The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	421162	546065	4926567	transposase,tRNA	Leptospira_phage(25.0%)	89	NA	NA
WP_007969100.1|421162_422143_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.3e-98
WP_099770619.1|422394_423497_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.7	2.0e-44
WP_007962324.1|423600_423999_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
WP_007962326.1|424104_425439_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_003490678.1|425431_426109_-	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	27.4	7.4e-05
WP_007962331.1|426134_426611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962332.1|426797_427715_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	32.0	8.1e-31
WP_007962333.1|428182_430315_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_007969091.1|430881_431844_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_003490669.1|432024_432417_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_007962003.1|432507_432900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962004.1|433010_433670_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_007962005.1|434650_434992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082332186.1|435044_436487_-	MobA/MobL family protein	NA	NA	NA	NA	NA
WP_098477673.1|436520_437623_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_088411727.1|438806_440591_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_022558627.1|440779_440980_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_007964565.1|441029_441824_+	thiazole synthase	NA	NA	NA	NA	NA
WP_007964566.1|442046_442805_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_007964567.1|442882_444745_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_007964568.1|444803_445145_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
WP_005914539.1|445407_445683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964570.1|446146_446860_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_007964572.1|446920_447352_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_007964574.1|447475_448894_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_007964576.1|449158_450211_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_007964578.1|450580_453517_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_042675276.1|453652_457120_-	glycoside hydrolase family 2	NA	NA	NA	NA	NA
WP_007964581.1|457337_459350_+	glycoside hydrolase family 97 protein	NA	NA	NA	NA	NA
WP_157834420.1|459625_461089_+	neprosin family prolyl endopeptidase	NA	NA	NA	NA	NA
WP_007964585.1|461139_462645_-	carboxylesterase family protein	NA	A0A0M4JT58	Mollivirus	32.3	1.4e-27
WP_007964587.1|462644_463562_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_007964589.1|463852_464422_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_007964590.1|464489_467171_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	48.0	1.0e-238
WP_007964591.1|467566_468208_+	DUF1629 domain-containing protein	NA	NA	NA	NA	NA
WP_007964593.1|468366_469026_+	DUF1629 domain-containing protein	NA	NA	NA	NA	NA
WP_007964595.1|469058_473108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_098477673.1|473451_474553_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_088411729.1|475794_477017_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_088411733.1|477349_478330_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.3	5.1e-100
WP_099770619.1|478547_479650_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.7	2.0e-44
WP_088411735.1|479823_480786_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007964562.1|480840_481305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964560.1|481471_484591_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.0	3.1e-74
WP_007964558.1|484587_485658_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_173362063.1|485919_487833_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	28.9	1.8e-27
WP_007964555.1|487895_488804_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_007964552.1|488983_490831_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA	NA
WP_081027790.1|490939_492661_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA	NA
WP_007964549.1|492657_493383_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
WP_007964547.1|493517_495119_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_007964544.1|495118_497122_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_042675264.1|497317_497755_-	DUF2946 family protein	NA	NA	NA	NA	NA
WP_033481473.1|498052_499249_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_022558606.1|500099_500381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007964538.1|500389_501373_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_082332268.1|501538_502741_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_007964534.1|502757_503717_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	49.7	5.8e-80
WP_042675261.1|504015_504522_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_007964528.1|505469_506474_-	fructose-bisphosphate aldolase class I	NA	A0A0K0KVJ8	Prochlorococcus_phage	48.5	3.6e-80
WP_003487265.1|507121_508588_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_088411737.1|508846_509491_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_007965564.1|509487_510663_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_007965563.1|510980_512276_-	DUF3999 domain-containing protein	NA	NA	NA	NA	NA
WP_042675555.1|512272_515110_-	DUF2339 domain-containing protein	NA	NA	NA	NA	NA
WP_007965561.1|515305_515776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003490161.1|515984_516986_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_007965560.1|517492_518005_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA	NA
WP_042675553.1|518289_518913_+	OmpW family protein	NA	NA	NA	NA	NA
WP_042675552.1|519917_520691_+	S1/P1 nuclease	NA	NA	NA	NA	NA
WP_007965554.1|520704_521529_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_007965553.1|521604_522381_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_007965551.1|522397_523084_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_007965549.1|523083_523698_+	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	9.6e-20
WP_042675550.1|523796_524381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007965546.1|524377_525676_-	TonB family protein	NA	NA	NA	NA	NA
WP_022558587.1|525665_526031_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
WP_042675558.1|526195_528154_+	acetyl-CoA hydrolase	NA	NA	NA	NA	NA
WP_007965541.1|528289_529465_+	phosphatidylinositol-specific phospholipase C1-like protein	NA	NA	NA	NA	NA
WP_007965540.1|529592_532307_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_173361943.1|532686_533616_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_007965535.1|533618_534338_+	M23 family metallopeptidase	NA	A0A0M5M794	Arthrobacter_phage	33.3	2.7e-05
WP_007965533.1|534811_536992_-	ferric-rhodotorulic acid/ferric-coprogen receptor FhuE	NA	NA	NA	NA	NA
WP_087945312.1|539122_540344_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_157883113.1|540381_540735_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_007962145.1|540777_541398_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_146037014.1|541697_541973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007962146.1|543306_544287_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_007962146.1|545084_546065_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
>prophage 2
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	1038268	1110445	4926567	transposase,plate	Ralstonia_phage(25.0%)	50	NA	NA
WP_007962146.1|1038268_1039249_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_007967045.1|1039591_1040323_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	27.0	1.4e-09
WP_042676025.1|1040529_1041069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007967050.1|1041078_1041510_-	hotdog family protein	NA	NA	NA	NA	NA
WP_007967051.1|1041496_1043863_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_042676002.1|1043852_1044080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042676004.1|1044069_1044297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172955935.1|1044420_1045041_-	fatty acyl CoA synthetase	NA	NA	NA	NA	NA
