assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001611075.1_ASM161107v1	NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	1	1223607-1224568	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	Type II-A,Type II-B,Type II-C	GCTCTTAACTATATTGATTCGACACTCTTCTAAAAC,GCTCTTAACTATATTGATTCGACACTCTTCTAAAAC,GCTCTTAACTATATTGATTCGACACTCTTCTAAAAC	36,36,36	1	1	1224435-1224465	NZ_CP012275.1_1475195-1475225	NA:NA:NA	14,14,13	14	TypeII-A,TypeII-B,TypeII-C	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA,NA|82aa|down_6|NZ_CP012275.1_1233286_1233532_+	NA|473aa|up_9|NZ_CP012275.1_1212130_1213549_-	TIGR02720, Pyruvate_oxidase, pyruvate oxidase	NA|457aa|up_8|NZ_CP012275.1_1214125_1215496_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|154aa|up_7|NZ_CP012275.1_1215539_1216001_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|448aa|up_6|NZ_CP012275.1_1216222_1217566_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|187aa|up_5|NZ_CP012275.1_1217888_1218449_-	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|492aa|up_4|NZ_CP012275.1_1218471_1219947_-	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA|304aa|up_3|NZ_CP012275.1_1220094_1221006_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|272aa|up_2|NZ_CP012275.1_1221493_1222309_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|158aa|up_1|NZ_CP012275.1_1222449_1222923_-	pfam02464, CinA, Competence-damaged protein	NA|154aa|up_0|NZ_CP012275.1_1223015_1223477_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	csn2|129aa|down_0|NZ_CP012275.1_1224665_1225052_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|86aa|down_1|NZ_CP012275.1_1225315_1225573_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|301aa|down_2|NZ_CP012275.1_1225550_1226453_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	NA|456aa|down_3|NZ_CP012275.1_1226584_1227952_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	cas9|1379aa|down_4|NZ_CP012275.1_1228227_1232364_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|171aa|down_5|NZ_CP012275.1_1232558_1233071_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|82aa|down_6|NZ_CP012275.1_1233286_1233532_+	NA	NA|161aa|down_7|NZ_CP012275.1_1233589_1234072_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|334aa|down_8|NZ_CP012275.1_1234189_1235191_+	COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]	NA|168aa|down_9|NZ_CP012275.1_1235543_1236047_+	PRK00226, greA, transcription elongation factor GreA; Reviewed
GCF_001611075.1_ASM161107v1	NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	2	1803456-1803595	2	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	Orphan	CCTCCTCGATTTTTAAATGACTATTTTGCATACGCAAAATC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA|75aa|up_9|NZ_CP012275.1_1795276_1795501_-,NA|61aa|up_7|NZ_CP012275.1_1797374_1797557_+,NA|389aa|up_2|NZ_CP012275.1_1801360_1802527_+,NA|63aa|up_0|NZ_CP012275.1_1803259_1803448_-,NA|108aa|down_4|NZ_CP012275.1_1809402_1809726_+,NA|361aa|down_7|NZ_CP012275.1_1812326_1813409_+	NA|75aa|up_9|NZ_CP012275.1_1795276_1795501_-	NA	NA|456aa|up_8|NZ_CP012275.1_1795720_1797088_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|61aa|up_7|NZ_CP012275.1_1797374_1797557_+	NA	NA|289aa|up_6|NZ_CP012275.1_1797698_1798565_+	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|176aa|up_5|NZ_CP012275.1_1798574_1799102_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|127aa|up_4|NZ_CP012275.1_1799629_1800010_+	pfam01521, Fe-S_biosyn, Iron-sulphur cluster biosynthesis	NA|398aa|up_3|NZ_CP012275.1_1800155_1801349_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|389aa|up_2|NZ_CP012275.1_1801360_1802527_+	NA	NA|167aa|up_1|NZ_CP012275.1_1802539_1803040_+	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|63aa|up_0|NZ_CP012275.1_1803259_1803448_-	NA	NA|227aa|down_0|NZ_CP012275.1_1803827_1804508_+	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family	NA|151aa|down_1|NZ_CP012275.1_1804690_1805143_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|579aa|down_2|NZ_CP012275.1_1805142_1806879_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|632aa|down_3|NZ_CP012275.1_1806865_1808761_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|108aa|down_4|NZ_CP012275.1_1809402_1809726_+	NA	NA|273aa|down_5|NZ_CP012275.1_1809742_1810561_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|416aa|down_6|NZ_CP012275.1_1810807_1812055_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|361aa|down_7|NZ_CP012275.1_1812326_1813409_+	NA	NA|186aa|down_8|NZ_CP012275.1_1813862_1814420_+	pfam16729, DUF5067, Domain of unknown function (DUF5067)	NA|131aa|down_9|NZ_CP012275.1_1814613_1815006_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system
