1|338973_339450_+	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA	NA
WP_046871138.1|339529_340405_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.5	1.3e-54
WP_046871111.1|340549_341773_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	43.0	7.7e-37
WP_046871112.1|341779_343681_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.5	1.8e-53
WP_046871113.1|343699_344650_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.4	5.0e-116
WP_046871114.1|344668_345184_+	dihydrofolate reductase	NA	S5M436	Bacillus_phage	42.8	3.5e-23
WP_056985999.1|345253_346099_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	33.6	8.9e-16
WP_046871116.1|346203_347142_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_046871117.1|347147_347753_+	YpmS family protein	NA	NA	NA	NA	NA
WP_046871118.1|347763_347994_+	YozE family protein	NA	NA	NA	NA	NA
WP_056986001.1|348005_349436_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	32.8	7.2e-26
WP_046871120.1|349789_352201_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	30.5	4.6e-118
WP_056986002.1|352942_353584_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046871123.1|353999_354869_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_046871124.1|354846_355617_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	38.8	2.5e-25
WP_056986003.1|355656_356535_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_062904412.1|356639_358007_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871126.1|358168_360289_+	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	36.1	1.0e-97
WP_056986322.1|360377_361286_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	30.7	2.2e-20
WP_046871128.1|361470_362892_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IBU3	Erwinia_phage	27.1	7.6e-28
WP_062904413.1|362913_363792_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_162261350.1|363861_364458_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_046871131.1|364635_366636_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.9	1.8e-123
WP_046871132.1|366660_369129_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.1	8.1e-94
WP_046871133.1|369290_370256_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871134.1|370286_371213_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_046870767.1|371327_372713_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
WP_046872076.1|374970_375324_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_155386988.1|375313_375490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872075.1|375636_376080_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_056986604.1|376270_377410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986605.1|377633_379319_-	ribonuclease J	NA	NA	NA	NA	NA
WP_046872291.1|379540_380908_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871764.1|381112_381976_-	DegV family protein	NA	NA	NA	NA	NA
WP_046871765.1|382170_383865_+	fibronectin/fibrinogen-binding protein	NA	NA	NA	NA	NA
WP_062904414.1|383979_385227_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	7.0e-09
WP_062904415.1|385368_387825_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_062904416.1|387826_388909_-	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA	NA
WP_172793939.1|388927_389449_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_062904417.1|389591_390503_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.4	9.3e-11
WP_046871785.1|390504_390960_-	signal peptidase II	NA	NA	NA	NA	NA
WP_046871770.1|390980_392639_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_046871771.1|392635_393055_-	EbsA family protein	NA	NA	NA	NA	NA
WP_158231967.1|393054_394173_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_046871773.1|394159_395317_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_046871774.1|395784_396126_-	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_046871775.1|396185_396755_-	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_056986132.1|396843_397479_+	Holliday junction resolvase RecU	NA	A0A2H4J3A4	uncultured_Caudovirales_phage	36.5	1.4e-21
WP_056986133.1|397468_399751_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_046871778.1|399823_400549_-	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	36.3	4.9e-15
WP_046871779.1|400570_401872_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.4	2.1e-56
WP_046871786.1|401900_402395_-	DUF5590 domain-containing protein	NA	NA	NA	NA	NA
WP_062904418.1|402459_405333_-	DEAD/DEAH box helicase	NA	A0A1X9I5C8	Streptococcus_phage	34.1	2.2e-58
WP_046871787.1|405661_406636_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_056986134.1|406610_407576_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_056986135.1|407608_408685_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_046871783.1|408697_409738_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_046872537.1|409792_411148_-	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_046872538.1|411250_412063_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_080945593.1|412117_412324_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_046870575.1|412426_413857_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_062904586.1|414141_415158_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.0	3.3e-41
WP_056986521.1|415273_415621_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_046870577.1|415749_416505_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_056986519.1|416501_417023_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_046870579.1|417073_417331_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_046870580.1|417346_417619_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_046870581.1|418229_419234_-	3'-5' exonuclease	NA	A0A0A7RWA3	Clostridium_phage	30.0	8.6e-18
WP_046870582.1|419495_420047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904581.1|420337_421585_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 21
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	438917	440147	2149374	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_062904419.1|438917_440147_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
>prophage 22
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	461184	519364	2149374	tRNA,transposase,protease	Mycobacterium_phage(15.0%)	56	NA	NA
WP_046870596.1|461184_462681_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	24.6	2.2e-17
WP_046870597.1|462687_463680_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_062904422.1|464009_464612_+	serine/threonine protein phosphatase	NA	A8AT52	Listeria_phage	26.2	9.4e-12
WP_003555353.1|464711_465935_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_003555349.1|465944_466682_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_158509292.1|466824_466974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870845.1|467081_468149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870844.1|468407_469841_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_046870843.1|469858_470200_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_080945484.1|470215_471349_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_056986149.1|471366_474915_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_046870841.1|474933_475635_-	ribonuclease III	NA	A0A1V0SDK0	Indivirus	36.5	5.3e-22
WP_062904581.1|475903_477151_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_081115576.1|477136_477466_-	acyl carrier protein	NA	A0A1L2CUN7	Pectobacterium_phage	37.8	7.9e-05
WP_046870839.1|477537_478554_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_046870838.1|480282_482337_-	ATP-dependent DNA helicase RecG	NA	A0A0C5KL28	Enterococcus_phage	28.8	2.6e-05
WP_056986508.1|482397_484032_-	DAK2 domain-containing protein	NA	NA	NA	NA	NA
WP_062904423.1|484110_484473_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_046870836.1|484890_485076_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_062904424.1|485154_486402_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_046872162.1|486586_487231_-	thiamine diphosphokinase	NA	NA	NA	NA	NA
WP_046872161.1|487230_487887_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_056986328.1|487889_488807_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_062904425.1|488822_490313_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	S4VYI4	Pandoravirus	34.2	6.6e-22
WP_046872158.1|490313_491057_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	R4ZGL0	Mythimna_separata_entomopoxvirus	26.8	3.3e-06
WP_046872157.1|491063_492395_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_046872156.1|492391_493342_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.1	3.0e-12
WP_062904307.1|493357_495772_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_046872155.1|495785_497006_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	34.0	2.8e-47
WP_046872154.1|497077_497287_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_046872153.1|497288_497903_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	29.5	2.4e-10
WP_046872152.1|498065_498398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872151.1|498399_499071_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_046872150.1|499073_500009_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_062904426.1|500021_500657_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_081036088.1|500653_501847_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	32.4	8.1e-15
WP_056986362.1|501989_503678_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_046872146.1|503712_504168_-	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986361.1|504184_505012_-	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_046872144.1|505008_505911_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_046872143.1|505903_506170_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_046872142.1|506162_507515_-	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	31.2	2.1e-27
WP_046872141.1|507507_508371_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	36.1	1.3e-33
WP_046872107.1|508467_508872_-	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_046872106.1|508868_509300_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_046872105.1|509319_509877_-	elongation factor P	NA	NA	NA	NA	NA
WP_046872104.1|510027_510315_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_046872103.1|510335_510674_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_046872102.1|510689_510998_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_062904427.1|511145_511361_-	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_046872291.1|511504_512872_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062904428.1|512928_513330_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046872100.1|513455_513917_-	GNAT family N-acetyltransferase	NA	E9LUK4	Lactobacillus_phage	42.0	7.2e-28
WP_046872108.1|515682_516195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904581.1|516726_517974_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871659.1|518824_519364_-	dUTP diphosphatase	NA	A0A1L2JY27	Aeribacillus_phage	31.0	1.3e-09
>prophage 23
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	525483	528496	2149374	transposase	Escherichia_phage(50.0%)	4	NA	NA
WP_046871652.1|525483_526218_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	42.3	4.7e-13
WP_080945533.1|526307_526484_+	DUF3042 family protein	NA	NA	NA	NA	NA
WP_100078185.1|526621_526915_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_062904406.1|527248_528496_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
>prophage 24
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	537006	537669	2149374		Catovirus(100.0%)	1	NA	NA
WP_046871643.1|537006_537669_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	36.1	2.1e-33
>prophage 25
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	541341	542388	2149374	tRNA	Bodo_saltans_virus(100.0%)	1	NA	NA
WP_046871640.1|541341_542388_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.7	9.0e-26
>prophage 26
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	547493	549794	2149374		Bacillus_phage(50.0%)	2	NA	NA
WP_062904431.1|547493_548180_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	29.7	1.4e-27
WP_046871246.1|548375_549794_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.5	2.5e-39
>prophage 27
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	553634	554279	2149374		Bacillus_virus(100.0%)	1	NA	NA
WP_081115577.1|553634_554279_-	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	26.9	7.2e-18
>prophage 28
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	558179	575686	2149374	tRNA,transposase	Mycobacterium_phage(28.57%)	13	NA	NA
WP_062904587.1|558179_558680_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	42.3	4.0e-16