WP_007967056.1|1044991_1045966_-	acyltransferase	NA	NA	NA	NA	NA
WP_022560285.1|1045962_1046250_-	ACP dehydratase	NA	NA	NA	NA	NA
WP_005914786.1|1046261_1047011_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_161797554.1|1047064_1047748_-	ketosynthase	NA	NA	NA	NA	NA
WP_005914783.1|1047785_1048055_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_007967063.1|1048354_1049704_+	tryptophan 7-halogenase	NA	NA	NA	NA	NA
WP_007967065.1|1049700_1050708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007967068.1|1051301_1052645_-	acyl-CoA synthetase	NA	NA	NA	NA	NA
WP_157883124.1|1053217_1055578_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_042676029.1|1055970_1056687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007967074.1|1056683_1057250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007967076.1|1057685_1058585_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_007967078.1|1059423_1062228_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.1	9.6e-67
WP_003487371.1|1062304_1062595_+	DUF2782 domain-containing protein	NA	NA	NA	NA	NA
WP_007967080.1|1062905_1063949_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_042676012.1|1063998_1071126_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_042676013.1|1071137_1072814_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
WP_007967084.1|1072810_1073272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007967086.1|1073268_1076799_-	protein kinase	NA	Q0N495	Clanis_bilineata_nucleopolyhedrovirus	29.9	8.8e-09
WP_042676014.1|1076803_1077520_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_033485573.1|1077516_1078092_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_042676018.1|1081616_1082897_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_007967095.1|1082878_1084213_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_007967097.1|1084714_1085605_-	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA	NA
WP_082332431.1|1085855_1086737_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007967101.1|1086795_1088121_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_007967103.1|1088404_1088953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007967105.1|1088949_1090917_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	29.1	7.0e-40
WP_007967107.1|1091066_1092398_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_007967108.1|1092627_1092942_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_042676019.1|1092985_1095505_-	tetratricopeptide repeat protein	NA	A0A2P1EMR8	Moumouvirus	29.2	1.4e-11
WP_007967112.1|1095483_1096023_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_022560311.1|1096372_1096900_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_007967115.1|1096896_1097967_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_042676022.1|1098432_1101318_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007967118.1|1101421_1102723_+	histidine-type phosphatase	NA	NA	NA	NA	NA
WP_007967121.1|1102793_1104098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_098477673.1|1105159_1106262_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_017160267.1|1106502_1106688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1106747_1107710_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_087945312.1|1108039_1109262_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007969091.1|1109482_1110445_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	1398569	1558303	4926567	protease,transposase,tRNA,tail	Bacillus_phage(25.0%)	108	NA	NA
WP_007969091.1|1398569_1399532_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_119866670.1|1399891_1401466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1401551_1402514_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_088411779.1|1402539_1403154_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	35.8	1.1e-15
WP_007969091.1|1403260_1404223_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_173647342.1|1404570_1405086_-	response regulator	NA	NA	NA	NA	NA
WP_098477673.1|1404996_1406098_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_088411781.1|1406095_1406683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014091501.1|1406835_1407039_+	YdcH family protein	NA	NA	NA	NA	NA
WP_039731855.1|1407333_1408314_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_022560412.1|1408506_1411173_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_042675470.1|1411172_1412144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007965325.1|1412554_1413601_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_007965324.1|1413769_1416808_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007965322.1|1417137_1420173_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007965320.1|1420278_1421799_+	tryptophan 7-halogenase	NA	M4T1E3	Cyanophage	28.8	2.1e-47
WP_007965313.1|1422200_1422932_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_042675465.1|1422928_1423939_-	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA	NA
WP_007965310.1|1424216_1424885_+	DUF480 domain-containing protein	NA	NA	NA	NA	NA
WP_007965308.1|1425163_1426126_-	DUF4272 domain-containing protein	NA	NA	NA	NA	NA
WP_007965306.1|1426455_1427010_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_007965304.1|1427086_1429063_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.2	8.2e-113
WP_005917020.1|1429268_1429898_+	thymidine kinase	NA	A0A023W530	Serratia_phage	55.0	3.3e-52
WP_007965298.1|1430282_1431527_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_007965295.1|1431685_1433287_-	glucan biosynthesis protein D	NA	NA	NA	NA	NA
WP_082332309.1|1433355_1434471_-	DUF4380 domain-containing protein	NA	NA	NA	NA	NA
WP_007965291.1|1434997_1435813_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	27.0	5.4e-18
WP_007964946.1|1442081_1443263_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_042675383.1|1443344_1445249_-	GAF domain-containing protein	NA	B5LWN8	Feldmannia_species_virus	28.2	4.3e-18
WP_007964950.1|1445245_1445839_-	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
WP_007964952.1|1445938_1447204_-	tetracycline resistance MFS efflux pump	NA	NA	NA	NA	NA
WP_007964954.1|1447655_1449785_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_033481624.1|1449962_1450169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082332284.1|1450361_1450748_-	YchJ family protein	NA	NA	NA	NA	NA
WP_082332285.1|1450784_1451654_+	TSUP family transporter	NA	NA	NA	NA	NA
WP_007964959.1|1451689_1455685_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_022560433.1|1456434_1457136_-	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
WP_007964964.1|1457122_1458592_-	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
WP_007964966.1|1458611_1459214_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	48.4	3.4e-46
WP_007964968.1|1459344_1459797_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_082332286.1|1459885_1460104_+	DUF1656 domain-containing protein	NA	NA	NA	NA	NA
WP_042675393.1|1460100_1461033_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_007964972.1|1461029_1462490_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_042675394.1|1462486_1464823_+	FUSC family protein	NA	NA	NA	NA	NA
WP_007964975.1|1465073_1466435_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	27.1	1.9e-31
WP_007964977.1|1467187_1468090_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007964979.1|1468190_1469024_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007964982.1|1469847_1471113_+	cardiolipin synthase B	NA	NA	NA	NA	NA