GCF_001611075.1_ASM161107v1	NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	3	1894531-1894689	3	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	Orphan	AATGTGCTTTTTGTTTACTCATGAATTAAACTAATCCGGATAAAGAAGTTGT	52	1	1	1894583-1894637	NZ_CP012275.1_41307-41253	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA,NA|153aa|down_0|NZ_CP012275.1_1896753_1897212_+,NA|258aa|down_3|NZ_CP012275.1_1899290_1900064_-,NA|284aa|down_4|NZ_CP012275.1_1900519_1901371_-	NA|416aa|up_9|NZ_CP012275.1_1880468_1881716_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|520aa|up_8|NZ_CP012275.1_1881934_1883494_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|510aa|up_7|NZ_CP012275.1_1883494_1885024_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|168aa|up_6|NZ_CP012275.1_1885153_1885657_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|241aa|up_5|NZ_CP012275.1_1887337_1888060_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|789aa|up_4|NZ_CP012275.1_1888299_1890666_+	PRK05261, PRK05261, phosphoketolase	NA|416aa|up_3|NZ_CP012275.1_1890814_1892062_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|249aa|up_2|NZ_CP012275.1_1892229_1892976_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|295aa|up_1|NZ_CP012275.1_1893007_1893892_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|153aa|up_0|NZ_CP012275.1_1893963_1894422_-	pfam00582, Usp, Universal stress protein family	NA|153aa|down_0|NZ_CP012275.1_1896753_1897212_+	NA	NA|215aa|down_1|NZ_CP012275.1_1897220_1897865_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|209aa|down_2|NZ_CP012275.1_1898109_1898736_-	PRK10847, PRK10847, DedA family protein	NA|258aa|down_3|NZ_CP012275.1_1899290_1900064_-	NA	NA|284aa|down_4|NZ_CP012275.1_1900519_1901371_-	NA	NA|142aa|down_5|NZ_CP012275.1_1901411_1901837_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|312aa|down_6|NZ_CP012275.1_1902103_1903039_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|666aa|down_7|NZ_CP012275.1_1903104_1905102_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|320aa|down_8|NZ_CP012275.1_1905247_1906207_-	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB)	NA|158aa|down_9|NZ_CP012275.1_1906506_1906980_+	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
GCF_001611075.1_ASM161107v1	NZ_CP012275	Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome	4	2109348-2109502	4	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	Orphan	TGCTTTTTGTTTACTCATGAATTAAACTAATCCGGATAAAGAAGTTGT	48	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA,NA	NA|250aa|up_9|NZ_CP012275.1_2097194_2097944_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|149aa|up_8|NZ_CP012275.1_2097957_2098404_+	pfam12821, ThrE_2, Threonine/Serine exporter, ThrE	NA|479aa|up_7|NZ_CP012275.1_2098518_2099955_+	COG5632, COG5632, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|416aa|up_6|NZ_CP012275.1_2100142_2101390_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|388aa|up_5|NZ_CP012275.1_2101511_2102675_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|187aa|up_4|NZ_CP012275.1_2102940_2103501_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|181aa|up_3|NZ_CP012275.1_2103487_2104030_+	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|490aa|up_2|NZ_CP012275.1_2104383_2105853_+	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|211aa|up_1|NZ_CP012275.1_2105982_2106615_+	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism]	NA|426aa|up_0|NZ_CP012275.1_2106894_2108172_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|155aa|down_0|NZ_CP012275.1_2111027_2111492_+	