The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	1130842	1135911	4939234		Mycobacterium_phage(83.33%)	7	NA	NA
WP_062914855.1|1130842_1131865_-	acyltransferase	NA	A9YX16	Burkholderia_phage	29.1	3.3e-25
WP_062914856.1|1132084_1132813_+	hypothetical protein	NA	A0A068F4L5	Mycobacterium_phage	53.0	8.1e-58
WP_062914857.1|1132799_1133237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062914982.1|1133450_1133771_+	helix-turn-helix transcriptional regulator	NA	A0A2D1GA98	Mycobacterium_phage	56.6	4.1e-22
WP_062914859.1|1134096_1134933_+	hypothetical protein	NA	A0A0K1LSM7	Mycobacterium_phage	56.0	3.1e-69
WP_062914860.1|1134925_1135723_+	hypothetical protein	NA	A0A0K1LRE4	Mycobacterium_phage	88.3	1.4e-140
WP_005059188.1|1135719_1135911_+	hypothetical protein	NA	A0A2D1GAF3	Mycobacterium_phage	66.7	7.8e-13
>prophage 2
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	1140739	1195570	4939234	portal,integrase,terminase,tail	Mycobacterium_phage(79.59%)	67	1169557:1169571	1198241:1198255
WP_079729071.1|1140739_1141372_+	hypothetical protein	NA	G1D0U2	Mycobacterium_virus	35.5	3.4e-20
WP_062914867.1|1141368_1142988_+	site-specific DNA-methyltransferase	NA	A0A2P1JRA9	Mycobacterium_phage	63.1	1.3e-193
WP_062914868.1|1143127_1143691_+	hypothetical protein	NA	A0A160DEM6	Gordonia_phage	44.8	2.9e-47
WP_062914869.1|1144171_1144960_+	hypothetical protein	NA	A0A142KB23	Gordonia_phage	48.3	1.5e-54
WP_062914870.1|1144956_1145730_+	hypothetical protein	NA	A0A222ZKS9	Mycobacterium_phage	34.3	2.6e-22
WP_062914871.1|1145726_1146080_+	hypothetical protein	NA	A0A2L0HJY8	Mycobacterium_phage	57.1	1.9e-28
WP_062914872.1|1146178_1146364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074359886.1|1147798_1148581_+	hypothetical protein	NA	A0A2D1GG45	Gordonia_phage	47.5	2.2e-16
WP_032670028.1|1148810_1149029_+	hypothetical protein	NA	G1JX72	Mycobacterium_phage	47.4	2.1e-09
WP_005067380.1|1149025_1149355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062878846.1|1150016_1150265_+	WhiB family transcriptional regulator	NA	A0A097EWF7	Mycobacterium_phage	50.0	2.4e-14
WP_065209293.1|1150264_1150579_+	WhiB family transcriptional regulator	NA	A0A1B0XUI6	Freshwater_phage	50.0	2.4e-14
WP_131819820.1|1150937_1151222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131819819.1|1151214_1151517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914877.1|1151513_1151780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914878.1|1151783_1152461_+	hypothetical protein	NA	M4WA13	Mycobacterium_phage	55.0	4.0e-67
WP_062878852.1|1152495_1152753_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_062878853.1|1152834_1153095_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2P1N333	Gordonia_phage	51.2	6.0e-16
WP_062914879.1|1153378_1153699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079633922.1|1153737_1153971_+	hypothetical protein	NA	A0A088FBL5	Mycobacterium_phage	92.3	2.5e-05
WP_005115852.1|1153967_1154243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074245347.1|1154896_1155493_+	HNH endonuclease	NA	T2AAH7	Mycobacterium_phage	46.9	2.4e-36
WP_062914881.1|1155495_1156770_+	glycosyltransferase	NA	G8I6V8	Mycobacterium_virus	70.9	8.0e-69
WP_062914882.1|1156776_1157598_+	hypothetical protein	NA	A0A2D1GAR3	Mycobacterium_phage	55.9	8.2e-83
WP_074359921.1|1157606_1158290_+	hypothetical protein	NA	A0A0A1ENE4	Mycobacterium_phage	72.1	2.4e-88
WP_062914884.1|1158289_1158535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914885.1|1158534_1158951_+	hypothetical protein	NA	A0A068F2M6	Mycobacterium_phage	49.6	1.1e-22
WP_074359920.1|1159316_1159889_+	hypothetical protein	NA	A0A2P1JRF0	Mycobacterium_phage	47.0	1.5e-46