WP_007964984.1|1471136_1471664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022560440.1|1471935_1472142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964986.1|1472128_1473235_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_040964294.1|1473440_1473929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675398.1|1474774_1475068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164673450.1|1475084_1475789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1475851_1476814_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|1480841_1481804_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|1481920_1482883_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007963580.1|1485969_1486446_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_007963579.1|1486508_1487078_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042675021.1|1487198_1487771_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007963576.1|1487855_1488599_+	glucose 1-dehydrogenase	NA	A0A0M4JSW6	Mollivirus	28.8	2.3e-15
WP_003482333.1|1490152_1490485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042675016.1|1490675_1492601_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_042675015.1|1492668_1492848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007963549.1|1492950_1494345_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_007963546.1|1494916_1497328_-	AAA family ATPase	NA	A0A0K2FLP8	Brevibacillus_phage	23.4	3.5e-09
WP_088411785.1|1497530_1501583_-	exodeoxyribonuclease V subunit beta	NA	A0A068EQC7	Bacillus_phage	21.1	9.8e-12
WP_088412077.1|1501579_1504984_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
WP_088411787.1|1505333_1510601_-	autotransporter domain-containing protein	NA	F5B3Z3	Synechococcus_phage	45.8	3.7e-19
WP_007968272.1|1510860_1511412_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_007968270.1|1511480_1512008_+|tail	phage tail protein	tail	A0A0U4JYA4	Arthrobacter_phage	28.0	1.0e-09
WP_007968268.1|1512068_1512605_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_007968266.1|1512609_1513167_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011257259.1|1513185_1513473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007968264.1|1513856_1514651_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.2	4.9e-08
WP_003482308.1|1514650_1515400_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_022560464.1|1515411_1515957_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_003482305.1|1515953_1516616_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_042676192.1|1516605_1516896_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_007968258.1|1516906_1517962_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_007968257.1|1518093_1518474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007968256.1|1518477_1519023_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	33.9	2.0e-16
WP_172955881.1|1519176_1519590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173361961.1|1519785_1521318_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_042676197.1|1521924_1522155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173361959.1|1522216_1522939_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_007968252.1|1523077_1523458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411789.1|1523665_1525081_+	amino acid permease	NA	NA	NA	NA	NA
WP_007968246.1|1529577_1530789_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_007968244.1|1531022_1532192_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.0	6.9e-43
WP_007968242.1|1532217_1533528_-	MFS transporter	NA	NA	NA	NA	NA
WP_007968240.1|1534006_1535245_-	dipeptidase	NA	NA	NA	NA	NA
WP_007968237.1|1535532_1535853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007968235.1|1535971_1537138_-	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
WP_007968233.1|1537403_1538360_+	TerC family protein	NA	K4F9T9	Cronobacter_phage	31.4	1.3e-31
WP_007968232.1|1538692_1539478_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_033481512.1|1539597_1540692_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_007968225.1|1540931_1543232_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007968223.1|1543423_1544281_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_007968221.1|1544441_1545782_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_007968219.1|1547358_1549083_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_007968218.1|1549108_1549546_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_002805908.1|1549584_1549725_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_007968215.1|1549967_1551296_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_007968213.1|1551572_1552673_+	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	37.3	1.4e-53
WP_007968211.1|1553733_1554840_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_088411791.1|1554954_1557399_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	3.2e-114
WP_007968208.1|1557466_1558303_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 4
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	1585773	1635047	4926567	transposase,tRNA	Ralstonia_phage(66.67%)	38	NA	NA
WP_007969091.1|1585773_1586736_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_162829050.1|1587714_1587864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007963330.1|1588732_1590607_+	S8/S53 family peptidase	NA	NA	NA	NA	NA
WP_007963331.1|1590715_1591222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007963334.1|1592133_1593081_-	mitochondrial fission ELM1 family protein	NA	NA	NA	NA	NA
WP_007963336.1|1593214_1593805_+	malonic semialdehyde reductase	NA	NA	NA	NA	NA
WP_007963340.1|1594036_1594780_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_042674942.1|1595310_1596582_+	histidine-type phosphatase	NA	NA	NA	NA	NA
WP_007963342.1|1596664_1597459_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_007963343.1|1597772_1598309_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_007963345.1|1598496_1600143_+	malonate decarboxylase subunit alpha	NA	NA	NA	NA	NA
WP_005914105.1|1600152_1600470_+	malonate decarboxylase acyl carrier protein	NA	NA	NA	NA	NA
WP_172955892.1|1600606_1601509_+	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA	NA
WP_007962423.1|1601499_1602204_+	biotin-independent malonate decarboxylase subunit gamma	NA	NA	NA	NA	NA
WP_007962432.1|1602206_1602848_+	malonate decarboxylase holo-[acyl-carrier-protein] synthase	NA	NA	NA	NA	NA
WP_007962434.1|1602844_1603714_+	triphosphoribosyl-dephospho-CoA synthase MdcB	NA	NA	NA	NA	NA
WP_101062189.1|1603710_1603944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007962436.1|1603940_1604861_+	malonate decarboxylase subunit epsilon	NA	NA	NA	NA	NA
WP_007962438.1|1604948_1606304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411795.1|1606382_1607102_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007962444.1|1607251_1607875_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_007962633.1|1608338_1608758_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_007969522.1|1608754_1609186_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_042674705.1|1609182_1611243_-	SpoIIE family protein phosphatase	NA	NA	NA	NA	NA
WP_040966309.1|1611426_1612026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007962639.1|1612022_1613345_+	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
WP_007962641.1|1613761_1614763_+	glycosyl hydrolase 53 family protein	NA	NA	NA	NA	NA
WP_007962643.1|1615176_1617864_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_007969091.1|1617929_1618892_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_123768303.1|1619070_1619532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1619545_1620508_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007962339.1|1620724_1622539_-	type II/IV secretion system protein	NA	NA	NA	NA	NA
WP_007962341.1|1622629_1623538_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_007962343.1|1623739_1625902_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_007962146.1|1627317_1628298_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_007969091.1|1629986_1630949_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_087945312.1|1631202_1632425_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007962146.1|1634066_1635047_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
>prophage 5
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	1879026	2002852	4926567	transposase,protease	Burkholderia_virus(30.77%)	90	NA	NA