COG4463, CtsR, Transcriptional repressor of class III stress genes [Transcription]	NA|829aa|down_1|NZ_CP012275.1_2111512_2113999_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|1207aa|down_2|NZ_CP012275.1_2114254_2117875_+	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|1215aa|down_3|NZ_CP012275.1_2118076_2121721_+	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|228aa|down_4|NZ_CP012275.1_2121796_2122480_-	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain	NA|138aa|down_5|NZ_CP012275.1_2122827_2123241_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|down_6|NZ_CP012275.1_2123254_2123725_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|700aa|down_7|NZ_CP012275.1_2123857_2125957_+	PRK12739, PRK12739, elongation factor G; Reviewed	NA|416aa|down_8|NZ_CP012275.1_2126076_2127324_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|185aa|down_9|NZ_CP012275.1_2127480_2128035_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle
GCF_001611075.1_ASM161107v1	NZ_CP012276	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence	1	4934-5023	1	CRISPRCasFinder	no	RT	RT	Unclear	ATGAGTTTTAGAAGGATGTTAAAT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA|81aa|up_1|NZ_CP012276.1_3726_3969_+,NA|150aa|down_8|NZ_CP012276.1_17312_17762_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|257aa|up_4|NZ_CP012276.1_762_1533_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|253aa|up_3|NZ_CP012276.1_1561_2320_+	PRK06079, PRK06079, enoyl-[acyl-carrier-protein] reductase FabI	NA|374aa|up_2|NZ_CP012276.1_2465_3587_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|81aa|up_1|NZ_CP012276.1_3726_3969_+	NA	NA|295aa|up_0|NZ_CP012276.1_3953_4838_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|196aa|down_0|NZ_CP012276.1_5117_5705_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	RT|462aa|down_1|NZ_CP012276.1_6165_7551_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|94aa|down_2|NZ_CP012276.1_7874_8156_+	pfam13936, HTH_38, Helix-turn-helix domain	NA|449aa|down_3|NZ_CP012276.1_9800_11147_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|589aa|down_4|NZ_CP012276.1_11146_12913_+	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	NA|84aa|down_5|NZ_CP012276.1_13439_13691_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|281aa|down_6|NZ_CP012276.1_13744_14587_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|302aa|down_7|NZ_CP012276.1_14953_15859_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|150aa|down_8|NZ_CP012276.1_17312_17762_-	NA	NA|310aa|down_9|NZ_CP012276.1_17788_18718_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCF_001611075.1_ASM161107v1	NZ_CP012276	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence	2	25049-25180	2	CRISPRCasFinder	no	RT	RT	Unclear	AGACACAAGGATACAAGGATACA	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA|150aa|up_4|NZ_CP012276.1_17312_17762_-,NA|135aa|down_2|NZ_CP012276.1_27519_27924_+,NA|93aa|down_9|NZ_CP012276.1_34862_35141_-	NA|449aa|up_9|NZ_CP012276.1_9800_11147_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|589aa|up_8|NZ_CP012276.1_11146_12913_+	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	NA|84aa|up_7|NZ_CP012276.1_13439_13691_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|281aa|up_6|NZ_CP012276.1_13744_14587_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|302aa|up_5|NZ_CP012276.1_14953_15859_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|150aa|up_4|NZ_CP012276.1_17312_17762_-	NA	NA|310aa|up_3|NZ_CP012276.1_17788_18718_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|705aa|up_2|NZ_CP012276.1_18934_21049_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|117aa|up_1|NZ_CP012276.1_23868_24219_-	pfam17363, DUF5388, Family of unknown function (DUF5388)	NA|267aa|up_0|NZ_CP012276.1_24220_25021_-	pfam13614, AAA_31, AAA domain	NA|93aa|down_0|NZ_CP012276.1_25846_26125_+	cd17748, BRCT_DNA_ligase_like, BRCT domain of bacterial NAD-dependent DNA ligase (LigA) and similar proteins	