WP_046872291.1|558958_560326_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_056985992.1|560446_562423_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	31.7	5.0e-94
WP_046871231.1|562755_563682_-	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	37.9	4.5e-29
WP_046871230.1|563684_565088_-	DnaD domain protein	NA	NA	NA	NA	NA
WP_081036061.1|565087_565690_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_046871228.1|565710_566301_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_062904433.1|566300_567140_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	34.3	1.0e-32
WP_056985990.1|567163_569827_-	DNA polymerase I	NA	A0A0C5K9B9	Enterococcus_phage	29.4	6.0e-42
WP_062904406.1|569972_571220_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_056985989.1|571437_572142_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_062904434.1|572291_573623_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_056985987.1|573694_575686_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.5	3.7e-89
>prophage 29
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	578736	579477	2149374		Staphylococcus_phage(100.0%)	1	NA	NA
WP_046871732.1|578736_579477_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	7.5e-19
>prophage 30
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	593395	667059	2149374	tRNA,transposase,protease	Staphylococcus_phage(29.41%)	54	NA	NA
WP_046871720.1|593395_595084_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.4	8.9e-76
WP_046871719.1|595521_596229_-	amino acid racemase	NA	NA	NA	NA	NA
WP_046871718.1|596234_597491_-	carboxylate--amine ligase	NA	NA	NA	NA	NA
WP_046871717.1|597490_599035_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_062904435.1|599053_600934_-	asparagine synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
WP_056985982.1|601314_602457_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	28.2	2.6e-34
WP_056985981.1|602542_604369_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	30.9	1.3e-75
WP_035181568.1|604465_605737_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_081115609.1|605961_607209_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	9.1e-09
WP_046871714.1|607356_608016_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	44.5	7.1e-45
WP_052694523.1|608459_609338_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_052694522.1|609371_609647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871713.1|609677_611042_+	amino acid permease	NA	NA	NA	NA	NA
WP_046871712.1|611387_611666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871711.1|611679_611904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871710.1|612010_612829_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_046871709.1|612910_614032_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_056985980.1|614199_614658_-	universal stress protein	NA	NA	NA	NA	NA
WP_046871707.1|614792_615629_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_046871706.1|615696_616422_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_046871705.1|616433_618113_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_046872291.1|618365_619733_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871704.1|619932_620259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904437.1|620439_622854_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	69.2	0.0e+00
WP_046871702.1|623223_623868_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_046871701.1|623864_624431_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	47.9	3.2e-38
WP_062904438.1|624471_625941_-	MFS transporter	NA	NA	NA	NA	NA
WP_046871699.1|626003_627191_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	68.4	4.0e-147
WP_046871698.1|627492_628218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904439.1|635714_636746_-	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_100078153.1|636750_637758_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_046871842.1|637788_638964_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_056986370.1|639184_640906_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	30.2	1.4e-15
WP_046871844.1|640905_641172_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_046871845.1|641332_641530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986369.1|641778_644022_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.9	1.3e-122
WP_046871847.1|644118_646251_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	45.4	2.7e-146
WP_046871848.1|646484_648062_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	26.3	3.7e-31
WP_046871849.1|650131_650971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986621.1|651320_652550_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_046872088.1|652773_653184_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	7.3e-16
WP_062904440.1|653293_654400_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_046872086.1|654703_655261_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_052694544.1|655408_656608_-	serine hydrolase	NA	NA	NA	NA	NA
WP_056986459.1|656631_657453_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_046872084.1|657709_658171_+	flavodoxin	NA	NA	NA	NA	NA
WP_046872083.1|658201_658621_-	GtrA family protein	NA	NA	NA	NA	NA
WP_046872082.1|658627_659752_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	27.2	1.4e-24
WP_056986623.1|660057_661434_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_081115578.1|661660_663040_-	purine permease	NA	NA	NA	NA	NA
WP_046872508.1|663293_663527_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_056986291.1|663632_665504_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.6	3.6e-102
WP_046872509.1|665925_666156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986285.1|666171_667059_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	33.1	1.5e-10
>prophage 31
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	674388	725087	2149374	tRNA,transposase	Escherichia_phage(10.53%)	43	NA	NA
WP_046872380.1|674388_675237_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.6	1.2e-31
WP_056986289.1|675301_676339_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	39.7	9.1e-63
WP_046872291.1|676739_678107_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_080945536.1|678421_679240_-	C40 family peptidase	NA	NA	NA	NA	NA
WP_100078183.1|679745_680342_-	C39 family peptidase	NA	NA	NA	NA	NA
WP_046871679.1|681329_682628_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA	NA
WP_046871678.1|682647_683820_-	PLP-dependent transferase	NA	NA	NA	NA	NA
WP_046871677.1|684422_685427_-	catabolite control protein A	NA	NA	NA	NA	NA
WP_046871676.1|685622_686720_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_062904581.1|686799_688047_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872441.1|688248_688635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872442.1|688655_689057_-	DUF948 domain-containing protein	NA	NA	NA	NA	NA
WP_158231690.1|689332_690088_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_181407286.1|690125_690722_-	XTP/dITP diphosphatase	NA	A0A2P1DNN4	Cassava_brown_streak_virus	33.5	1.7e-13
WP_046872443.1|690724_691543_-	glutamate racemase	NA	NA	NA	NA	NA
WP_062904442.1|691770_692661_+|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	26.7	6.7e-06
WP_003555349.1|692695_693433_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_003555353.1|693442_694666_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_145913122.1|694758_695154_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_056986562.1|695297_696566_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_046872072.1|696565_696802_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
WP_046872071.1|696829_698026_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	29.3	4.8e-23
WP_056986564.1|698025_699549_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.5	5.3e-51
WP_056986566.1|699578_699728_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_046872068.1|699948_700260_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.0	2.1e-15
WP_046872074.1|700345_702703_-	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	56.1	1.8e-26
WP_056986408.1|702857_703151_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_046872066.1|703160_703601_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_056986406.1|703597_703897_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_046872064.1|704016_706656_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.8	1.1e-64
WP_062904444.1|706904_708281_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.3	7.3e-44
WP_046872062.1|708284_709247_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_056986623.1|709589_710966_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_162492814.1|711079_712171_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_062904446.1|712393_713887_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	33.3	2.1e-68
WP_046870914.1|714016_714439_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_046870911.1|714498_715641_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.8	2.3e-83
WP_046870910.1|715716_716736_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	29.7	2.8e-08
WP_046870909.1|716753_717347_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_062904447.1|717414_719370_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.8	4.2e-61
WP_046870907.1|719384_722024_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	25.1	6.1e-39
WP_056986077.1|722181_723741_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_056986078.1|723962_725087_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	64.2	6.1e-121
>prophage 32
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	730072	733022	2149374		Streptococcus_phage(50.0%)	3	NA	NA
WP_062904450.1|730072_731344_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	32.3	2.1e-53
WP_056986081.1|731516_732368_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046870897.1|732386_733022_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.1	4.3e-23
>prophage 33
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	737834	740498	2149374	tRNA	Catovirus(100.0%)	1	NA	NA
WP_056986084.1|737834_740498_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.7	1.7e-161
>prophage 34
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	744011	745259	2149374	transposase	Mycobacterium_phage(100.0%)	1	NA	NA
WP_081115612.1|744011_745259_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.3	1.5e-08
>prophage 35
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	749887	754753	2149374		Bacillus_phage(50.0%)	5	NA	NA
WP_046871380.1|749887_751162_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	48.2	1.1e-97
WP_046871381.1|751489_751771_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056986086.1|751853_752327_+	universal stress protein	NA	NA	NA	NA	NA
WP_056986087.1|752389_752947_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_052694495.1|752986_754753_-	glycerophosphodiester phosphodiesterase	NA	A0A1J0F961	Only_Syngen_Nebraska_virus	24.2	9.2e-07
>prophage 36
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	759820	771209	2149374	transposase	Staphylococcus_phage(40.0%)	12	NA	NA
WP_046871389.1|759820_760687_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.0	1.8e-16
WP_046871390.1|760676_761054_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871391.1|761067_762873_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_046871392.1|762862_763645_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.9	1.2e-30
WP_046871393.1|763798_764713_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_046871394.1|764840_765671_-	methionine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046871395.1|765943_766630_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_046871396.1|766619_767657_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	2.8e-32
WP_062904424.1|767827_769075_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_081115613.1|769478_770606_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_046871398.1|770712_770931_-	DUF2969 domain-containing protein	NA	NA	NA	NA	NA
WP_046871399.1|770948_771209_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	58.0	3.8e-18
>prophage 37
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	780611	785418	2149374		Aeromonas_phage(33.33%)	5	NA	NA
WP_046872234.1|780611_781850_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	51.3	2.8e-95
WP_046872233.1|781862_782885_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	39.2	1.0e-50
WP_046872232.1|782874_783753_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_046872231.1|783745_784828_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_046872230.1|784827_785418_-	thymidine kinase	NA	C1KFH3	Lactobacillus_virus	50.8	1.2e-46
>prophage 38
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	789955	833914	2149374	bacteriocin,transposase,protease	Bacillus_phage(27.27%)	48	NA	NA