WP_007969091.1|1879026_1879989_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|1880981_1881944_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_099802644.1|1882328_1882682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007964895.1|1882696_1884178_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007964894.1|1884299_1888772_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
WP_022557799.1|1888974_1889355_-	proteinase inhibitor	NA	NA	NA	NA	NA
WP_007964890.1|1889502_1890690_+	DNA topoisomerase IB	NA	A0A0U2TSJ7	Niemeyer_virus	35.4	1.0e-41
WP_003482129.1|1890906_1891251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173361939.1|1891678_1892077_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
WP_007964885.1|1892080_1893823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042675361.1|1895027_1895537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964877.1|1896891_1897677_-	DUF1868 domain-containing protein	NA	NA	NA	NA	NA
WP_007964875.1|1897688_1900346_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_042675359.1|1900448_1901606_+	ROK family protein	NA	NA	NA	NA	NA
WP_007964871.1|1901795_1903940_+	avirulence protein	NA	NA	NA	NA	NA
WP_088411810.1|1904427_1905897_-	ribonuclease H-like domain-containing protein	NA	NA	NA	NA	NA
WP_007964866.1|1905893_1908389_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	35.1	1.5e-07
WP_029818121.1|1908566_1909229_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_029818122.1|1909294_1909552_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_042675357.1|1909539_1909839_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_007964861.1|1910017_1910917_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007964860.1|1910976_1911714_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007964858.1|1911839_1912751_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042675364.1|1912965_1914039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675354.1|1914616_1915333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042675353.1|1915555_1916173_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_173647344.1|1916655_1917042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969100.1|1917032_1918013_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.3e-98
WP_087945312.1|1918961_1920184_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007969091.1|1921095_1922058_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_087945312.1|1924607_1925830_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_098477673.1|1926032_1927134_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_088411818.1|1927446_1928073_-	dihydrofolate reductase family protein	NA	NA	NA	NA	NA
WP_078583388.1|1928135_1928543_-	VOC family protein	NA	NA	NA	NA	NA
WP_162269303.1|1929055_1929277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411822.1|1929401_1929851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1930290_1931253_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042674613.1|1932680_1932869_-	CsbD family protein	NA	NA	NA	NA	NA
WP_042674612.1|1933111_1934272_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_042674615.1|1934484_1935015_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_005917446.1|1935317_1935629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962350.1|1936807_1937464_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_033481677.1|1937697_1938168_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_088412081.1|1938451_1942174_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_007962293.1|1942557_1942956_+	host attachment protein	NA	NA	NA	NA	NA
WP_007962294.1|1942976_1943306_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_007962295.1|1943838_1945329_+	glycine betaine/L-proline transporter ProP	NA	Q6JIH2	Burkholderia_virus	31.4	1.4e-53
WP_007969091.1|1945898_1946861_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042674425.1|1947387_1948179_+	EcsC family protein	NA	NA	NA	NA	NA
WP_108702685.1|1948356_1949013_+	DUF938 domain-containing protein	NA	NA	NA	NA	NA
WP_042674423.1|1949263_1951045_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_162269304.1|1951202_1953461_-	DUF4175 domain-containing protein	NA	NA	NA	NA	NA
WP_007962714.1|1953457_1954657_-	BatA domain-containing protein	NA	NA	NA	NA	NA
WP_007962713.1|1954700_1955597_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_007962712.1|1955611_1956604_-	MoxR family ATPase	NA	NA	NA	NA	NA
WP_007962711.1|1956735_1957554_-	DUF4159 domain-containing protein	NA	NA	NA	NA	NA
WP_007962710.1|1957550_1958885_-	TldD/PmbA family protein	NA	NA	NA	NA	NA
WP_042674732.1|1958899_1960534_-	TldD/PmbA family protein	NA	NA	NA	NA	NA
WP_007962708.1|1961226_1962855_-	TldD/PmbA family protein	NA	NA	NA	NA	NA
WP_007962146.1|1963006_1963987_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_007964720.1|1964101_1966882_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007964722.1|1967167_1968190_+	sugar kinase	NA	NA	NA	NA	NA
WP_007964724.1|1968769_1969978_-	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA	NA
WP_007964725.1|1970259_1973607_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_007964727.1|1973603_1974002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042675311.1|1974140_1974689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007964731.1|1974977_1975376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003489973.1|1975960_1976593_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_042675313.1|1976589_1977789_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_007964740.1|1979357_1980524_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA	NA
WP_007964742.1|1980660_1981620_-	Ku protein	NA	NA	NA	NA	NA
WP_080720923.1|1981619_1981928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022557861.1|1982169_1982349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964745.1|1982454_1982850_-	DUF779 domain-containing protein	NA	NA	NA	NA	NA
WP_007964747.1|1983027_1984557_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_042675317.1|1984940_1985453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675319.1|1985648_1985945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675321.1|1986151_1988290_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	40.9	1.1e-67
WP_016849085.1|1988446_1989649_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_007969057.1|1990324_1991287_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_088411824.1|1991912_1992620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|1992682_1993645_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|1993935_1994898_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007962052.1|1995491_1996502_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	36.9	1.8e-47
WP_049963129.1|1996824_1997292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007962146.1|1997741_1998722_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_173647345.1|1998825_1999110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088411826.1|1999125_1999542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_098477673.1|1999701_2000804_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_087945312.1|2001630_2002852_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
>prophage 6
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	2722768	2796383	4926567	transposase,protease	uncultured_Mediterranean_phage(18.18%)	58	NA	NA
WP_007962455.1|2722768_2723896_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_007962453.1|2723895_2724759_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_042674638.1|2724981_2725446_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_005913957.1|2726185_2727478_+	adenylosuccinate synthase	NA	A0A2R8FF47	Brazilian_cedratvirus	38.4	5.8e-75
WP_007962495.1|2727845_2730518_+	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.5	1.2e-77
WP_123768310.1|2730774_2730987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962497.1|2731240_2731954_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007962498.1|2732024_2732615_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007962499.1|2732978_2734025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087945312.1|2734429_2735651_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007963392.1|2737134_2737686_+	AsnC family protein	NA	NA	NA	NA	NA