WP_024571079.1|1159888_1160173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571080.1|1160156_1160504_+	HNH endonuclease	NA	G1BSJ4	Mycobacterium_virus	42.4	9.9e-06
WP_005114206.1|1160633_1161092_+	hypothetical protein	NA	A0A0A0RSN6	Mycobacterium_phage	70.2	5.2e-55
WP_062914887.1|1161099_1162752_+|terminase	large terminase	terminase	A0A0S1S0L0	Mycobacterium_phage	74.1	1.2e-250
WP_062914888.1|1162770_1164135_+|portal	phage portal protein	portal	A0A1C9LZY2	Mycobacterium_phage	67.0	4.5e-171
WP_062914984.1|1164185_1164800_+	hypothetical protein	NA	A0A088FVU5	Mycobacterium_phage	47.6	6.6e-29
WP_062914889.1|1164821_1165652_+	hypothetical protein	NA	A0A0A0RSP1	Mycobacterium_phage	59.8	5.9e-81
WP_005137062.1|1165651_1166224_+	hypothetical protein	NA	A0A1C9M013	Mycobacterium_phage	51.1	2.9e-42
WP_074359885.1|1166220_1166556_+	hypothetical protein	NA	G8I4C3	Mycobacterium_phage	39.3	2.3e-15
WP_062914890.1|1166555_1166822_+	hypothetical protein	NA	A0A068F3C1	Mycobacterium_phage	51.2	4.0e-15
WP_062914891.1|1166821_1167199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914892.1|1167265_1167853_+	hypothetical protein	NA	A0A068F8K4	Mycobacterium_phage	67.7	5.7e-70
WP_016342254.1|1167947_1168214_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	44.7	2.9e-13
WP_005067420.1|1168330_1168642_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	43.7	4.0e-14
WP_062914893.1|1168652_1172663_+|tail	phage tail tape measure protein	tail	A0A068F1L4	Mycobacterium_phage	54.9	7.4e-270
1169557:1169571	attL	CCGGACAAGCTGCCG	NA	NA	NA	NA
WP_062914894.1|1172662_1173766_+	hypothetical protein	NA	A0A068F3C3	Mycobacterium_phage	67.0	1.9e-151
WP_062914895.1|1173768_1175565_+	hypothetical protein	NA	A0A068F4H3	Mycobacterium_phage	63.3	6.9e-236
WP_005115854.1|1175579_1176098_+	hypothetical protein	NA	A0A068F2D2	Mycobacterium_phage	49.1	6.2e-36
WP_005110315.1|1176090_1177176_+|tail	tail protein	tail	A0A068F8L3	Mycobacterium_phage	67.8	1.4e-151
WP_062914896.1|1177175_1181291_+	serine hydrolase	NA	A0A0K1LLJ4	Mycobacterium_phage	40.4	1.0e-149
WP_062914897.1|1181301_1181700_+	hypothetical protein	NA	Q19Y14	Mycobacterium_phage	49.6	1.8e-27
WP_052537756.1|1181702_1182923_+	hypothetical protein	NA	G3MDN1	Mycobacterium_phage	41.4	5.2e-25
WP_005059268.1|1182938_1183376_+	hypothetical protein	NA	A0A2P1JR64	Mycobacterium_phage	73.9	4.2e-54
WP_062914899.1|1184898_1185315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914985.1|1185365_1186280_+	hypothetical protein	NA	A0A2P1CCW0	Mycobacterium_phage	44.4	1.6e-55
WP_074319396.1|1186276_1186495_-	hypothetical protein	NA	A0A2P1JRC2	Mycobacterium_phage	67.2	3.6e-14
WP_153995356.1|1186461_1186635_-	hypothetical protein	NA	G1D4G1	Mycobacterium_virus	47.1	9.9e-07
WP_074270065.1|1186945_1188142_+	hypothetical protein	NA	S5W0N6	Mycobacterium_phage	56.2	2.7e-119
WP_062914900.1|1188167_1188392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062914901.1|1188395_1188713_-	hypothetical protein	NA	R4TBK1	Mycobacterium_phage	42.7	8.4e-12
WP_032689846.1|1189125_1189368_+	hypothetical protein	NA	A0A222ZL12	Mycobacterium_phage	41.6	3.3e-08
WP_005067440.1|1189403_1189766_+	hypothetical protein	NA	A0A222ZMV8	Mycobacterium_phage	53.8	7.1e-23
WP_062914902.1|1189804_1190089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052537752.1|1190187_1191447_-|integrase	site-specific integrase	integrase	A0A2D1G9S9	Mycobacterium_phage	69.7	1.4e-174
WP_005136845.1|1191751_1192810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005066482.1|1192871_1193054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005066483.1|1193195_1193426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005066484.1|1193422_1194190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005066485.1|1194196_1195570_-|integrase	site-specific integrase	integrase	A0A0E3XBN7	Gordonia_phage	25.7	3.5e-14