WP_046872225.1|789955_791839_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.5	8.8e-64
WP_081115581.1|791831_793016_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	6.1e-31
WP_046872291.1|793149_794517_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_056986560.1|794553_795132_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_062904454.1|795132_795378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904455.1|795381_795795_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046870797.1|795986_796640_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.3	1.9e-26
WP_046870798.1|796641_797352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870799.1|797335_798058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870800.1|798047_798848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904456.1|798921_799248_-	DUF2712 domain-containing protein	NA	NA	NA	NA	NA
WP_062904386.1|799327_800065_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	5.7e-59
WP_003555353.1|800074_801298_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_046870802.1|801926_802262_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_046870803.1|802541_802871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870804.1|802863_803073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870833.1|803358_804192_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_046870805.1|804450_804783_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_056986351.1|804918_805761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870807.1|805960_807316_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_081115584.1|807476_808094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872291.1|808189_809557_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062904457.1|809553_809904_-	EamA family transporter	NA	NA	NA	NA	NA
WP_046870809.1|810258_811125_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_046870810.1|812638_813364_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	2.1e-34
WP_046870811.1|813580_813769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155386934.1|813807_813975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870812.1|814227_815922_-	oleate hydratase	NA	NA	NA	NA	NA
WP_046870813.1|816070_816199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870814.1|816534_816807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870815.1|816854_817217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870816.1|817529_817796_+	membrane protein	NA	NA	NA	NA	NA
WP_162841290.1|818337_818487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100078369.1|818699_818864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870817.1|818931_819744_+	LicD family protein	NA	A0A1V0SD50	Indivirus	36.7	8.5e-08
WP_046870818.1|819797_821474_-	oleate hydratase	NA	NA	NA	NA	NA
WP_046870819.1|821551_821884_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046870820.1|822022_822922_-	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_046870821.1|822965_823583_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_056986075.1|823820_824633_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_062904458.1|824835_825516_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046870824.1|825528_826230_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_056986073.1|826504_827881_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.9	2.0e-12
WP_046870826.1|828267_828573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080945482.1|828987_829167_-	SH3-like domain-containing protein	NA	NA	NA	NA	NA
WP_056986072.1|829135_830272_-	glucosaminidase domain-containing protein	NA	H7BVI1	unidentified_phage	32.3	5.0e-06
WP_046870827.1|830517_832338_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	39.6	9.9e-105
WP_062904459.1|832666_833914_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 39
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	838054	929862	2149374	tRNA,transposase,holin,protease	Streptococcus_phage(21.05%)	82	NA	NA
WP_062904406.1|838054_839302_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_046871552.1|839487_840435_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_062904461.1|840519_841434_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_046871554.1|841538_842075_+	3'-5' exonuclease	NA	A0A0A8WJ41	Clostridium_phage	25.6	3.6e-07
WP_046871555.1|842067_842577_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871556.1|842573_843044_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_046871557.1|843047_843770_-	uracil-DNA glycosylase	NA	E2IUG8	Saimiriine_herpesvirus	43.2	2.3e-41
WP_046871558.1|843904_844777_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_046871559.1|844806_845379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871560.1|845391_845958_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_062904462.1|846088_847516_+	APC family permease	NA	NA	NA	NA	NA
WP_046871562.1|847579_848053_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	59.1	4.3e-44
WP_046871563.1|848066_850439_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.0	1.4e-87
WP_056986069.1|850511_850748_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_046871566.1|852553_854068_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_046871567.1|854429_855749_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	68.0	1.2e-171
WP_046871568.1|855820_856576_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_046871569.1|856658_857861_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_046871570.1|857986_859009_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_056986068.1|859075_860104_-	SorC family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986067.1|860306_861641_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_046871572.1|862220_862817_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	53.8	6.8e-55
WP_046871920.1|862878_863808_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	38.4	2.7e-50
WP_046871919.1|863845_864856_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	55.6	2.0e-94
WP_056986066.1|864852_865746_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.8	5.0e-09
WP_062904463.1|865932_868800_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.0	1.4e-307
WP_062904464.1|868811_870815_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_046871915.1|871012_871642_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_056986248.1|871666_873394_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	55.5	1.1e-185
WP_062904406.1|873686_874934_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_046871913.1|875076_876018_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	48.2	9.7e-80
WP_046871912.1|876181_877090_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	49.7	2.5e-72
WP_056986247.1|877146_878163_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_046871910.1|878232_879075_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_046871909.1|879090_880032_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_046871908.1|880062_880425_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_056986246.1|880529_880871_-	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_046871906.1|881117_881795_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_062904465.1|881813_882569_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	7.4e-22
WP_056986245.1|882636_883440_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.1	5.5e-15
WP_046871903.1|883455_884343_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_046871902.1|884339_885263_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_046871901.1|885268_886135_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	E3SM63	Prochlorococcus_phage	27.4	3.2e-05
WP_062904581.1|886366_887614_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_158509293.1|887772_889128_-	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	29.5	1.4e-23
WP_056986387.1|889171_889891_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.5	1.7e-39
WP_192868910.1|889923_891040_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_046871897.1|891133_893500_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_046871896.1|893758_894325_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_062904466.1|894467_894695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872291.1|894975_896343_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871895.1|896692_898030_-	DNA/RNA helicase	NA	A0A1X9I5S6	Streptococcus_phage	41.3	1.3e-77
WP_046871894.1|898078_898717_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	43.3	1.7e-43
WP_080945555.1|899281_900505_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_057808145.1|900853_902101_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_062904468.1|902223_904059_-	APC family permease	NA	NA	NA	NA	NA
WP_046872398.1|904358_905999_-	chaperonin GroEL	NA	A0A240F766	uncultured_virus	53.6	2.9e-148
WP_046872397.1|906031_906316_-	co-chaperone GroES	NA	A7KV50	Bacillus_phage	33.7	9.2e-10
WP_056986412.1|906501_907158_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_046872395.1|907159_907783_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_046872399.1|907905_909846_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.2	1.2e-52
WP_062904469.1|909941_911327_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	1.1e-28
WP_056986265.1|911819_912815_-	serine hydrolase	NA	NA	NA	NA	NA
WP_046871067.1|912835_913873_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	42.3	7.0e-63
WP_046871066.1|913880_914456_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871065.1|914439_915165_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_046871064.1|915280_916276_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	40.0	2.5e-54
WP_056986264.1|916339_917098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080945500.1|917252_918170_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	58.4	1.2e-85
WP_046871061.1|918156_918501_-	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_046871060.1|918539_919547_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_056986263.1|919570_919900_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_046871059.1|919905_920559_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	49.5	7.2e-50
WP_046871058.1|920623_921223_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_046871057.1|921238_921553_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_046871056.1|921572_923360_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	43.6	7.0e-55
WP_046871055.1|923550_924069_-	nucleoside deaminase	NA	A0A0B5J096	Pandoravirus	39.7	5.1e-06
WP_056986262.1|924058_924682_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_046871054.1|924981_925212_+	redoxin NrdH	NA	X2KRY7	Enterococcus_phage	44.0	1.2e-12
WP_062904470.1|925321_927487_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.8	2.5e-256
WP_046871069.1|927512_928532_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	60.4	1.8e-111
WP_081115615.1|928614_929862_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 40
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	939030	942084	2149374	tRNA	Moumouvirus(50.0%)	2	NA	NA
WP_046872022.1|939030_940437_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	31.1	1.8e-50
WP_046872021.1|940596_942084_-|tRNA	glutamate--tRNA ligase	tRNA	A0A2K9L0I5	Tupanvirus	33.6	7.5e-10
>prophage 41
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	945150	948332	2149374		Bacillus_phage(50.0%)	4	NA	NA
WP_046872018.1|945150_945687_-	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	52.3	3.9e-41
WP_052694540.1|945878_946223_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_046872017.1|946209_946896_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_056986241.1|946949_948332_+	C1 family peptidase	NA	A0A2H4UTL8	Bodo_saltans_virus	28.0	1.6e-43
>prophage 42
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	972278	977524	2149374		Bacillus_virus(66.67%)	3	NA	NA
WP_046871995.1|972278_974939_-	cation-translocating P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	27.7	1.3e-65
WP_046871994.1|975217_976039_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	56.2	5.0e-72
WP_062904473.1|976045_977524_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.8	1.5e-98
>prophage 43
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	982303	986693	2149374	transposase	Streptococcus_phage(66.67%)	3	NA	NA
WP_056986621.1|982303_983533_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_062904474.1|983723_984521_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	35.0	3.7e-32
WP_062904475.1|984815_986693_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	31.9	2.7e-33
>prophage 44
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	992229	993729	2149374		Acinetobacter_phage(100.0%)	1	NA	NA