WP_173361929.1|2737795_2738362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042674964.1|2738457_2738721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007963395.1|2738727_2739036_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_040964891.1|2739089_2740082_+	restriction endonuclease	NA	A0A1B1IUE7	uncultured_Mediterranean_phage	29.3	1.5e-30
WP_042674978.1|2740384_2741914_+	SAM-dependent DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	29.1	1.3e-44
WP_007963399.1|2741924_2742359_+	nucleotidyltransferase substrate binding protein	NA	NA	NA	NA	NA
WP_082332238.1|2742351_2743854_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_007963409.1|2743853_2747033_+	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	30.0	4.9e-75
WP_042674970.1|2747154_2747421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042674972.1|2747666_2749241_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
WP_042674974.1|2749649_2750426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003490630.1|2750488_2751118_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007963416.1|2751333_2752113_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_042674977.1|2752112_2752982_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_007969091.1|2753152_2754115_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042675540.1|2754382_2755861_+	glycoside hydrolase family 30 protein	NA	NA	NA	NA	NA
WP_007965521.1|2755984_2757790_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA	NA
WP_007965519.1|2757786_2758689_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	52.3	1.1e-75
WP_007965517.1|2759121_2761476_-	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
WP_007965515.1|2761751_2762732_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_042675543.1|2762679_2762862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007965513.1|2762893_2763523_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	NA	NA	NA	NA
WP_007965511.1|2763877_2765587_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007965509.1|2765583_2765889_+	UBP-type zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_007965506.1|2766050_2766797_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_007965505.1|2767089_2767728_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_007965504.1|2767984_2770513_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	34.3	6.7e-152
WP_007965502.1|2770912_2773210_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_042675538.1|2773206_2774295_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_007965498.1|2774267_2774846_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_007965496.1|2775123_2776440_+	DUF763 domain-containing protein	NA	NA	NA	NA	NA
WP_007965495.1|2776436_2777030_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_007965493.1|2777092_2777437_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_007965491.1|2777599_2778115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007965489.1|2778320_2778746_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1B3AYM0	Gordonia_phage	45.7	1.2e-08
WP_042675536.1|2778755_2778977_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003490243.1|2779126_2779732_+	repressor LexA	NA	A0A1W6JNS2	Morganella_phage	38.5	3.3e-12
WP_007965488.1|2779733_2780387_+	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_007965487.1|2780396_2781815_+	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_042675531.1|2781995_2785247_+	error-prone DNA polymerase	NA	A0A1C9LWI9	Streptomyces_phage	25.3	2.2e-86
WP_162829048.1|2785986_2786163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003490255.1|2786427_2787246_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_088411873.1|2787668_2789621_+	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
WP_007965481.1|2790323_2791169_+	transporter	NA	NA	NA	NA	NA
WP_007965479.1|2791463_2793584_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_007965478.1|2794149_2795367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007969091.1|2795420_2796383_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	3085161	3125762	4926567	transposase,integrase,tRNA,tail,plate	Stenotrophomonas_phage(47.06%)	36	3098280:3098297	3134571:3134588
WP_007972915.1|3085161_3086085_+|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_007964231.1|3086084_3087395_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_007964233.1|3087445_3089167_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_007964235.1|3089332_3090610_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_007964237.1|3090807_3091632_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_080720841.1|3091632_3092691_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_007964242.1|3092773_3094279_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_007964243.1|3094275_3094752_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_007964245.1|3094890_3096024_-	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	40.9	6.1e-28
WP_007964247.1|3096269_3096791_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_007964249.1|3096987_3098004_-	lauroyl acyltransferase	NA	NA	NA	NA	NA
WP_007964250.1|3098002_3098443_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
3098280:3098297	attL	TCAGCACCGCAGCGCCGC	NA	NA	NA	NA
WP_007964252.1|3098551_3100417_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
WP_007964253.1|3100609_3100930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964255.1|3101526_3102609_+|integrase	site-specific integrase	integrase	A0A1L7DQ84	Ralstonia_phage	38.5	5.4e-50
WP_007969091.1|3102762_3103725_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_123768311.1|3104727_3105165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087945312.1|3106063_3107286_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007962023.1|3107863_3109450_-	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_042674414.1|3109446_3109635_-	plasmid-related protein	NA	NA	NA	NA	NA
WP_007969091.1|3110046_3111009_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_123768312.1|3111228_3111684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_119866672.1|3112361_3113463_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.7	2.6e-44
WP_007962732.1|3113698_3114100_-|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	61.4	3.5e-39
WP_007962734.1|3114112_3116983_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	47.8	3.0e-196
WP_017171497.1|3117015_3117129_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	3.2e-06
WP_007962736.1|3117137_3117440_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	66.7	9.8e-26
WP_007962738.1|3117486_3117996_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	77.5	7.6e-71
WP_088411890.1|3118025_3119192_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	63.7	3.4e-135
WP_017171500.1|3119203_3119563_-	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	66.1	8.6e-37
WP_007962742.1|3119559_3120123_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	46.4	1.7e-26
WP_007962743.1|3120265_3120940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042674742.1|3121314_3123114_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	38.8	9.5e-84
WP_007962746.1|3123126_3123672_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	56.6	7.1e-51
WP_088412093.1|3123664_3124534_-|plate	baseplate J/gp47 family protein	plate	V9IQV9	Stenotrophomonas_phage	53.6	7.1e-77
WP_087945312.1|3124540_3125762_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
3134571:3134588	attR	GCGGCGCTGCGGTGCTGA	NA	NA	NA	NA
>prophage 9
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	3331482	3339505	4926567		Escherichia_phage(42.86%)	7	NA	NA
WP_088411908.1|3331482_3332538_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	45.3	2.4e-79
WP_088411910.1|3332589_3333477_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	57.8	1.1e-93
WP_007962670.1|3333473_3334031_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.3	3.9e-44