NA|94aa|down_1|NZ_CP012276.1_27248_27530_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|135aa|down_2|NZ_CP012276.1_27519_27924_+	NA	NA|424aa|down_3|NZ_CP012276.1_28026_29298_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|227aa|down_4|NZ_CP012276.1_29490_30171_-	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family	NA|143aa|down_5|NZ_CP012276.1_30175_30604_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|559aa|down_6|NZ_CP012276.1_30916_32593_+	PRK08617, PRK08617, acetolactate synthase AlsS	NA|237aa|down_7|NZ_CP012276.1_32612_33323_+	cd17299, acetolactate_decarboxylase, alpha-acetolactate decarboxylase	NA|424aa|down_8|NZ_CP012276.1_33422_34694_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|93aa|down_9|NZ_CP012276.1_34862_35141_-	NA
GCF_001611075.1_ASM161107v1	NZ_CP012279	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence	1	3413-3569	1	CRISPRCasFinder	no			Orphan	AATCCCTTGCTACGAGCGGAATTTCGAAAATCGAAAG	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA|81aa|up_0|NZ_CP012279.1_2121_2364_+,NA|62aa|down_1|NZ_CP012279.1_4831_5017_+,NA|93aa|down_2|NZ_CP012279.1_5132_5411_-,NA|76aa|down_3|NZ_CP012279.1_5433_5661_-,NA|110aa|down_5|NZ_CP012279.1_8056_8386_+,NA|205aa|down_6|NZ_CP012279.1_8399_9014_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|269aa|up_1|NZ_CP012279.1_1311_2118_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|81aa|up_0|NZ_CP012279.1_2121_2364_+	NA	NA|94aa|down_0|NZ_CP012279.1_4503_4785_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|62aa|down_1|NZ_CP012279.1_4831_5017_+	NA	NA|93aa|down_2|NZ_CP012279.1_5132_5411_-	NA	NA|76aa|down_3|NZ_CP012279.1_5433_5661_-	NA	NA|688aa|down_4|NZ_CP012279.1_5910_7974_+	pfam03389, MobA_MobL, MobA/MobL family	NA|110aa|down_5|NZ_CP012279.1_8056_8386_+	NA	NA|205aa|down_6|NZ_CP012279.1_8399_9014_+	NA	NA|112aa|down_7|NZ_CP012279.1_9015_9351_+	pfam16943, T4SS_CagC, Cag pathogenicity island, type IV secretory system	NA|121aa|down_8|NZ_CP012279.1_9371_9734_+	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|220aa|down_9|NZ_CP012279.1_9702_10362_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family
GCF_001611075.1_ASM161107v1	NZ_CP012282	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence	1	9329-9483	1	CRISPRCasFinder	no		csa3	Orphan	AATCCCTTGATACAAGCAGACTTCCGAAAAACGGA	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,csa3,csn2,cas2,cas1,cas9,WYL	NA|96aa|up_5|NZ_CP012282.1_4193_4481_+,NA|55aa|up_2|NZ_CP012282.1_6619_6784_-,NA|68aa|up_0|NZ_CP012282.1_7790_7994_+,NA|66aa|down_0|NZ_CP012282.1_10162_10360_+,NA|70aa|down_2|NZ_CP012282.1_11519_11729_-,NA|120aa|down_3|NZ_CP012282.1_11995_12355_-,NA|71aa|down_9|NZ_CP012282.1_21728_21941_-	NA|133aa|up_9|NZ_CP012282.1_2093_2492_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|75aa|up_8|NZ_CP012282.1_2491_2716_+	PRK14214, PRK14214, fluoride efflux transporter CrcB	NA|281aa|up_7|NZ_CP012282.1_2876_3719_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|88aa|up_6|NZ_CP012282.1_3759_4023_-	pfam01527, HTH_Tnp_1, Transposase	NA|96aa|up_5|NZ_CP012282.1_4193_4481_+	NA	NA|159aa|up_4|NZ_CP012282.1_4577_5054_+	pfam00582, Usp, Universal stress protein family	NA|308aa|up_3|NZ_CP012282.1_5109_6033_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|55aa|up_2|NZ_CP012282.1_6619_6784_-	NA	NA|262aa|up_1|NZ_CP012282.1_6950_7736_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|68aa|up_0|NZ_CP012282.1_7790_7994_+	NA	NA|66aa|down_0|NZ_CP012282.1_10162_10360_+	NA	NA|245aa|down_1|NZ_CP012282.1_10410_11145_+	pfam02661, Fic, Fic/DOC family	NA|70aa|down_2|NZ_CP012282.1_11519_11729_-	NA	NA|120aa|down_3|NZ_CP012282.1_11995_12355_-	NA	NA|93aa|down_4|NZ_CP012282.1_13030_13309_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|119aa|down_5|NZ_CP012282.1_13308_13665_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|101aa|down_6|NZ_CP012282.1_13774_14077_-	cd17246, RMtype1_S_SonII-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit (S	NA|173aa|down_7|NZ_CP012282.1_19593_20112_-	pfam08279, HTH_11, HTH domain	NA|312aa|down_8|NZ_CP012282.1_20104_21040_-	pfam01051, Rep_3, Initiator Replication protein	NA|71aa|down_9|NZ_CP012282.1_21728_21941_-	NA