WP_046872061.1|992229_993729_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	36.2	1.3e-70
>prophage 45
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	999655	1007578	2149374	tRNA,protease	Tupanvirus(33.33%)	6	NA	NA
WP_046871926.1|999655_1001149_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	37.7	4.3e-90
WP_046871927.1|1001222_1002230_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_046871928.1|1002363_1003248_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_062904476.1|1003370_1005542_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	44.5	5.3e-105
WP_046871930.1|1005638_1006181_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_052694536.1|1006180_1007578_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A0N7G7K4	Chrysochromulina_ericina_virus	28.7	1.1e-10
>prophage 46
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1019473	1025109	2149374		Pneumococcus_phage(25.0%)	8	NA	NA
WP_046871614.1|1019473_1019983_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	32.7	2.2e-09
WP_046871613.1|1020076_1020565_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871612.1|1020561_1020927_-	DUF488 family protein	NA	NA	NA	NA	NA
WP_046871611.1|1021011_1021383_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	37.9	1.7e-11
WP_141306217.1|1021401_1021674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904478.1|1021751_1022888_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	32.2	3.9e-35
WP_046871608.1|1022894_1023254_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_062904479.1|1023546_1025109_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	37.5	3.7e-68
>prophage 47
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1035161	1039613	2149374		Only_Syngen_Nebraska_virus(50.0%)	4	NA	NA
WP_046871597.1|1035161_1036763_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.6	3.7e-148
WP_062903871.1|1036938_1037523_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_046871595.1|1037568_1038009_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_046871594.1|1038236_1039613_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.7	1.3e-27
>prophage 48
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1053299	1053917	2149374		Bacillus_phage(100.0%)	1	NA	NA
WP_046871185.1|1053299_1053917_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	25.6	2.5e-07
>prophage 49
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1058543	1124607	2149374	transposase,protease	Streptococcus_phage(18.18%)	55	NA	NA
WP_046870767.1|1058543_1059929_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
WP_062904482.1|1060396_1060627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872291.1|1060775_1062143_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062904483.1|1062179_1063490_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046871146.1|1063666_1064212_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_046871141.1|1064288_1064483_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_046871142.1|1064493_1065063_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_046871143.1|1065076_1065346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052694475.1|1065528_1066443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871144.1|1066480_1067500_-	YdcF family protein	NA	NA	NA	NA	NA
WP_046871145.1|1067727_1068495_+	nicotinamide mononucleotide transporter	NA	A0A291I9N1	Lactobacillus_phage	70.2	8.1e-93
WP_046871585.1|1068948_1069203_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_056986368.1|1069695_1070538_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.5	5.0e-51
WP_046871583.1|1070622_1071486_-	DegV family protein	NA	NA	NA	NA	NA
WP_046871582.1|1071783_1072776_+	ROK family protein	NA	NA	NA	NA	NA
WP_046871581.1|1072930_1073758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871580.1|1073815_1074340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871579.1|1074436_1076098_-	alpha-glucosidase	NA	NA	NA	NA	NA
WP_052694509.1|1076202_1076877_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_046871578.1|1077138_1078146_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_056986321.1|1078258_1078918_-	beta-phosphoglucomutase	NA	NA	NA	NA	NA
WP_046871577.1|1078919_1081181_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_056986320.1|1081292_1082396_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	34.4	7.0e-21
WP_046871587.1|1082465_1084106_-	alpha-glucosidase	NA	NA	NA	NA	NA
WP_081115588.1|1084122_1084998_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_046871575.1|1084997_1085879_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_046871574.1|1085889_1087146_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_062904484.1|1087588_1088818_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.4	3.3e-80
WP_046870640.1|1089055_1090339_-	alpha-amylase	NA	NA	NA	NA	NA
WP_046870639.1|1090364_1092026_-	alpha-glucosidase	NA	NA	NA	NA	NA
WP_062904591.1|1092117_1093077_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_056986221.1|1093302_1094505_+	acetate kinase	NA	NA	NA	NA	NA
WP_056986222.1|1094605_1094794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986223.1|1094812_1096186_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_046870635.1|1096497_1097955_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	26.8	3.9e-35
WP_046870633.1|1099065_1099704_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	51.9	1.8e-21
WP_056986225.1|1100087_1101272_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046870631.1|1101289_1101478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870630.1|1101508_1102750_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_052694444.1|1103117_1103660_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_046870628.1|1103899_1104133_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046870627.1|1104166_1104793_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_056986226.1|1105309_1108522_-	YhgE/Pip family protein	NA	NA	NA	NA	NA
WP_062904581.1|1108840_1110088_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_057808145.1|1110265_1111513_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872281.1|1111737_1112454_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_062904485.1|1112627_1114283_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_062904486.1|1116338_1117742_+	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_062904487.1|1117745_1118195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872284.1|1118578_1119091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872285.1|1119225_1119840_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	28.3	2.1e-06
WP_046872286.1|1119909_1120743_-	YitT family protein	NA	NA	NA	NA	NA
WP_056986616.1|1120889_1121210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986615.1|1121357_1123067_-	SH3-like domain-containing protein	NA	NA	NA	NA	NA
WP_062904592.1|1123401_1124607_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.2e-90
>prophage 50
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1131955	1133203	2149374	transposase	Mycobacterium_phage(100.0%)	1	NA	NA
WP_057808145.1|1131955_1133203_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 51
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1142641	1144612	2149374	transposase	Lactococcus_phage(100.0%)	2	NA	NA
WP_003555349.1|1142641_1143379_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_003555353.1|1143388_1144612_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
>prophage 52
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1148140	1158155	2149374		Staphylococcus_phage(25.0%)	5	NA	NA
WP_046872458.1|1148140_1149229_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.0	2.1e-17
WP_046872457.1|1149250_1150066_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_052694476.1|1150241_1155254_-	bifunctional glycosyltransferase family 2 protein/CDP-glycerol:glycerophosphate glycerophosphotransferase	NA	A0A1V0SAH6	Catovirus	34.0	4.6e-11
WP_056985940.1|1155354_1157382_-	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	35.7	2.7e-103
WP_046871149.1|1157396_1158155_-	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	41.4	4.6e-48
>prophage 53
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1166446	1170595	2149374		Only_Syngen_Nebraska_virus(50.0%)	2	NA	NA
WP_046871179.1|1166446_1169179_+	cation-transporting P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.1	1.3e-76
WP_046871155.1|1169755_1170595_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	28.9	6.9e-29
>prophage 54
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1173907	1174432	2149374		Streptococcus_phage(100.0%)	1	NA	NA
WP_046871159.1|1173907_1174432_-	GNAT family N-acetyltransferase	NA	E4ZFP7	Streptococcus_phage	32.6	1.1e-21
>prophage 55
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1182398	1187923	2149374		Indivirus(33.33%)	5	NA	NA
WP_046871167.1|1182398_1183037_+	AAA family ATPase	NA	A0A1V0SE00	Indivirus	27.7	6.5e-11
WP_046871168.1|1183130_1183337_-	PLDc N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_046871169.1|1185076_1185721_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_046871170.1|1185741_1186224_+	nucleoside 2-deoxyribosyltransferase	NA	K4I206	Lactobacillus_phage	33.8	4.3e-15
WP_046871171.1|1186294_1187923_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.5	1.7e-47
>prophage 56
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1193516	1248414	2149374	transposase,holin	Pseudomonas_phage(25.0%)	48	NA	NA
WP_046870767.1|1193516_1194902_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
WP_046870617.1|1196447_1197575_+	vitamin B12 independent methionine synthase	NA	A0A218MNE0	uncultured_virus	45.4	3.1e-80
WP_062904288.1|1198103_1199309_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
WP_056985949.1|1199931_1200576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870615.1|1200701_1201160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080945465.1|1201369_1201738_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_046870614.1|1201730_1202210_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_046870613.1|1202226_1202796_+	GTP cyclohydrolase I FolE	NA	A0A2I7S8W4	Vibrio_phage	48.6	1.0e-36
WP_056985950.1|1202805_1204122_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_046870611.1|1204114_1204720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904496.1|1204706_1205846_+	dihydropteroate synthase	NA	NA	NA	NA	NA
WP_046870609.1|1206296_1206779_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_046870608.1|1207078_1208425_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_062904581.1|1208688_1209936_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_081115592.1|1210064_1210397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986623.1|1210660_1212037_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062904499.1|1212130_1213549_-	pyruvate oxidase	NA	NA	NA	NA	NA
WP_062904500.1|1214125_1215496_-	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_046870605.1|1215539_1216001_-	universal stress protein	NA	NA	NA	NA	NA
WP_056985953.1|1216222_1217566_-	MFS transporter	NA	NA	NA	NA	NA
WP_062904501.1|1217888_1218449_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_046872092.1|1218471_1219947_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_046872091.1|1220094_1221006_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_063510373.1|1221493_1222309_-	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_062904502.1|1222449_1222923_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	45.1	1.0e-13
WP_046872502.1|1223015_1223477_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_056985955.1|1224665_1225052_-	type II-A CRISPR-associated protein Csn2	NA	NA	NA	NA	NA
WP_062904504.1|1225315_1225573_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_046871854.1|1225550_1226453_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_046872291.1|1226584_1227952_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_062904505.1|1228227_1232364_-	type II CRISPR RNA-guided endonuclease Cas9	NA	NA	NA	NA	NA
WP_046871856.1|1232558_1233071_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_046871857.1|1233286_1233532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871858.1|1233589_1234072_-	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_046871859.1|1234189_1235191_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_056986236.1|1235543_1236047_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_046871860.1|1236103_1236952_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	36.3	1.4e-45
WP_155386982.1|1237074_1237251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052694533.1|1237320_1237782_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871861.1|1237885_1238803_-	ribokinase	NA	NA	NA	NA	NA