WP_007962671.1|3334027_3334927_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.2	4.1e-27
WP_007962672.1|3335267_3336434_+	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.4	1.2e-116
WP_007962673.1|3336708_3338112_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.8	4.2e-47
WP_005913455.1|3338158_3339505_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	27.1	7.5e-33
>prophage 10
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	3433679	3595326	4926567	transposase,tRNA,protease	Bacillus_phage(15.62%)	117	NA	NA
WP_007966672.1|3433679_3434288_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_005911777.1|3434594_3434783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675912.1|3435009_3435279_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_007966673.1|3435330_3436176_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA	NA
WP_007966674.1|3436242_3436743_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_173647348.1|3436975_3439174_-	M3 family metallopeptidase	NA	A0A1V0SID3	Klosneuvirus	27.4	6.2e-45
WP_007966677.1|3439548_3440034_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	35.5	4.0e-13
WP_007966679.1|3440183_3440963_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_007966682.1|3441184_3443065_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.5	4.7e-25
WP_007966683.1|3443362_3444880_+	fumarate hydratase	NA	NA	NA	NA	NA
WP_007966684.1|3445121_3445757_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_042675900.1|3446445_3447561_-	phospholipase A	NA	NA	NA	NA	NA
WP_007966686.1|3447818_3448304_-	DUF456 domain-containing protein	NA	NA	NA	NA	NA
WP_003483561.1|3448531_3448747_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	5.0e-16
WP_007966687.1|3448885_3449365_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_007966688.1|3449497_3449926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007966689.1|3450000_3450831_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_007966690.1|3450883_3451651_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_017158523.1|3451650_3451866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675902.1|3452011_3452803_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_042675903.1|3452948_3454124_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_042675914.1|3454186_3456748_+	DUF3857 domain-containing protein	NA	NA	NA	NA	NA
WP_007966694.1|3456873_3457512_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_007966696.1|3457696_3459637_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	29.8	4.0e-27
WP_007966698.1|3459806_3460361_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	38.7	5.6e-19
WP_003483586.1|3460582_3462013_+	replicative DNA helicase	NA	O80281	Escherichia_phage	53.9	1.3e-120
WP_042675906.1|3462118_3463537_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SIL2	Klosneuvirus	31.2	6.0e-49
WP_007966703.1|3463817_3464543_+	OmpA family protein	NA	NA	NA	NA	NA
WP_005925689.1|3465227_3466262_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_022559676.1|3466390_3466618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033481548.1|3466614_3467388_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007972096.1|3467384_3468575_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_088411923.1|3468753_3471930_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	24.2	5.3e-05
WP_007966711.1|3471970_3472702_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007966712.1|3472695_3474120_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_007966713.1|3474376_3475351_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.6	1.4e-20
WP_042675909.1|3475445_3475751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042675916.1|3477792_3478029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108702703.1|3478453_3479707_-	asparagine synthase	NA	NA	NA	NA	NA
WP_157834425.1|3479630_3480233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042675910.1|3481981_3482260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007966718.1|3482518_3483382_+	excinuclease Cho	NA	NA	NA	NA	NA
WP_007966719.1|3483567_3484311_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	52.0	2.8e-66
WP_007966720.1|3484326_3485862_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	41.6	4.4e-98
WP_042675911.1|3486123_3486411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007966722.1|3486479_3487544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007966723.1|3487897_3488776_+	type III secretion system effector protein	NA	NA	NA	NA	NA
WP_007969091.1|3490408_3491371_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_157883120.1|3491786_3491942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962149.1|3493855_3494350_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_162056547.1|3494384_3495317_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_082332193.1|3495388_3498151_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_087945312.1|3498323_3499545_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_088411927.1|3499684_3499873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411929.1|3500445_3503466_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	29.1	8.9e-10
WP_007969091.1|3503591_3504554_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_173647350.1|3504557_3505511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411933.1|3505491_3506469_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.3	2.3e-100
WP_007969091.1|3506459_3507422_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969100.1|3511308_3512289_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.3e-98
WP_007963301.1|3514114_3515206_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_007963298.1|3516762_3517443_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA	NA
WP_007963297.1|3517621_3519541_-	amylosucrase	NA	NA	NA	NA	NA
WP_007963296.1|3519575_3522032_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007963282.1|3522298_3523618_+	MFS transporter	NA	NA	NA	NA	NA
WP_007963280.1|3523744_3524776_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_007962146.1|3524935_3525916_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_007962607.1|3526176_3526917_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_082332205.1|3527054_3528440_-	CitMHS family transporter	NA	NA	NA	NA	NA
WP_022558507.1|3528609_3529803_-	phosphate porin	NA	NA	NA	NA	NA
WP_007962611.1|3530069_3530771_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_007962612.1|3530763_3532149_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	24.3	1.7e-11
WP_022558508.1|3532148_3533198_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_007964517.1|3533504_3534143_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_042675250.1|3534272_3534641_-	Atu4866 domain-containing protein	NA	NA	NA	NA	NA
WP_007964513.1|3534652_3535198_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_007964511.1|3535214_3536285_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_007964509.1|3536596_3537499_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042675257.1|3537490_3538258_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_007964507.1|3538266_3539616_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.5	6.3e-64
WP_007964506.1|3539917_3542563_-	PAS-domain containing protein	NA	A0A2K9L5I4	Tupanvirus	28.0	9.9e-13
WP_007964505.1|3542956_3544129_-	porin	NA	NA	NA	NA	NA
WP_007964504.1|3544412_3545786_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_007964503.1|3545984_3548294_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_042675249.1|3548631_3551973_-	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
WP_007964501.1|3552396_3552753_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_088412097.1|3553247_3554468_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_007969091.1|3554481_3555444_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_098477673.1|3556189_3557292_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_007964661.1|3559048_3561496_+	S8 family serine peptidase	NA	A0A218KC60	Bacillus_phage	27.5	2.7e-12