1198241:1198255	attR	CGGCAGCTTGTCCGG	NA	NA	NA	NA
>prophage 3
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	2562694	2572775	4939234	integrase,transposase	Leptospira_phage(50.0%)	9	2551215:2551230	2576301:2576316
2551215:2551230	attL	GGCGGCGTCGAGTGCG	NA	NA	NA	NA
WP_005068399.1|2562694_2564746_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_024571248.1|2564742_2565498_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_005068404.1|2566091_2567213_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	21.0	2.3e-11
WP_024571249.1|2567205_2567571_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_062914938.1|2567548_2569006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005068421.1|2569082_2569307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005068424.1|2569382_2570645_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_024571251.1|2570724_2571969_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_005068429.1|2571968_2572775_+|transposase	transposase	transposase	U5N3V8	Enterobacteria_phage	44.2	2.7e-54
2576301:2576316	attR	CGCACTCGACGCCGCC	NA	NA	NA	NA
>prophage 4
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	2860479	2869038	4939234		Streptococcus_phage(16.67%)	7	NA	NA
WP_005068898.1|2860479_2861151_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
WP_005057567.1|2861264_2862188_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
WP_005068900.1|2862189_2863059_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	46.0	1.5e-55
WP_005068903.1|2863160_2865527_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
WP_005068905.1|2865557_2866091_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.1e-14
WP_005137446.1|2866087_2867764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016892306.1|2867763_2869038_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 5
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	4145682	4155181	4939234		Burkholderia_phage(25.0%)	9	NA	NA
WP_005071256.1|4145682_4146807_-	acyltransferase	NA	A9YX16	Burkholderia_phage	28.7	2.7e-20
WP_005071257.1|4146803_4148072_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
WP_012296730.1|4148121_4148928_-	macrocin O-methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
WP_005138043.1|4149138_4149831_-	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	3.7e-12
WP_005138044.1|4150063_4151197_-	acyltransferase	NA	A9YX16	Burkholderia_phage	26.2	7.0e-16
WP_005062162.1|4151364_4152426_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3IB24	Synechococcus_phage	25.8	1.6e-17
WP_005138046.1|4152589_4153849_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	2.1e-05
WP_079636292.1|4153991_4154291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005062166.1|4154314_4155181_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
>prophage 6
NZ_CP014959	Mycobacteroides abscessus strain FLAC048 chromosome, complete genome	4939234	4845177	4853549	4939234		Mycobacterium_phage(33.33%)	7	NA	NA
WP_074360113.1|4845177_4846647_+	serine hydrolase	NA	A0A1J0GRK9	Mycobacterium_phage	28.8	4.2e-13
WP_005082750.1|4846774_4847587_+	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	49.1	3.1e-50
WP_005138308.1|4847635_4848832_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JL93	Lactococcus_phage	47.3	2.6e-05
WP_005072022.1|4849261_4850080_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2D1GEV9	Mycobacterium_phage	55.0	3.3e-68
WP_005100873.1|4850870_4851320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079634896.1|4851340_4852792_+	HAMP domain-containing histidine kinase	NA	Q8QKV4	Ectocarpus_siliculosus_virus	26.6	1.1e-05
WP_005064635.1|4852871_4853549_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.4	4.4e-26