WP_046871862.1|1238944_1240441_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_056986237.1|1240699_1242076_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_052694534.1|1242245_1243043_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_046871865.1|1243070_1243337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081036081.1|1243607_1243766_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_046872452.1|1244208_1245594_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_046872450.1|1245688_1247095_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_062904581.1|1247166_1248414_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 57
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1252422	1261288	2149374		Planktothrix_phage(16.67%)	10	NA	NA
WP_046871669.1|1252422_1253073_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	8.6e-19
WP_046871668.1|1253199_1254135_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	48.4	1.2e-74
WP_046871667.1|1254196_1254739_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871666.1|1254820_1256032_-	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	29.8	5.5e-35
WP_080945535.1|1256100_1256985_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046871665.1|1257126_1257594_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
WP_046871664.1|1257635_1259078_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	36.3	3.2e-82
WP_046871663.1|1259258_1259675_-	YolD-like family protein	NA	E3W8I0	Leuconostoc_phage	29.3	8.8e-09
WP_052694514.1|1259679_1259997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986169.1|1259989_1261288_-	excinuclease ABC subunit A	NA	Q6DMX4	Streptococcus_phage	37.3	5.4e-73
>prophage 58
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1273752	1274982	2149374	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_062904506.1|1273752_1274982_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.4	2.6e-80
>prophage 59
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1280695	1285556	2149374		Staphylococcus_phage(50.0%)	6	NA	NA
WP_052694578.1|1280695_1281586_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.9	2.7e-31
WP_046872521.1|1281749_1281983_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_046872520.1|1282043_1282250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155387016.1|1282432_1282591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871035.1|1283020_1283854_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_062904507.1|1283846_1285556_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.0	3.4e-22
>prophage 60
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1296632	1299146	2149374		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_046871023.1|1296632_1299146_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	31.9	3.6e-137
>prophage 61
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1302814	1306567	2149374		Staphylococcus_phage(100.0%)	6	NA	NA
WP_046871019.1|1302814_1303426_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.0	1.6e-22
WP_046871018.1|1303422_1303947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871017.1|1303927_1304734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871016.1|1304825_1305140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871015.1|1305477_1305993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986030.1|1305970_1306567_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.2	2.4e-23
>prophage 62
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1324104	1326046	2149374	transposase	Bacillus_virus(50.0%)	2	NA	NA
WP_046870992.1|1324104_1324773_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	44.9	3.6e-20
WP_145913129.1|1325005_1326046_+|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	26.7	7.8e-06
>prophage 63
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1336692	1348530	2149374	transposase	Wolbachia_phage(40.0%)	11	NA	NA
WP_046870987.1|1336692_1337712_+	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	47.0	1.4e-79
WP_062904512.1|1337796_1338573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904459.1|1338558_1339806_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_056986009.1|1339984_1340800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870985.1|1340960_1341278_+	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	37.6	1.7e-12
WP_056986010.1|1341342_1341930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870983.1|1342066_1342612_+	CvpA family protein	NA	NA	NA	NA	NA
WP_046870981.1|1343062_1343707_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_046870980.1|1343890_1344088_+	CsbD family protein	NA	NA	NA	NA	NA
WP_056986012.1|1344232_1344760_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	33.3	5.3e-19
WP_100212794.1|1344765_1348530_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	22.7	3.0e-15
>prophage 64
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1352962	1361534	2149374		Klosneuvirus(25.0%)	8	NA	NA
WP_052694468.1|1352962_1354255_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	A0A1V0SKB7	Klosneuvirus	27.2	3.0e-23
WP_100078169.1|1354688_1355933_+	purine permease	NA	Q9KX94	Enterobacteria_phage	29.8	1.1e-30
WP_046870973.1|1356020_1356494_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_056986014.1|1356843_1357695_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046870971.1|1357782_1358451_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_046870970.1|1358450_1359518_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.2e-31
WP_046870969.1|1359932_1360508_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_046870968.1|1360532_1361534_+	hypothetical protein	NA	C7T1Z9	Lactococcus_virus	30.0	4.1e-36
>prophage 65
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1366380	1366773	2149374		Streptomyces_phage(100.0%)	1	NA	NA
WP_046870964.1|1366380_1366773_-	HIT family protein	NA	D7NW73	Streptomyces_phage	32.6	2.0e-07
>prophage 66
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1370823	1372140	2149374		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_046870962.1|1370823_1372140_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	32.8	5.0e-66
>prophage 67
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1379722	1380970	2149374	transposase	Mycobacterium_phage(100.0%)	1	NA	NA
WP_062904581.1|1379722_1380970_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 68
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1394246	1402902	2149374		Bacillus_virus(50.0%)	7	NA	NA
WP_062904516.1|1394246_1395386_+	DNA polymerase III subunit beta	NA	D0R7I4	Paenibacillus_phage	35.0	7.7e-15
WP_046870947.1|1395701_1395932_+	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
WP_046870946.1|1395934_1397053_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_056986183.1|1397280_1399260_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	47.1	6.0e-148
WP_100212871.1|1399301_1401836_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	36.6	3.2e-109
WP_046872028.1|1402021_1402312_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_046872029.1|1402350_1402902_+	single-stranded DNA-binding protein	NA	U5U726	Lactobacillus_phage	58.5	8.3e-39
>prophage 69
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1409758	1422725	2149374		Bacillus_phage(42.86%)	11	NA	NA
WP_056986205.1|1409758_1411156_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	53.1	4.6e-126
WP_056986206.1|1411270_1412467_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	33.7	1.8e-54
WP_046872036.1|1412751_1413297_+	C40 family peptidase	NA	A0A217EQL1	Bacillus_phage	30.7	4.8e-07
WP_046872037.1|1413372_1413741_-	DUF1304 family protein	NA	NA	NA	NA	NA
WP_046872038.1|1414235_1414865_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_046872131.1|1415485_1416187_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.5	2.1e-42
WP_056986208.1|1416205_1418053_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.5	6.8e-37
WP_046872133.1|1418049_1419372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904518.1|1419386_1420466_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_046872134.1|1420553_1421357_+	MBL fold metallo-hydrolase	NA	A0A2I7SDH3	Paenibacillus_phage	33.7	8.1e-35
WP_056986211.1|1421468_1422725_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.7	4.8e-18
>prophage 70
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1426488	1428459	2149374	transposase	Lactococcus_phage(100.0%)	2	NA	NA
WP_003555353.1|1426488_1427712_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_003555349.1|1427721_1428459_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
>prophage 71
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1434834	1436064	2149374	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_056986621.1|1434834_1436064_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
>prophage 72
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1442906	1451345	2149374	transposase	Streptococcus_phage(50.0%)	8	NA	NA
WP_046871422.1|1442906_1444880_+	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	NA	E4ZFJ7	Streptococcus_phage	30.3	6.8e-67
WP_056986040.1|1445035_1446601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871420.1|1446787_1447243_+	DNA topology modulation protein FlaR	NA	A0A097BYE2	Leuconostoc_phage	35.0	1.3e-10
WP_046871419.1|1447436_1447760_+	plasmid maintenance system killer protein	NA	NA	NA	NA	NA
WP_046871418.1|1447774_1448107_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_046871417.1|1448280_1449159_+	proline iminopeptidase-family hydrolase	NA	NA	NA	NA	NA
WP_046871416.1|1449174_1449906_+	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	60.9	3.7e-87
WP_062904581.1|1450097_1451345_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 73
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1459201	1470323	2149374		Cedratvirus(20.0%)	14	NA	NA
WP_046871409.1|1459201_1460164_+	2-hydroxyacid dehydrogenase family protein	NA	A0A2R8FCS0	Cedratvirus	32.9	9.1e-33
WP_181407251.1|1460286_1460958_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_046871407.1|1461052_1461379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052694498.1|1461393_1461828_+	GNAT family N-acetyltransferase	NA	A0A1X9I6I8	Streptococcus_phage	34.6	4.0e-20
WP_052694497.1|1461917_1462457_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046871406.1|1462483_1462699_+	DUF3923 family protein	NA	NA	NA	NA	NA
WP_056986037.1|1462794_1463544_-	sulfite exporter TauE/SafE family protein	NA	Q6EVM7	Oenoccocus_phage	50.8	1.1e-54
WP_046872386.1|1463620_1463941_-	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_052694564.1|1463953_1464391_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_062904520.1|1464595_1465375_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_046872388.1|1465426_1467184_+	DUF262 domain-containing protein	NA	U3PFK3	Vibrio_phage	34.9	8.6e-05
WP_046872389.1|1467201_1467786_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_100212786.1|1468188_1468737_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062904521.1|1468742_1470323_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	26.4	7.4e-24
>prophage 74
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1481118	1484028	2149374		Brevibacillus_phage(50.0%)	5	NA	NA
WP_052694492.1|1481118_1481763_-	helix-turn-helix transcriptional regulator	NA	A0A0K2CNE0	Brevibacillus_phage	37.0	6.3e-06
WP_145913134.1|1482175_1482394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871365.1|1482440_1482755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871366.1|1482923_1483208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158509296.1|1483431_1484028_-	helix-turn-helix domain-containing protein	NA	A0A0A7AQV8	Bacillus_phage	44.9	7.7e-06
>prophage 75
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1498205	1499591	2149374		Pseudomonas_phage(100.0%)	1	NA	NA
WP_046870767.1|1498205_1499591_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
>prophage 76
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1503370	1510108	2149374	transposase	Mycobacterium_phage(25.0%)	6	NA	NA
WP_062904581.1|1503370_1504618_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872040.1|1504778_1505183_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_056986292.1|1505885_1507331_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_056986293.1|1507400_1508057_+	ABC transporter ATP-binding protein	NA	A7K9T9	Acanthocystis_turfacea_chlorella_virus	24.6	1.1e-08
WP_046872042.1|1508156_1508843_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.4	1.9e-29
WP_056986294.1|1508842_1510108_+	HAMP domain-containing histidine kinase	NA	B5LWN0	Feldmannia_species_virus	28.9	8.6e-15
>prophage 77
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1516472	1519512	2149374	tRNA,transposase	Cronobacter_phage(50.0%)	2	NA	NA