WP_005913721.1|3561638_3562142_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	41.2	9.9e-23
WP_005913723.1|3562202_3562634_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_033481319.1|3562635_3562923_+	RnfH family protein	NA	NA	NA	NA	NA
WP_007964666.1|3563192_3563588_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_005988392.1|3563692_3564103_+	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
WP_007964676.1|3564487_3566152_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_033481318.1|3566289_3567321_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_003483633.1|3567421_3567940_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_003483635.1|3568081_3570007_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.6	2.9e-147
WP_003483637.1|3570167_3571295_+	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	30.3	4.8e-25
WP_007964681.1|3571823_3572732_+	pyridoxal kinase	NA	NA	NA	NA	NA
WP_007964683.1|3572728_3573850_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_022559665.1|3574131_3574326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007973256.1|3574778_3576182_-	TolC family protein	NA	NA	NA	NA	NA
WP_007964689.1|3576178_3577264_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_007964691.1|3577247_3578936_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_007964693.1|3579025_3579925_-	hydrogen peroxide-inducible genes activator	NA	A0A2P0ZL89	Lactobacillus_phage	26.8	1.6e-07
WP_007964695.1|3580166_3581936_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.2	1.8e-58
WP_033481316.1|3581932_3582535_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	42.0	7.4e-17
WP_022559660.1|3582756_3583350_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	28.0	2.7e-11
WP_007964701.1|3583564_3585007_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.8	2.2e-38
WP_007964703.1|3585118_3586333_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_173361937.1|3586375_3589279_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_007964706.1|3589384_3590314_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_173361938.1|3590310_3591771_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_087945312.1|3592356_3593578_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_087945312.1|3594104_3595326_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
>prophage 11
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	3804998	3815782	4926567	tRNA	Micromonas_pusilla_virus(16.67%)	7	NA	NA
WP_007966769.1|3804998_3806675_+	2-polyprenylphenol 6-hydroxylase	NA	G8DDN0	Micromonas_pusilla_virus	29.4	1.9e-41
WP_007966767.1|3806762_3807404_+	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
WP_003481871.1|3807576_3808611_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.3	5.1e-114
WP_007966764.1|3808923_3809412_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_007966762.1|3809513_3812162_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.0	9.7e-85
WP_003481884.1|3812301_3812514_+	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
WP_042675932.1|3813823_3815782_+	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.0	1.6e-12
>prophage 12
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	3997872	4072005	4926567	transposase	uncultured_Caudovirales_phage(33.33%)	53	NA	NA
WP_007969091.1|3997872_3998835_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007962534.1|4000802_4001564_-	transporter	NA	NA	NA	NA	NA
WP_042674664.1|4001866_4004656_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	47.8	1.3e-10
WP_007962532.1|4004728_4006906_-	cache domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	62.1	2.4e-09
WP_042674662.1|4007084_4007291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033481115.1|4007438_4007972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042674659.1|4008290_4010582_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.7	1.5e-09
WP_022559103.1|4010822_4012832_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_002806565.1|4012865_4013231_-	response regulator	NA	W8CYM9	Bacillus_phage	39.3	2.7e-14
WP_003489692.1|4013227_4013536_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_088411959.1|4013638_4014913_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_003489696.1|4014909_4015692_-	ParA family protein	NA	Q8JL10	Natrialba_phage	37.1	5.9e-14
WP_005931860.1|4015693_4016668_-	flagellar motor protein MotD	NA	NA	NA	NA	NA
WP_005914940.1|4016674_4017415_-	flagellar motor protein	NA	NA	NA	NA	NA
WP_173361923.1|4018616_4021772_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007969091.1|4021909_4022872_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_123768316.1|4023177_4023624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087945312.1|4023586_4024808_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007969091.1|4026647_4027610_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_088411963.1|4027635_4029051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162269307.1|4029320_4029767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411967.1|4029763_4030180_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
WP_088412105.1|4030266_4030959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088412107.1|4031045_4031684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088411969.1|4031698_4033177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173647351.1|4033261_4033723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007970781.1|4034087_4035746_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_022559105.1|4035748_4036375_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_002813536.1|4036374_4036767_-	chemotaxis protein CheY	NA	NA	NA	NA	NA
WP_005918198.1|4036789_4037557_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005918202.1|4037553_4038438_-	MinD/ParA family protein	NA	NA	NA	NA	NA
WP_088411971.1|4038424_4040116_-	flagellar biosynthesis protein FlhF	NA	NA	NA	NA	NA
WP_029819345.1|4041051_4043124_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA	NA
WP_007970795.1|4043141_4044272_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_088411973.1|4044411_4046499_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	34.3	1.5e-19
WP_119866674.1|4046769_4049529_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.0	3.3e-11
WP_088411976.1|4053204_4053996_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_005917968.1|4054009_4054279_-	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
WP_007969091.1|4055114_4056077_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969680.1|4056263_4057109_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_088411978.1|4057110_4057518_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_007969679.1|4057514_4057853_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_005917976.1|4057849_4058863_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_022559112.1|4058873_4059425_-	flagellar basal body-associated FliL family protein	NA	NA	NA	NA	NA
WP_088411980.1|4059590_4060883_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_005918178.1|4060879_4061335_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_088411981.1|4061338_4062715_-	FliI/YscN family ATPase	NA	NA	NA	NA	NA
WP_005918165.1|4062711_4063332_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_005918162.1|4063328_4064318_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_088370806.1|4064328_4066053_-	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_007969671.1|4066066_4066438_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_088411983.1|4067026_4070524_-	glycosyltransferase	NA	K7QL84	Escherichia_phage	25.8	1.7e-12
WP_007969091.1|4071042_4072005_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	4230076	4275989	4926567	transposase	Burkholderia_virus(33.33%)	30	NA	NA
WP_087945312.1|4230076_4231298_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007964421.1|4232058_4233918_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_005916703.1|4233914_4234547_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_007964425.1|4235511_4236804_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