WP_062904524.1|1516472_1517726_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	41.9	7.8e-85
WP_062904525.1|1518201_1519512_+|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	55.5	8.3e-138
>prophage 78
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1532048	1533020	2149374		Planktothrix_phage(100.0%)	1	NA	NA
WP_046872127.1|1532048_1533020_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.6	1.3e-23
>prophage 79
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1541003	1541489	2149374		Molluscum_contagiosum_virus(100.0%)	1	NA	NA
WP_046872167.1|1541003_1541489_-	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	29.7	1.9e-07
>prophage 80
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1544697	1546530	2149374		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_046872169.1|1544697_1545684_+	choloylglycine hydrolase family protein	NA	M1HS66	Paramecium_bursaria_Chlorella_virus	37.9	3.7e-29
WP_046872170.1|1545828_1546530_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	1.2e-31
>prophage 81
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1559862	1560789	2149374		Staphylococcus_phage(100.0%)	1	NA	NA
WP_046872176.1|1559862_1560789_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	7.7e-21
>prophage 82
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1570541	1579374	2149374	transposase	Bacillus_phage(40.0%)	10	NA	NA
WP_056985972.1|1570541_1571405_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	34.0	3.9e-19
WP_046870922.1|1571419_1571605_+	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_046870923.1|1571826_1572933_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_046870924.1|1572962_1573676_+	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_046870925.1|1573729_1574875_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	33.8	9.1e-64
WP_062904581.1|1575301_1576549_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046870926.1|1576766_1577030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870927.1|1577179_1577371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056985971.1|1577509_1578199_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.2	1.7e-36
WP_056985975.1|1578222_1579374_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.5	5.2e-27
>prophage 83
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1583188	1584661	2149374		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_062904530.1|1583188_1584661_+	HAD-IC family P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	26.9	3.4e-31
>prophage 84
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1602460	1603519	2149374		Planktothrix_phage(100.0%)	1	NA	NA
WP_046871755.1|1602460_1603519_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.5	4.8e-19
>prophage 85
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1609515	1611867	2149374		Planktothrix_phage(100.0%)	1	NA	NA
WP_046871749.1|1609515_1611867_+	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	36.6	2.2e-32
>prophage 86
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1616391	1628296	2149374		Staphylococcus_phage(16.67%)	12	NA	NA
WP_056986251.1|1616391_1617297_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.4	1.4e-35
WP_046871742.1|1617310_1618084_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_046870767.1|1618574_1619960_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
WP_046871867.1|1620055_1620499_-	GtrA family protein	NA	NA	NA	NA	NA
WP_056986193.1|1620520_1622491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986192.1|1622497_1623439_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	37.2	7.5e-48
WP_062904536.1|1623472_1624093_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_046871871.1|1624079_1624739_-	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_046871872.1|1624755_1625427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986191.1|1625643_1627002_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	23.1	1.3e-08
WP_046871874.1|1627045_1627744_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	5.4e-35
WP_046871875.1|1627885_1628296_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	39.4	6.6e-09
>prophage 87
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1641256	1713449	2149374	transposase,integrase	Streptococcus_phage(36.36%)	50	1688307:1688324	1690111:1690128
WP_046872449.1|1641256_1641607_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	36.8	6.7e-10
WP_046872451.1|1641603_1641846_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_062904581.1|1642193_1643441_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_062904537.1|1643734_1648111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904010.1|1648313_1648922_-	C40 family peptidase	NA	A0A221SB46	Streptomyces_phage	39.2	8.3e-16
WP_046871683.1|1649088_1651458_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_046871684.1|1651670_1652963_+	nucleoside permease	NA	NA	NA	NA	NA
WP_046871685.1|1653273_1653693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145913138.1|1653765_1655871_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_056986621.1|1656219_1657449_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_062904538.1|1657791_1659114_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_062916590.1|1659220_1660051_+	class C sortase	NA	NA	NA	NA	NA
WP_100078181.1|1660429_1661083_+	class A sortase	NA	NA	NA	NA	NA
WP_046871689.1|1661192_1662110_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA	NA
WP_046871690.1|1662274_1665568_+	SNF2 helicase associated domain-containing protein	NA	S5NA49	Choristoneura_rosaceana_nucleopolyhedrovirus	27.8	2.5e-42
WP_056986240.1|1666011_1667442_-	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA	NA
WP_046872291.1|1667737_1669105_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_052694520.1|1669346_1670726_+	hypothetical protein	NA	A0A2P0ZKX1	Lactobacillus_phage	41.0	1.3e-35
WP_046871691.1|1670740_1671430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871692.1|1671486_1671921_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A1X9I727	Streptococcus_phage	60.4	1.4e-44
WP_046871693.1|1671942_1672143_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1X9I5W4	Streptococcus_phage	67.8	2.5e-17
WP_100078054.1|1672399_1672522_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986623.1|1672838_1674215_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046872189.1|1674399_1675989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872188.1|1676090_1676960_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986107.1|1677116_1677806_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_046872186.1|1677911_1678445_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_056986106.1|1679046_1679766_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_046872183.1|1680076_1680670_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_046872182.1|1680690_1681530_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_056986105.1|1681693_1682464_-	acetoin reductase	NA	W8CYX9	Bacillus_phage	44.2	5.2e-07
WP_056986102.1|1686225_1687815_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	50.2	1.2e-127
WP_056986101.1|1687811_1688999_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
1688307:1688324	attL	GCTGCCAATCAACGACAG	NA	NA	NA	NA
WP_046872541.1|1689146_1690064_+|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	46.9	4.0e-78
WP_046871637.1|1690320_1691226_+	restriction endonuclease	NA	NA	NA	NA	NA
1690111:1690128	attR	GCTGCCAATCAACGACAG	NA	NA	NA	NA
WP_145913139.1|1691273_1691480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871635.1|1691543_1692332_-	competence protein ComK	NA	NA	NA	NA	NA
WP_046871634.1|1692789_1694100_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_046871633.1|1694268_1695369_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_046871631.1|1696924_1698223_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_046871630.1|1698259_1699705_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_141306320.1|1700023_1701148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871628.1|1701254_1701569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871627.1|1701622_1703929_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_056986100.1|1704191_1706120_+	transcription antiterminator	NA	NA	NA	NA	NA
WP_046871626.1|1706112_1706571_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_046871625.1|1706583_1706898_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA	NA
WP_046871624.1|1706918_1707962_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA	NA
WP_046871623.1|1707965_1710578_+	alpha-mannosidase	NA	NA	NA	NA	NA
WP_046872291.1|1712081_1713449_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
>prophage 88
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1720423	1723545	2149374	transposase	Streptococcus_phage(50.0%)	3	NA	NA
WP_062904288.1|1720423_1721629_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
WP_056986088.1|1722217_1723096_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871936.1|1723140_1723545_-	HicB family protein	NA	A0A1L2JY34	Aeribacillus_phage	29.6	1.7e-09
>prophage 89
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1729806	1731837	2149374	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_046871942.1|1729806_1731837_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.7	2.6e-90
>prophage 90
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1747447	1755662	2149374		Indivirus(33.33%)	8	NA	NA
WP_046872312.1|1747447_1748212_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	26.5	9.2e-12
WP_056986096.1|1748204_1749131_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_046872310.1|1749127_1750120_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_046872309.1|1750717_1752226_+	ABC-F type ribosomal protection protein	NA	M1H3A1	Paramecium_bursaria_Chlorella_virus	28.0	9.6e-13
WP_046872308.1|1752351_1752663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155387000.1|1752715_1752892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872307.1|1752904_1754260_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_056986097.1|1754288_1755662_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	25.8	9.3e-31
>prophage 91
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1774671	1775367	2149374		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_046871548.1|1774671_1775367_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.9	8.1e-15
>prophage 92
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1779836	1782333	2149374		Moumouvirus(50.0%)	2	NA	NA
WP_046871543.1|1779836_1781246_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	M1PC96	Moumouvirus	36.4	2.3e-32
WP_056986595.1|1781343_1782333_+	ribose-phosphate diphosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.7	1.9e-41
>prophage 93
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1786630	1949748	2149374	tRNA,transposase	Mycobacterium_phage(15.22%)	146	NA	NA
WP_081115617.1|1786630_1787878_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871539.1|1787991_1788723_-	C40 family peptidase	NA	A0A1J0GVU1	Streptomyces_phage	52.9	1.9e-19
WP_046871538.1|1788979_1789417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904548.1|1789627_1790278_+	aquaporin	NA	NA	NA	NA	NA
WP_046871536.1|1790590_1790917_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_046871535.1|1790992_1791751_-	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	38.6	5.1e-23
WP_046871534.1|1791981_1792953_+	asparaginase	NA	NA	NA	NA	NA
WP_046871533.1|1793023_1794943_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.0	4.9e-78
WP_158509299.1|1795276_1795501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904412.1|1795720_1797088_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_046871529.1|1797374_1797557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871528.1|1797698_1798565_+	viroplasmin family protein	NA	A0A2H4PRM3	Proteus_phage	35.1	1.1e-16
WP_046871527.1|1798574_1799102_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871526.1|1799629_1800010_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_046871525.1|1800155_1801349_+	MFS transporter	NA	A0A2K5B2B5	Erysipelothrix_phage	22.7	5.1e-17
WP_046871524.1|1801360_1802527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871523.1|1802539_1803040_+	O-acetyl-ADP-ribose deacetylase	NA	F1SVT2	Red_sea_bream_iridovirus	48.3	1.2e-31
WP_046871522.1|1803259_1803448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871521.1|1803827_1804508_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_046871520.1|1804690_1805143_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871519.1|1805142_1806879_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.7	4.0e-47
WP_056986319.1|1806865_1808761_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	28.9	1.3e-14
WP_046871517.1|1809402_1809726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871516.1|1809742_1810561_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_062904581.1|1810807_1812055_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871515.1|1812326_1813409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904550.1|1813862_1814420_+	DUF5067 domain-containing protein	NA	A8ASM1	Listeria_phage	41.5	2.9e-15
WP_046871513.1|1814613_1815006_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0C5AEN7	Bacteriophage	42.5	1.1e-16
WP_046871512.1|1815091_1815310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052694507.1|1815622_1816519_+	serine hydrolase	NA	NA	NA	NA	NA
WP_062904551.1|1816797_1819005_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	58.6	6.3e-255
WP_046871509.1|1818949_1819531_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.0	9.6e-54
WP_056986301.1|1820163_1820769_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA	NA
WP_046871507.1|1820782_1821580_+	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FFL6	Cedratvirus	25.8	6.9e-10
WP_046871506.1|1821582_1822770_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_062904552.1|1822762_1823998_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	41.6	1.7e-92
WP_046871504.1|1823987_1824431_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_046871503.1|1824427_1825819_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_046871502.1|1825815_1826133_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_056986481.1|1826183_1827251_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_080945525.1|1827871_1828336_+	AP2 domain-containing protein	NA	A0A1P8BM92	Lactococcus_phage	35.7	1.7e-16
WP_056986479.1|1828500_1829004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080945527.1|1829145_1830663_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA	NA
WP_081115604.1|1830768_1832472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986530.1|1832908_1834315_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_046872292.1|1834548_1836015_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_046872293.1|1836016_1836535_+	DUF4811 domain-containing protein	NA	NA	NA	NA	NA
WP_046872291.1|1836683_1838051_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_056986260.1|1838260_1839460_+	acetate kinase	NA	NA	NA	NA	NA
WP_056986261.1|1839503_1840481_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_046870692.1|1841162_1842071_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_046870691.1|1842145_1842598_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_056986259.1|1842785_1844198_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_056986258.1|1844250_1845141_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_046870648.1|1845244_1845688_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986257.1|1846082_1847051_-	GMP reductase	NA	G3MBI2	Bacillus_virus	71.6	5.6e-131
WP_046870647.1|1847076_1848366_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	35.1	4.0e-68
WP_062904554.1|1848610_1849906_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.3	3.8e-18
WP_046870645.1|1850632_1851865_-	MFS transporter	NA	NA	NA	NA	NA
WP_052694445.1|1851982_1852342_-	type II toxin-antitoxin system HicB family antitoxin	NA	I3NLB2	Bifidobacterium_phage	32.3	5.4e-07
WP_046870643.1|1852434_1852896_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_046870642.1|1853106_1853877_+	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_046870641.1|1853888_1854680_+	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_046872437.1|1854713_1854971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872436.1|1855445_1855856_+	transcriptional regulator Spx	NA	G3MAU4	Bacillus_virus	31.0	3.6e-07
WP_062904555.1|1855949_1856894_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_046872434.1|1856924_1857716_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_046872433.1|1857801_1858458_-	membrane protein	NA	NA	NA	NA	NA
WP_046872432.1|1858794_1859655_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.1	2.8e-57
WP_056986515.1|1859717_1860197_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_172793946.1|1860383_1861175_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_062904556.1|1861490_1861730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003555349.1|1861764_1862502_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_003555353.1|1862511_1863735_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_062904557.1|1863862_1864873_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.3e-09
WP_046872429.1|1865047_1866433_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_046872428.1|1866680_1869413_+	HAD-IC family P-type ATPase	NA	M1HX51	Paramecium_bursaria_Chlorella_virus	29.1	2.0e-69
WP_056986457.1|1869492_1869876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046872426.1|1870119_1870548_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_035181568.1|1870630_1871902_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_052694569.1|1872079_1872610_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_062904558.1|1872707_1873781_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	35.8	2.8e-43
WP_046872291.1|1874214_1875582_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_100077862.1|1875692_1876670_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_046872422.1|1876840_1877407_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_046872421.1|1877416_1877752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046872420.1|1877903_1878440_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_052694568.1|1878929_1880330_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_081115620.1|1880468_1881716_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046872419.1|1881934_1883494_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_046872418.1|1883494_1885024_+	accessory Sec system glycosyltransferase Asp1	NA	NA	NA	NA	NA
WP_080945589.1|1885153_1885657_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_046872328.1|1887337_1888060_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986599.1|1888299_1890666_+	phosphoketolase family protein	NA	NA	NA	NA	NA
WP_062904424.1|1890814_1892062_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_056986150.1|1892229_1892976_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046870755.1|1893007_1893892_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_046870754.1|1893963_1894422_-	universal stress protein	NA	NA	NA	NA	NA
WP_062904581.1|1894651_1895899_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046870752.1|1896753_1897212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870751.1|1897220_1897865_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_046870750.1|1898109_1898736_-	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_056986153.1|1899290_1900064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870748.1|1900519_1901371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046870747.1|1901411_1901837_-	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	38.9	6.4e-07
WP_046870746.1|1902103_1903039_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_046870745.1|1903104_1905102_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_056986154.1|1905247_1906207_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_046870743.1|1906506_1906980_+	NUDIX domain-containing protein	NA	D0R7J3	Paenibacillus_phage	36.6	1.0e-13
WP_046870742.1|1907037_1907481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046870741.1|1907483_1908467_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K9L162	Tupanvirus	25.2	1.3e-15
WP_046870740.1|1908544_1910704_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	48.1	5.0e-172
WP_046870739.1|1910892_1911321_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_100077854.1|1911365_1912484_+	YibE/F family protein	NA	NA	NA	NA	NA
WP_046870737.1|1912480_1913245_+	YibE/F family protein	NA	NA	NA	NA	NA
WP_046870736.1|1913929_1916605_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_056986155.1|1916748_1917669_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_080945475.1|1917912_1918572_+	TerC family protein	NA	A0A068EP98	Bacillus_phage	47.0	6.0e-36
WP_046870734.1|1918716_1919037_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	42.7	1.2e-21
WP_046870733.1|1919041_1919917_+	DegV family protein	NA	NA	NA	NA	NA
WP_046870732.1|1919988_1920804_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_035181568.1|1920897_1922169_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_046872218.1|1922447_1923278_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.6	2.4e-42
WP_056986501.1|1923274_1924522_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	52.7	6.8e-105
WP_046872559.1|1924581_1924959_-	VOC family protein	NA	NA	NA	NA	NA
WP_046872560.1|1925100_1926648_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	28.4	1.2e-42
WP_046872561.1|1926712_1927621_-	proline-specific peptidase family protein	NA	NA	NA	NA	NA
WP_046872562.1|1927674_1928229_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_062904288.1|1928773_1929979_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
WP_056986466.1|1930988_1931831_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_062904563.1|1931851_1934290_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_056986470.1|1936577_1937411_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_046872505.1|1937415_1937979_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_046870767.1|1938382_1939768_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.7e-29
WP_046871436.1|1939859_1940039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172793931.1|1940293_1940866_+	guanylate kinase	NA	NA	NA	NA	NA
WP_056986609.1|1940941_1941379_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_046871439.1|1941541_1942024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046871440.1|1942043_1942901_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_062904581.1|1943156_1944404_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_181407275.1|1944679_1945414_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	6.7e-36
WP_046871442.1|1945426_1946263_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_046871443.1|1946259_1946898_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_046871444.1|1946911_1947565_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_046871445.1|1947801_1948800_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	1.0e-18
WP_046871446.1|1948800_1949748_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	4.0e-17
>prophage 94
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	1969326	1974937	2149374	transposase	Planktothrix_phage(40.0%)	5	NA	NA
WP_046870870.1|1969326_1970454_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.9	1.0e-19
WP_046870871.1|1970466_1971420_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	5.1e-20
WP_003555349.1|1971726_1972464_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	50.4	7.4e-59
WP_003555353.1|1972473_1973697_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	51.7	1.9e-107
WP_062904567.1|1973776_1974937_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	26.7	8.7e-06
>prophage 95
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2005187	2006228	2149374		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_046872351.1|2005187_2006228_+	zinc-dependent alcohol dehydrogenase family protein	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	29.4	1.9e-07
>prophage 96
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2013213	2014419	2149374	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_062904288.1|2013213_2014419_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	45.3	1.6e-90
>prophage 97
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2018452	2021405	2149374	transposase	Hokovirus(50.0%)	2	NA	NA
WP_056986278.1|2018452_2020006_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	29.6	1.6e-18
WP_062904581.1|2020157_2021405_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
>prophage 98
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2035574	2036753	2149374		Tupanvirus(100.0%)	1	NA	NA
WP_046872256.1|2035574_2036753_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	36.4	8.5e-49
>prophage 99
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2045246	2045669	2149374		Staphylococcus_phage(100.0%)	1	NA	NA
WP_046872263.1|2045246_2045669_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	56.6	1.5e-32
>prophage 100
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2050399	2078829	2149374		Bacillus_phage(14.29%)	29	NA	NA
WP_062904575.1|2050399_2052934_+	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	26.8	2.9e-62