WP_007964427.1|4236787_4238050_-	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
WP_007964429.1|4238060_4238492_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_007964431.1|4238551_4238917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964432.1|4239016_4239763_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_003489223.1|4240002_4240650_+	response regulator	NA	NA	NA	NA	NA
WP_007964440.1|4245237_4246224_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_007964442.1|4246256_4248068_-	DUF3300 domain-containing protein	NA	NA	NA	NA	NA
WP_007964444.1|4248361_4249180_-	zinc transporter ZupT	NA	NA	NA	NA	NA
WP_042675236.1|4249445_4249868_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_003489213.1|4249864_4250221_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_007964449.1|4250309_4250909_+	NfuA family Fe-S biogenesis protein	NA	NA	NA	NA	NA
WP_042675237.1|4250922_4252755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007964453.1|4253715_4254132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007964456.1|4255014_4256085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007964457.1|4256169_4257447_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_007964459.1|4257578_4260572_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	27.7	3.1e-87
WP_007964464.1|4262034_4263090_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_007969091.1|4263242_4264205_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|4265009_4265972_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_082332197.1|4267342_4271491_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_007962306.1|4271698_4272064_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_007962305.1|4272041_4272695_-	phophatidylserine decarboxylase associated domain-containing protein	NA	NA	NA	NA	NA
WP_088412001.1|4272727_4273570_-	putative DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_007969100.1|4273585_4274566_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.3e-98
WP_088412003.1|4274680_4274968_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_007969091.1|4275026_4275989_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	4548162	4627944	4926567	transposase,tRNA	uncultured_Mediterranean_phage(50.0%)	48	NA	NA
WP_007969091.1|4548162_4549125_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_042674456.1|4550007_4550286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007972339.1|4550275_4552624_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA	NA
WP_007962087.1|4552620_4553466_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_005915324.1|4553472_4555152_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_039731973.1|4557616_4558471_+	plasmid replication/partition related protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	39.8	6.4e-14
WP_007962779.1|4558701_4560006_+	DUF445 family protein	NA	NA	NA	NA	NA
WP_007962777.1|4560150_4564245_+	response regulator	NA	A0A1V0SGX0	Hokovirus	28.9	1.6e-57
WP_007962775.1|4564278_4565265_+	response regulator	NA	W8CYM9	Bacillus_phage	27.6	1.3e-05
WP_007962773.1|4565828_4567256_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_042674747.1|4567420_4568170_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088412031.1|4568084_4572041_-	AHH domain-containing protein	NA	NA	NA	NA	NA
WP_007962168.1|4572956_4573355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017154836.1|4573591_4573891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088412033.1|4574393_4579406_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_007962520.1|4579684_4580344_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007962519.1|4580358_4581663_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_007962513.1|4581675_4584846_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_005917351.1|4585183_4586179_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_007962510.1|4586340_4588857_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	29.3	6.7e-11
WP_022559388.1|4588853_4589810_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_088412035.1|4589962_4591690_+	PTS fructose transporter subunit EIIBC	NA	NA	NA	NA	NA
WP_098477673.1|4591856_4592959_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_123768320.1|4593215_4593713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007966423.1|4594013_4594676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088412037.1|4595175_4596144_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	29.5	2.0e-27
WP_162269308.1|4596203_4598048_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003489768.1|4598238_4598592_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_007961996.1|4598723_4599869_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.9	3.8e-86
WP_007969723.1|4599938_4601009_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_007962401.1|4601174_4601606_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_007962400.1|4601728_4603225_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_007962399.1|4603573_4604281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042674623.1|4606020_4607142_-	phytase	NA	NA	NA	NA	NA
WP_042674622.1|4607138_4609697_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_005931906.1|4609848_4610481_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_087945312.1|4610697_4611920_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_088412041.1|4612096_4613857_-	glycoside hydrolase family 9 protein	NA	NA	NA	NA	NA
WP_007962794.1|4614146_4615925_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003489796.1|4615921_4616206_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.0	1.1e-18
WP_005931897.1|4616437_4616935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005917071.1|4616981_4617488_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	6.2e-25
WP_173361924.1|4617484_4618174_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_007962789.1|4618347_4620252_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.7	1.0e-112
WP_119866675.1|4621226_4624541_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_007969091.1|4624531_4625494_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_087945312.1|4625554_4626776_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007969091.1|4626981_4627944_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP012002	Xanthomonas citri pv. aurantifolii strain 1566 chromosome, complete genome	4926567	4711916	4741110	4926567	transposase,tRNA	Tupanvirus(28.57%)	19	NA	NA
WP_007966006.1|4711916_4714295_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_007966007.1|4714409_4715405_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	35.6	3.0e-31
WP_003484828.1|4715655_4716015_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002811096.1|4716025_4716223_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_077708941.1|4716469_4717012_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	35.2	1.5e-13
WP_007966011.1|4717060_4718965_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.3	6.2e-126
WP_007966013.1|4719286_4720408_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	26.7	2.2e-14
WP_007969091.1|4720873_4721836_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_007969091.1|4723957_4724920_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_087945312.1|4725655_4726877_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	6.6e-105
WP_007962224.1|4727242_4728916_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_088409529.1|4728952_4729147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007962222.1|4730065_4732087_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_007962146.1|4732745_4733726_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.6	1.8e-100
WP_098477673.1|4733783_4734886_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.6	1.3e-43
WP_007971438.1|4735319_4735727_-	type IV pilin protein	NA	NA	NA	NA	NA
WP_007962096.1|4735759_4739506_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_007971436.1|4739516_4740044_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_007969091.1|4740147_4741110_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