WP_052694553.1|2053119_2053671_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_046872271.1|2053702_2055475_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	41.0	5.1e-106
WP_046872277.1|2055598_2055997_-	antitoxin HicB	NA	A0A0K2CYJ8	Paenibacillus_phage	45.9	1.3e-22
WP_046872542.1|2056265_2056787_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_052694581.1|2056894_2057287_-	toxin-antitoxin system, antitoxin component, HicB family protein	NA	A0A090DBV2	Clostridium_phage	35.6	1.6e-12
WP_046872543.1|2057315_2057708_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0K2CYJ8	Paenibacillus_phage	30.5	1.2e-12
WP_046872544.1|2057754_2057943_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_046872545.1|2058170_2059193_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_046872546.1|2059300_2059720_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056985963.1|2059788_2061582_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	41.0	9.3e-23
WP_046872548.1|2061898_2063224_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.1	1.1e-23
WP_046872549.1|2063435_2063993_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	28.4	2.5e-11
WP_046872550.1|2064143_2064599_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_046872551.1|2064925_2065750_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_046872552.1|2065742_2066450_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.6	3.1e-30
WP_056985962.1|2066442_2067666_+	acyltransferase	NA	NA	NA	NA	NA
WP_046872553.1|2067683_2069225_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	24.0	2.1e-15
WP_062904576.1|2069221_2070196_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	G3M9Z0	Bacillus_virus	34.6	6.6e-07
WP_046872554.1|2070279_2071272_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_046872555.1|2071450_2071987_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056985961.1|2072020_2073796_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.8	3.5e-99
WP_080945513.1|2073822_2074722_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_046871255.1|2074824_2075418_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	40.5	4.7e-24
WP_046871256.1|2075491_2075803_+	MazG-like protein	NA	NA	NA	NA	NA
WP_081113850.1|2075957_2076242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080945507.1|2076213_2076381_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_046871258.1|2076481_2076871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871259.1|2077044_2078829_+	DNA helicase RecQ	NA	A0A2K9L021	Tupanvirus	37.5	2.5e-76
>prophage 101
NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2149374	2089363	2145672	2149374	tRNA,transposase,protease	Mycobacterium_phage(31.25%)	62	NA	NA
WP_046871270.1|2089363_2090029_+	HD domain-containing protein	NA	S4W232	Pandoravirus	29.5	3.2e-13
WP_046871271.1|2090041_2090722_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_062904581.1|2090858_2092106_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871272.1|2092238_2092700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904578.1|2092907_2094470_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_046871274.1|2094571_2095468_+	cation transporter	NA	NA	NA	NA	NA
WP_052694486.1|2095481_2095823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046871275.1|2095968_2096631_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_046871276.1|2096839_2097040_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	73.8	2.1e-21
WP_172793930.1|2097194_2097944_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_046871278.1|2097957_2098404_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_080945508.1|2098518_2099955_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_062904459.1|2100142_2101390_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871279.1|2101511_2102675_-	LCP family protein	NA	NA	NA	NA	NA
WP_046871280.1|2102940_2103501_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_046871281.1|2103487_2104030_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_046871282.1|2104383_2105853_+	amino acid permease	NA	NA	NA	NA	NA
WP_056986455.1|2105982_2106615_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	49.5	1.6e-54
WP_046871284.1|2106894_2108172_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.1	7.2e-86
WP_062904581.1|2109464_2110712_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_056986284.1|2111027_2111492_+	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056986283.1|2111512_2113999_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	40.1	1.5e-127
WP_062904579.1|2114254_2117875_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	25.8	8.4e-55
WP_056986281.1|2118076_2121721_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.7	1.4e-65
WP_052694487.1|2121796_2122480_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_046871289.1|2122827_2123241_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_046871290.1|2123254_2123725_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_062904580.1|2123857_2125957_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.9	1.5e-64
WP_062904581.1|2126076_2127324_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	5.3e-09
WP_046871292.1|2127480_2128035_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.7	1.1e-30
WP_046871293.1|2128348_2128657_+	30S ribosomal protein S10	NA	NA	NA	NA	NA
WP_046871294.1|2128704_2129340_+	50S ribosomal protein L3	NA	NA	NA	NA	NA
WP_046871295.1|2129358_2129982_+	50S ribosomal protein L4	NA	NA	NA	NA	NA
WP_046871296.1|2129981_2130269_+	50S ribosomal protein L23	NA	NA	NA	NA	NA
WP_046871297.1|2130295_2131144_+	50S ribosomal protein L2	NA	NA	NA	NA	NA
WP_046871298.1|2131171_2131462_+	30S ribosomal protein S19	NA	NA	NA	NA	NA
WP_046871299.1|2131474_2131822_+	50S ribosomal protein L22	NA	NA	NA	NA	NA
WP_046871300.1|2131834_2132506_+	30S ribosomal protein S3	NA	NA	NA	NA	NA
WP_046871301.1|2132508_2132943_+	50S ribosomal protein L16	NA	NA	NA	NA	NA
WP_046871302.1|2132932_2133127_+	50S ribosomal protein L29	NA	NA	NA	NA	NA
WP_046871303.1|2133154_2133421_+	30S ribosomal protein S17	NA	NA	NA	NA	NA
WP_046871304.1|2133475_2133844_+	50S ribosomal protein L14	NA	NA	NA	NA	NA
WP_046871305.1|2133877_2134189_+	50S ribosomal protein L24	NA	NA	NA	NA	NA
WP_046871306.1|2134214_2134757_+	50S ribosomal protein L5	NA	NA	NA	NA	NA
WP_074693903.1|2134775_2134961_+	type Z 30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_046871307.1|2134994_2135393_+	30S ribosomal protein S8	NA	NA	NA	NA	NA
WP_046871308.1|2135423_2135960_+	50S ribosomal protein L6	NA	NA	NA	NA	NA
WP_080945511.1|2136005_2136362_+	50S ribosomal protein L18	NA	NA	NA	NA	NA
WP_046871310.1|2136383_2136887_+	30S ribosomal protein S5	NA	NA	NA	NA	NA
WP_046871311.1|2136899_2137082_+	50S ribosomal protein L30	NA	NA	NA	NA	NA
WP_056986232.1|2137110_2137545_+	50S ribosomal protein L15	NA	NA	NA	NA	NA
WP_046871313.1|2137544_2138858_+	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_046871314.1|2138878_2139538_+	adenylate kinase	NA	NA	NA	NA	NA
WP_046871315.1|2139700_2139919_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_011668476.1|2139946_2140066_+	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_046871316.1|2140086_2140452_+	30S ribosomal protein S13	NA	NA	NA	NA	NA
WP_046871317.1|2140473_2140863_+	30S ribosomal protein S11	NA	NA	NA	NA	NA
WP_056986231.1|2140945_2141890_+	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
WP_046871319.1|2141911_2142295_+	50S ribosomal protein L17	NA	NA	NA	NA	NA
WP_062904424.1|2142509_2143757_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	24.7	4.1e-09
WP_056986230.1|2143987_2144824_+	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.2	1.0e-19
WP_046871321.1|2144799_2145672_+	energy-coupling factor ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.7	2.4e-08
>prophage 1
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	0	7860	61853	transposase	Streptococcus_phage(50.0%)	6	NA	NA
WP_051998327.1|599_1157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056986380.1|1324_2233_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_100212880.1|2418_3795_-	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_003679973.1|4042_4687_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062904625.1|5029_6265_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	29.0	4.1e-38
WP_042749386.1|6495_7860_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	22.6	1.5e-09
>prophage 2
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	12809	14956	61853	transposase	Bacillus_phage(66.67%)	3	NA	NA
WP_017866964.1|12809_13067_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	47.1	1.0e-15
WP_145913145.1|13051_13936_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	47.9	4.8e-65
WP_062904649.1|13978_14956_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	25.6	9.9e-11
>prophage 3
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	19269	21168	61853	transposase	Lactobacillus_phage(66.67%)	3	NA	NA
WP_062904632.1|19269_20112_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	99.3	8.8e-157
WP_145913146.1|20291_20417_-|transposase	transposase	transposase	Q6J1X3	Lactobacillus_phage	87.8	2.1e-14
WP_062904633.1|20580_21168_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	34.4	7.3e-17
>prophage 4
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	25250	29954	61853	transposase	Vibrio_phage(33.33%)	5	NA	NA
WP_046870601.1|25250_26123_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	35.4	1.1e-16
WP_100212893.1|26128_27088_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_158509305.1|27263_27719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062904635.1|27809_28985_-|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	28.8	2.0e-26
WP_020923829.1|29399_29954_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	45.1	8.9e-33
>prophage 5
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	45023	49237	61853	transposase	Streptococcus_phage(33.33%)	3	NA	NA
WP_056986621.1|45023_46253_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_062904644.1|46847_47879_+|transposase	IS30 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	34.4	1.8e-42
WP_062904650.1|48283_49237_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	29.6	2.1e-05
>prophage 6
NZ_CP012278	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence	61853	54089	60942	61853	transposase	Paramecium_bursaria_Chlorella_virus(25.0%)	8	NA	NA
WP_016265827.1|54089_54752_+	beta-phosphoglucomutase	NA	A7ITQ4	Paramecium_bursaria_Chlorella_virus	25.8	1.7e-09
WP_056986621.1|55527_56757_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.7	6.7e-81
WP_010011603.1|56905_57145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056986383.1|57216_58008_-	AAA family ATPase	NA	E2ELL2	Clostridium_phage	25.4	1.0e-13
WP_158509306.1|58240_58594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056986382.1|58992_59193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155515909.1|59565_59736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010619295.1|59916_60942_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.2	1.6e-40
>prophage 1
NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	38024	0	4092	38024		Clostridioides_phage(50.0%)	3	NA	NA
WP_062904651.1|1311_2118_+	ParA family protein	NA	A0A1V0DZZ0	Clostridioides_phage	27.8	2.1e-19
WP_003590746.1|2121_2364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904652.1|2988_4092_+	replication initiator protein A	NA	M1PFC4	Streptococcus_phage	37.6	5.9e-12
>prophage 2
NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	38024	13800	14955	38024		Staphylococcus_phage(100.0%)	1	NA	NA
WP_062904657.1|13800_14955_+	C40 family peptidase	NA	A0A1X9I9Q1	Staphylococcus_phage	38.8	4.6e-15
>prophage 3
NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	38024	19662	21798	38024		Streptococcus_phage(100.0%)	1	NA	NA
WP_062904662.1|19662_21798_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	46.2	4.3e-107
>prophage 4
NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	38024	28478	33788	38024	transposase	Vibrio_phage(25.0%)	6	NA	NA
WP_062904666.1|28478_29336_-	site-specific DNA-methyltransferase	NA	A0A2I7R8J8	Vibrio_phage	48.6	1.0e-56
WP_062904667.1|29510_30095_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	34.7	5.9e-19
WP_062904668.1|30233_30830_+	TIR domain-containing protein	NA	A0A0S2MYG4	Enterococcus_phage	56.3	6.8e-55
WP_145913148.1|30874_32116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062904670.1|32134_32701_+	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_053359659.1|32771_33788_-|transposase	IS30 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	33.2	4.3e-33
>prophage 5
NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	38024	37327	37915	38024	integrase	Bacillus_phage(100.0%)	1	NA	NA
WP_010620842.1|37327_37915_+|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	33.0	3.7e-21
